RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 NONOQ15233 471 aaKnown RBP eCLIP10.46□□□□□ -0.73
PPFIA2-216ENST00000549396 HACE1Q8IYU2 909 aa10.46□□□□□ -0.73
PPFIA2-216ENST00000549396 JARID2Q92833 1246 aaPredicted RBP10.46□□□□□ -0.73
PPFIA2-216ENST00000549396 GOLGA6L10A0A0M3HER8 536 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 TDRD12Q587J7 1177 aaKnown RBP10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 AKNAD1Q5T1N1 836 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 LEKR1Q6ZMV7 388 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 CCDC82Q8N4S0 544 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 NT5C3AQ9H0P0 336 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 MAGEF1Q9HAY2 307 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 SPATA31D1Q6ZQQ2 1576 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 CARMIL3Q8ND23 1372 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 RLBP1P12271 317 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 KLHL10Q6JEL2 608 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 DHX36Q9H2U1 1008 aaKnown RBP10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 OSBPL3Q9H4L5 887 aa10.46□□□□□ -0.74
PPFIA2-216ENST00000549396 TECPR2O15040 1411 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 MYO3AQ8NEV4 1616 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 RPS6KA4O75676 772 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 CCDC93Q567U6 631 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 CEP83Q9Y592 693 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 CCDC66A2RUB6 948 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 FOSP01100 380 aaPredicted RBP10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 RBM6P78332 1123 aaKnown RBP10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 KRT26Q7Z3Y9 468 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 MIGA1Q8NAN2 632 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 UBXN4Q92575 508 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 IFT74Q96LB3 600 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 MRPL11Q9Y3B7 192 aaKnown RBP10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 CALUO43852 315 aaPredicted RBP10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 TUBB2AQ13885 445 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 TUBB2BQ9BVA1 445 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 SRRTQ9BXP5 876 aaKnown RBP10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 MED23Q9ULK4 1368 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 C1orf167Q5SNV9 1468 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 N4BP3O15049 544 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 KIF22Q14807 665 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 GNPTABQ3T906 1256 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 KDM2BQ8NHM5 1336 aa10.45□□□□□ -0.74
PPFIA2-216ENST00000549396 TCERG1LQ5VWI1 586 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 TSGA10Q9BZW7 698 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 ZNF804BA4D1E1 1349 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 NEFHP12036 1026 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 HSPA4P34932 840 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 ACTN2P35609 894 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 HS1BP3Q53T59 392 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 HELBQ8NG08 1087 aaPredicted RBP10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 SELENOOQ9BVL4 669 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 PALLDQ8WX93 1383 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 CEP170BQ9Y4F5 1589 aaPredicted RBP10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 PHACTR2O75167 634 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 RAB3GAP1Q15042 981 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 CAMK4Q16566 473 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 ZNF771Q7L3S4 317 aaPredicted RBP10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 CCDC144CPQ8IYA2 1237 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 BBXQ8WY36 941 aaPredicted RBP10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 SPAG5Q96R06 1193 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 BEGAINQ9BUH8 593 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 GJA3Q9Y6H8 435 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 ZNF532Q9HCE3 1301 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 PDE8BO95263 885 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 SUPT20HL1Q3ZLR7 823 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 PAXBP1Q9Y5B6 917 aa10.44□□□□□ -0.74
PPFIA2-216ENST00000549396 SLC1A4P43007 532 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 SSR1P43307 286 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 PPARAQ07869 468 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 C8orf34Q49A92 452 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 ARMT1Q9H993 441 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 SPC25Q9HBM1 224 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 IQSEC3Q9UPP2 1182 aaPredicted RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 LAD1O00515 517 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 YWHAEP62258 255 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 KRT24Q2M2I5 525 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 USP44Q9H0E7 712 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 RASAL2Q9UJF2 1139 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 CCNA1P78396 465 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 ZNF335Q9H4Z2 1342 aaPredicted RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 DNM2P50570 870 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 FAM160A1Q05DH4 1040 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 GPATCH4Q5T3I0 446 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 LUZP1Q86V48 1076 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 SLFN12Q8IYM2 578 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 GOLGA5Q8TBA6 731 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 DCPSQ96C86 337 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 NUP58Q9BVL2 599 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 NUCKS1Q9H1E3 243 aaKnown RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 GNA14O95837 355 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 APOBRQ0VD83 1088 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 MFSD14BQ5SR56 506 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 AXDND1Q5T1B0 1012 aaPredicted RBP10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 FCHSD1Q86WN1 690 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 KIFAP3Q92845 792 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 PKNOX2Q96KN3 472 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 USP40Q9NVE5 1235 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 HAUS2Q9NVX0 235 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 FRMD4BQ9Y2L6 1034 aa10.43□□□□□ -0.74
PPFIA2-216ENST00000549396 EPB41P11171 864 aaKnown RBP10.42□□□□□ -0.74
PPFIA2-216ENST00000549396 IRX3P78415 501 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms