RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 PDE8BO95263 885 aa13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 NFIAQ12857 509 aa13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 IRF5Q13568 498 aa13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 CDC42EP5Q6NZY7 148 aa13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 GADL1Q6ZQY3 521 aa13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 FASTKD5Q7L8L6 764 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 SUCLG2Q96I99 432 aa13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
TRAFD1-206ENST00000549358 SYN1P17600 705 aa13.6□□□□□ -0.23
TRAFD1-206ENST00000549358 EXOSC9Q06265 439 aaKnown RBP13.6□□□□□ -0.23
TRAFD1-206ENST00000549358 SMCR8Q8TEV9 937 aaPredicted RBP13.6□□□□□ -0.23
TRAFD1-206ENST00000549358 IL16Q14005 1332 aa13.6□□□□□ -0.23
TRAFD1-206ENST00000549358 A0A0G2JLL6 359 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 ALDH1L1O75891 902 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 PTPRAP18433 802 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 DIXDC1Q155Q3 683 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 LRIT3Q3SXY7 679 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 PRRT2Q7Z6L0 340 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 ZFPM1Q8IX07 1006 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 VGLL2Q8N8G2 317 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 COA7Q96BR5 231 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 COL25A1Q9BXS0 654 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 SRCIN1Q9C0H9 1055 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 PICK1Q9NRD5 415 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 USP40Q9NVE5 1235 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 MTMR10Q9NXD2 777 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
TRAFD1-206ENST00000549358 UNC80Q8N2C7 3258 aa13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 PHF20L1A8MW92 1017 aa13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 ZEB1P37275 1124 aaPredicted RBP13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 ANKRD13CQ8N6S4 541 aa13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 SLC45A1Q9Y2W3 748 aa13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 DAGLAQ9Y4D2 1042 aa13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 AFG3L2Q9Y4W6 797 aa13.58□□□□□ -0.24
TRAFD1-206ENST00000549358 IFIT1P09914 478 aaKnown RBP13.57□□□□□ -0.24
TRAFD1-206ENST00000549358 MAGEA10P43363 369 aaPredicted RBP13.57□□□□□ -0.24
TRAFD1-206ENST00000549358 TDHQ8IZJ6 230 aa13.57□□□□□ -0.24
TRAFD1-206ENST00000549358 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
TRAFD1-206ENST00000549358 WDR66Q8TBY9 1149 aa13.57□□□□□ -0.24
TRAFD1-206ENST00000549358 NBPF3Q9H094 633 aa13.57□□□□□ -0.24
TRAFD1-206ENST00000549358 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
TRAFD1-206ENST00000549358 TRIM75PA6NK02 468 aa13.56□□□□□ -0.24
TRAFD1-206ENST00000549358 PUM3Q15397 648 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-206ENST00000549358 UBE2OQ9C0C9 1292 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-206ENST00000549358 SALL2Q9Y467 1007 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-206ENST00000549358 LRRFIP2Q9Y608 721 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-206ENST00000549358 MGAMO43451 1857 aa13.56□□□□□ -0.24
TRAFD1-206ENST00000549358 SLURP2P0DP57 97 aa13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 FGFR2P21802 821 aa13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 PRDX5P30044 214 aa13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 TRIM32Q13049 653 aa13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 RABL6Q3YEC7 729 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 C11orf49Q9H6J7 331 aa13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 HMX1Q9NP08 348 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 RPTORQ8N122 1335 aa13.55□□□□□ -0.24
TRAFD1-206ENST00000549358 HMGCRP04035 888 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 LDHBP07195 334 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 RGS3P49796 1198 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 CCDC184Q52MB2 194 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 TREML2Q5T2D2 321 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 CCDC84Q86UT8 332 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 ANKRD44Q8N8A2 993 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 AGTPBP1Q9UPW5 1226 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 UTYO14607 1347 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 KIF16BQ96L93 1317 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 ATRNL1Q5VV63 1379 aa13.54□□□□□ -0.24
TRAFD1-206ENST00000549358 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-206ENST00000549358 SLC5A1P13866 664 aa13.53□□□□□ -0.24
TRAFD1-206ENST00000549358 SH3BP5LQ7L8J4 393 aa13.53□□□□□ -0.24
TRAFD1-206ENST00000549358 LPIN2Q92539 896 aa13.53□□□□□ -0.24
TRAFD1-206ENST00000549358 DDTLA6NHG4 134 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 ENTPD3O75355 529 aa13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 MAP3K10Q02779 954 aa13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 FAM110CQ1W6H9 321 aa13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 WDR63Q8IWG1 891 aa13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 IDI2Q9BXS1 227 aa13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 GJD2Q9UKL4 321 aa13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 PNMA3Q9UL41 463 aa13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 ALPK3Q96L96 1907 aa13.52□□□□□ -0.25
TRAFD1-206ENST00000549358 OGDHLQ9ULD0 1010 aa13.51□□□□□ -0.25
TRAFD1-206ENST00000549358 PFASO15067 1338 aa13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 EYA2O00167 538 aa13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 GCLCP48506 637 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 MDM2Q00987 491 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 SPP2Q13103 211 aa13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 PICALMQ13492 652 aa13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 SP7Q8TDD2 431 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 TRIB2Q92519 343 aa13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 FAM161BQ96MY7 647 aa13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 GNL3LQ9NVN8 582 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-206ENST00000549358 AK9Q5TCS8 1911 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms