RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 CCDC74AQ96AQ1 378 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 SIN3AQ96ST3 1273 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 NPHS2Q9NP85 383 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 KANSL3Q9P2N6 904 aa3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 URB2Q14146 1524 aaKnown RBP3.49□□□□□ -1.85
DEPDC4-206ENST00000549100 PTPRKQ15262 1439 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 NPIPB6E9PJ23 425 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 SORBS3O60504 671 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 MMP20O60882 483 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 NEFLP07196 543 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 CTSHP09668 335 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 CDC25BP30305 580 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 FGD1P98174 961 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 CPSF6Q16630 551 aaKnown RBP eCLIP3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 GATA6Q92908 595 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 LIN37Q96GY3 246 aaPredicted RBP3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 OSBPL7Q9BZF2 842 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 MRS2Q9HD23 443 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 C11orf16Q9NQ32 467 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 LATS2Q9NRM7 1088 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 VTI1BQ9UEU0 232 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 SLC5A6Q9Y289 635 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 PPME1Q9Y570 386 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 MAPKBP1O60336 1514 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 CARMIL1Q5VZK9 1371 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 PHLDB1Q86UU1 1377 aa3.48□□□□□ -1.85
DEPDC4-206ENST00000549100 KIF27Q86VH2 1401 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 RRBP1Q9P2E9 1410 aaKnown RBP3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 RARAP10276 462 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 ACPPP15309 386 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 FUT4P22083 530 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 CES1P23141 567 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 COL13A1Q5TAT6 717 aaPredicted RBP3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 TTC39BQ5VTQ0 682 aaPredicted RBP3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 PEAR1Q5VY43 1037 aaPredicted RBP3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 GALNT12Q8IXK2 581 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 OR13H1Q8NG92 308 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 DCAF11Q8TEB1 546 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 YTHDC1Q96MU7 727 aaKnown RBP3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 LRRC4CQ9HCJ2 640 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 HIF3AQ9Y2N7 669 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 AK5Q9Y6K8 562 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 TOPBP1Q92547 1522 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 AQRO60306 1485 aaKnown RBP eCLIP3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 POLA1P09884 1462 aaPredicted RBP3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 FANCD2Q9BXW9 1451 aa3.47□□□□□ -1.85
DEPDC4-206ENST00000549100 FHOD3Q2V2M9 1422 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 WDR97A6NE52 1622 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 LOC102724428A0A0B4J2F2 783 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 CD8BP10966 210 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 RXRBP28702 533 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 CD96P40200 585 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 NRLP54845 237 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 SIK1P57059 783 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 HDLBPQ00341 1268 aaKnown RBP3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 NFKBIBQ15653 356 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 SKOR2Q2VWA4 1001 aaPredicted RBP3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 C9orf131Q5VYM1 1079 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 NXPE4Q6UWF7 544 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 TMEM87AQ8NBN3 555 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 CRELD1Q96HD1 420 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 PPP1R16BQ96T49 567 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 METTL22Q9BUU2 404 aaPredicted RBP3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 HIRIP3Q9BW71 556 aaPredicted RBP3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 C12orf49Q9H741 205 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 NLRP2Q9NX02 1062 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 CRIM1Q9NZV1 1036 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 SALL4Q9UJQ4 1053 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 SPG7Q9UQ90 795 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 TDRD9Q8NDG6 1382 aaKnown RBP3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 PCF11O94913 1555 aaKnown RBP3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 TIAM1Q13009 1591 aa3.46□□□□□ -1.86
DEPDC4-206ENST00000549100 MAGI3Q5TCQ9 1506 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 A0A1W2PP55 124 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 SCAMP3O14828 347 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 TRPA1O75762 1119 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 KIF4AO95239 1232 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 USP17L7P0C7H9 530 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 EIF4BP23588 611 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 SOX18P35713 384 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 FANCCQ00597 558 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 GRM2Q14416 872 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 MEI1Q5TIA1 1274 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 ANKRD34AQ69YU3 496 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 PRR23BQ6ZRT6 265 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 PRRT2Q7Z6L0 340 aaPredicted RBP3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 METTL16Q86W50 562 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 KLHDC7BQ96G42 594 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 FRMD6Q96NE9 622 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 NSUN5Q96P11 429 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 BCO2Q9BYV7 579 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 BCL11AQ9H165 835 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 KCNK12Q9HB15 430 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 PARD6AQ9NPB6 346 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 TLR7Q9NYK1 1049 aaKnown RBP3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 KIF21AQ7Z4S6 1674 aa3.45□□□□□ -1.86
DEPDC4-206ENST00000549100 KDM6BO15054 1643 aa3.44□□□□□ -1.86
DEPDC4-206ENST00000549100 DNMBPQ6XZF7 1577 aa3.44□□□□□ -1.86
DEPDC4-206ENST00000549100 DENND4BO75064 1496 aaPredicted RBP3.44□□□□□ -1.86
DEPDC4-206ENST00000549100 LRRC9Q6ZRR7 1453 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms