RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 LAMA4Q16363 1823 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 FOCADQ5VW36 1801 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 CLRN2A0PK11 232 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 WDHD1O75717 1129 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 CYP2D6P10635 497 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 STOX1Q6ZVD7 989 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 INCENPQ9NQS7 918 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 CNOT7Q9UIV1 285 aaKnown RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 SCAF8Q9UPN6 1271 aaKnown RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 USP17L12C9JPN9 530 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 USP17L21D6R901 530 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 K7ELQ4 463 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 EPB41L2O43491 1005 aaKnown RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 DLGAP5Q15398 846 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 TBC1D10BQ4KMP7 808 aaPredicted RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 GPC2Q8N158 579 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 UPF3BQ9BZI7 483 aaKnown RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 NACAP1Q9BZK3 213 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 MYOZ2Q9NPC6 264 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 MKRN1Q9UHC7 482 aaKnown RBP13.12□□□□□ -0.31
SCN8A-205ENST00000548086 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
SCN8A-205ENST00000548086 FLT1P17948 1338 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
SCN8A-205ENST00000548086 TCP10Q12799 353 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 ALX1Q15699 326 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 NBPF9Q3BBW0 867 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 CTR9Q6PD62 1173 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 KCNB2Q92953 911 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 TNPO1Q92973 898 aaKnown RBP13.11□□□□□ -0.31
SCN8A-205ENST00000548086 MRIQ9BWK5 157 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 MCM9Q9NXL9 1143 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 DDX60LQ5H9U9 1706 aaKnown RBP13.11□□□□□ -0.31
SCN8A-205ENST00000548086 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
SCN8A-205ENST00000548086 ZNF213O14771 459 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 PLCG2P16885 1265 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 RPS12P25398 132 aaKnown RBP13.11□□□□□ -0.31
SCN8A-205ENST00000548086 EPS15P42566 896 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 IMMTQ16891 758 aaKnown RBP13.11□□□□□ -0.31
SCN8A-205ENST00000548086 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 ZFPM1Q8IX07 1006 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 JAKMIP1Q96N16 626 aaKnown RBP13.11□□□□□ -0.31
SCN8A-205ENST00000548086 ATP8A2Q9NTI2 1148 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
SCN8A-205ENST00000548086 MYH1P12882 1939 aa13.1□□□□□ -0.31
SCN8A-205ENST00000548086 LAMB1P07942 1786 aa13.1□□□□□ -0.31
SCN8A-205ENST00000548086 WNT10BO00744 389 aa13.1□□□□□ -0.31
SCN8A-205ENST00000548086 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
SCN8A-205ENST00000548086 ZKSCAN1P17029 563 aaPredicted RBP13.1□□□□□ -0.31
SCN8A-205ENST00000548086 ZNF280AP59817 542 aaPredicted RBP13.1□□□□□ -0.31
SCN8A-205ENST00000548086 DPF2Q92785 391 aa13.1□□□□□ -0.31
SCN8A-205ENST00000548086 TCEANC2Q96MN5 208 aa13.1□□□□□ -0.31
SCN8A-205ENST00000548086 GPRC5DQ9NZD1 345 aa13.1□□□□□ -0.31
SCN8A-205ENST00000548086 GOLGA6L3A6NEY3 463 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 E7EWF7 191 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 CASTP20810 708 aaKnown RBP13.09□□□□□ -0.31
SCN8A-205ENST00000548086 PPARAQ07869 468 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 TRPM4Q8TD43 1214 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 FAM198AQ9UFP1 575 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 RPAP1Q9BWH6 1393 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-205ENST00000548086 TCP10L2B9ZVM9 353 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 PLCD1P51178 756 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 ANAPC15P60006 121 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 ZBED3Q96IU2 234 aaPredicted RBP13.09□□□□□ -0.31
SCN8A-205ENST00000548086 VEZTQ9HBM0 779 aa13.09□□□□□ -0.31
SCN8A-205ENST00000548086 NEDD4P46934 1319 aa13.08□□□□□ -0.32
SCN8A-205ENST00000548086 RABEP1Q15276 862 aa13.08□□□□□ -0.32
SCN8A-205ENST00000548086 KIF4BQ2VIQ3 1234 aa13.08□□□□□ -0.32
SCN8A-205ENST00000548086 GIMAP6Q6P9H5 292 aa13.08□□□□□ -0.32
SCN8A-205ENST00000548086 CERS3Q8IU89 383 aa13.08□□□□□ -0.32
SCN8A-205ENST00000548086 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.32
SCN8A-205ENST00000548086 ZNF70Q9UC06 446 aaPredicted RBP13.08□□□□□ -0.32
SCN8A-205ENST00000548086 PRDM1O75626 825 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 PTMSP20962 102 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 NEK4P51957 841 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 CHST3Q7LGC8 479 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 MTMR14Q8NCE2 650 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 SLC44A5Q8NCS7 719 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 OSBPL5Q9H0X9 879 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-205ENST00000548086 ARPP21Q9UBL0 812 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-205ENST00000548086 H7C1D1 291 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 POLR3DP05423 398 aaPredicted RBP13.07□□□□□ -0.32
SCN8A-205ENST00000548086 TSGA10IPQ3SY00 556 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
SCN8A-205ENST00000548086 C12orf60Q5U649 245 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 NOL8Q76FK4 1167 aaKnown RBP13.07□□□□□ -0.32
SCN8A-205ENST00000548086 SH3BP5LQ7L8J4 393 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 IL17RAQ96F46 866 aa13.07□□□□□ -0.32
SCN8A-205ENST00000548086 GBP4Q96PP9 640 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms