RNA–Protein interactions for RNA: ENST00000547034.5

TMTC3-202, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 1 (best)

Gene TMTC3, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-202ENST00000547034 RCOR1Q9UKL0 485 aa20.06■□□□□ 0.8
TMTC3-202ENST00000547034 STK36Q9NRP7 1315 aa20.06■□□□□ 0.8
TMTC3-202ENST00000547034 CDC27P30260 824 aa20.06■□□□□ 0.8
TMTC3-202ENST00000547034 CHAF1AQ13111 956 aaPredicted RBP20.06■□□□□ 0.8
TMTC3-202ENST00000547034 SART3Q15020 963 aaKnown RBP20.06■□□□□ 0.8
TMTC3-202ENST00000547034 PPP1R9BQ96SB3 815 aa20.06■□□□□ 0.8
TMTC3-202ENST00000547034 TNS1Q9HBL0 1735 aaKnown RBP20.06■□□□□ 0.8
TMTC3-202ENST00000547034 ZNF827Q17R98 1081 aa20.05■□□□□ 0.8
TMTC3-202ENST00000547034 CPLX2Q6PUV4 134 aaKnown RBP20.05■□□□□ 0.8
TMTC3-202ENST00000547034 TMC4Q7Z404 712 aa20.05■□□□□ 0.8
TMTC3-202ENST00000547034 RAB11FIP4Q86YS3 637 aa20.05■□□□□ 0.8
TMTC3-202ENST00000547034 PGBD1Q96JS3 809 aa20.05■□□□□ 0.8
TMTC3-202ENST00000547034 ZNF396Q96N95 335 aaPredicted RBP20.05■□□□□ 0.8
TMTC3-202ENST00000547034 ATP8A2Q9NTI2 1148 aa20.05■□□□□ 0.8
TMTC3-202ENST00000547034 SLC12A7Q9Y666 1083 aa20.05■□□□□ 0.8
TMTC3-202ENST00000547034 CCDC173Q0VFZ6 552 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 CTR9Q6PD62 1173 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 NFXL1Q6ZNB6 911 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 MICU3Q86XE3 530 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 ESR2Q92731 530 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 CRNKL1Q9BZJ0 848 aaKnown RBP20.04■□□□□ 0.8
TMTC3-202ENST00000547034 CCDC69A6NI79 296 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 GOLGA8AA7E2F4 631 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 SEC23AQ15436 765 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 SBK1Q52WX2 424 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 FUCA2Q9BTY2 467 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 DCP1AQ9NPI6 582 aaPredicted RBP20.04■□□□□ 0.8
TMTC3-202ENST00000547034 MYH2Q9UKX2 1941 aa20.04■□□□□ 0.8
TMTC3-202ENST00000547034 MINDY4BA8MYZ0 360 aa20.03■□□□□ 0.8
TMTC3-202ENST00000547034 PPFIA3O75145 1194 aa20.03■□□□□ 0.8
TMTC3-202ENST00000547034 IL1R1P14778 569 aa20.03■□□□□ 0.8
TMTC3-202ENST00000547034 FOSBP53539 338 aa20.03■□□□□ 0.8
TMTC3-202ENST00000547034 WTAPQ15007 396 aa20.03■□□□□ 0.8
TMTC3-202ENST00000547034 BRAPQ7Z569 592 aa20.03■□□□□ 0.8
TMTC3-202ENST00000547034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.03■□□□□ 0.8
TMTC3-202ENST00000547034 LIG1P18858 919 aa20.02■□□□□ 0.8
TMTC3-202ENST00000547034 GUCY1B3Q02153 619 aa20.02■□□□□ 0.8
TMTC3-202ENST00000547034 RRP12Q5JTH9 1297 aaKnown RBP20.02■□□□□ 0.8
TMTC3-202ENST00000547034 DZIP1Q86YF9 867 aaKnown RBP20.02■□□□□ 0.8
TMTC3-202ENST00000547034 NLGN1Q8N2Q7 840 aa20.02■□□□□ 0.8
TMTC3-202ENST00000547034 USP28Q96RU2 1077 aa20.02■□□□□ 0.8
TMTC3-202ENST00000547034 AATFQ9NY61 560 aaKnown RBP eCLIP20.02■□□□□ 0.8
TMTC3-202ENST00000547034 GGA1Q9UJY5 639 aa20.02■□□□□ 0.8
TMTC3-202ENST00000547034 ERICH2A1L162 156 aa20.02■□□□□ 0.79
TMTC3-202ENST00000547034 ORC4O43929 436 aa20.02■□□□□ 0.79
TMTC3-202ENST00000547034 RANBP6O60518 1105 aaKnown RBP20.02■□□□□ 0.79
TMTC3-202ENST00000547034 LDHBP07195 334 aaKnown RBP20.02■□□□□ 0.79
TMTC3-202ENST00000547034 IFNAR1P17181 557 aa20.02■□□□□ 0.79
TMTC3-202ENST00000547034 SYNE3Q6ZMZ3 975 aa20.02■□□□□ 0.79
TMTC3-202ENST00000547034 FLAD1Q8NFF5 587 aa20.02■□□□□ 0.79
TMTC3-202ENST00000547034 ARPP21Q9UBL0 812 aaPredicted RBP20.02■□□□□ 0.79
TMTC3-202ENST00000547034 UFL1O94874 794 aa20.01■□□□□ 0.79
TMTC3-202ENST00000547034 RXRAP19793 462 aa20.01■□□□□ 0.79
TMTC3-202ENST00000547034 NT5C2P49902 561 aa20.01■□□□□ 0.79
TMTC3-202ENST00000547034 COL23A1Q86Y22 540 aaPredicted RBP20.01■□□□□ 0.79
TMTC3-202ENST00000547034 CD209Q9NNX6 404 aa20.01■□□□□ 0.79
TMTC3-202ENST00000547034 TOMM22Q9NS69 142 aa20.01■□□□□ 0.79
TMTC3-202ENST00000547034 DDX19AQ9NUU7 478 aaKnown RBP20.01■□□□□ 0.79
TMTC3-202ENST00000547034 RTEL1Q9NZ71 1219 aa20.01■□□□□ 0.79
TMTC3-202ENST00000547034 MKRN1Q9UHC7 482 aaKnown RBP20.01■□□□□ 0.79
TMTC3-202ENST00000547034 EP400Q96L91 3159 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 USP17L12C9JPN9 530 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 USP17L21D6R901 530 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 SMIM22K7EJ46 135 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 FMNL1O95466 1100 aaPredicted RBP20■□□□□ 0.79
TMTC3-202ENST00000547034 PPP4CP60510 307 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 GSTO1P78417 241 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 KIF23Q02241 960 aaPredicted RBP20■□□□□ 0.79
TMTC3-202ENST00000547034 PPP2R5BQ15173 497 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 RBM43Q6ZSC3 357 aaKnown RBP20■□□□□ 0.79
TMTC3-202ENST00000547034 UBAC1Q9BSL1 405 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 ALG1Q9BT22 464 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 MYL10Q9BUA6 226 aa20■□□□□ 0.79
TMTC3-202ENST00000547034 IARSP41252 1262 aaKnown RBP19.99■□□□□ 0.79
TMTC3-202ENST00000547034 OTUD7BQ6GQQ9 843 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 SP8Q8IXZ3 490 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 ANP32BQ92688 251 aaKnown RBP19.99■□□□□ 0.79
TMTC3-202ENST00000547034 PDLIM2Q96JY6 352 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 COL11A2P13942 1736 aaPredicted RBP19.99■□□□□ 0.79
TMTC3-202ENST00000547034 CYP2D7A0A087X1C5 515 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 APBA3O96018 575 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 RTN1Q16799 776 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 ZNF654Q8IZM8 581 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 TBC1D16Q8TBP0 767 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 ZSCAN10Q96SZ4 725 aaPredicted RBP19.99■□□□□ 0.79
TMTC3-202ENST00000547034 ZKSCAN3Q9BRR0 538 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 NUP62CLQ9H1M0 184 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 POLR3EQ9NVU0 708 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 TNKSO95271 1327 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 NAV1Q8NEY1 1877 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 CDK5RAP2Q96SN8 1893 aa19.99■□□□□ 0.79
TMTC3-202ENST00000547034 CCDC196A0A1B0GTZ2 297 aa19.98■□□□□ 0.79
TMTC3-202ENST00000547034 MYSM1Q5VVJ2 828 aa19.98■□□□□ 0.79
TMTC3-202ENST00000547034 CERS3Q8IU89 383 aa19.98■□□□□ 0.79
TMTC3-202ENST00000547034 PHKBQ93100 1093 aa19.98■□□□□ 0.79
TMTC3-202ENST00000547034 GPR101Q96P66 508 aaPredicted RBP19.98■□□□□ 0.79
TMTC3-202ENST00000547034 FTOQ9C0B1 505 aaKnown RBP eCLIP19.98■□□□□ 0.79
TMTC3-202ENST00000547034 POLLQ9UGP5 575 aa19.98■□□□□ 0.79
TMTC3-202ENST00000547034 JAG2Q9Y219 1238 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms