RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 FOXN1O15353 648 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 ACTN2P35609 894 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 LEKR1Q6ZMV7 388 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 CEP112Q8N8E3 955 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.24■□□□□ 0.19
SRP54-202ENST00000546080 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 H7C1W4 665 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 EIF3JO75822 258 aaKnown RBP16.24■□□□□ 0.19
SRP54-202ENST00000546080 ZNF18P17022 549 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 FMR1Q06787 632 aaKnown RBP eCLIP16.24■□□□□ 0.192e-7■□□□□ 8.6
SRP54-202ENST00000546080 TRDNQ13061 729 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 MCM6Q14566 821 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 HSP90AB3PQ58FF7 597 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 HDXQ7Z353 690 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 NUTM2AQ8IVF1 878 aaPredicted RBP16.24■□□□□ 0.19
SRP54-202ENST00000546080 IQUBQ8NA54 791 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 ENOX1Q8TC92 643 aaKnown RBP16.24■□□□□ 0.19
SRP54-202ENST00000546080 HNRNPLLQ8WVV9 542 aaKnown RBP16.24■□□□□ 0.19
SRP54-202ENST00000546080 VPS18Q9P253 973 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 PUF60Q9UHX1 559 aaKnown RBP16.24■□□□□ 0.19
SRP54-202ENST00000546080 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
SRP54-202ENST00000546080 AKR1B15C9JRZ8 316 aaPredicted RBP16.23■□□□□ 0.19
SRP54-202ENST00000546080 ERLIN1O75477 346 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 MTF1Q14872 753 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 POSTNQ15063 836 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 SRLQ86TD4 932 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 ELOA2Q8IYF1 753 aaPredicted RBP16.23■□□□□ 0.19
SRP54-202ENST00000546080 TRMT44Q8IYL2 757 aaKnown RBP16.23■□□□□ 0.19
SRP54-202ENST00000546080 KRI1Q8N9T8 703 aaKnown RBP16.23■□□□□ 0.19
SRP54-202ENST00000546080 MLKLQ8NB16 471 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 RAPGEF4Q8WZA2 1011 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 APPBP2Q92624 585 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 ZNF594Q96JF6 807 aaPredicted RBP16.23■□□□□ 0.19
SRP54-202ENST00000546080 IRX2Q9BZI1 471 aaPredicted RBP16.23■□□□□ 0.19
SRP54-202ENST00000546080 PDE11AQ9HCR9 933 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 LZTFL1Q9NQ48 299 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 LCMT1Q9UIC8 334 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 ANGEL1Q9UNK9 670 aaKnown RBP16.23■□□□□ 0.19
SRP54-202ENST00000546080 AXIN2Q9Y2T1 843 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 KIF5CO60282 957 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 MDM2Q00987 491 aaPredicted RBP16.23■□□□□ 0.19
SRP54-202ENST00000546080 PHKBQ93100 1093 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 ANKZF1Q9H8Y5 726 aa16.23■□□□□ 0.19
SRP54-202ENST00000546080 SOWAHDA6NJG2 315 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 TRIM66O15016 1216 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 IVLP07476 585 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 RXRAP19793 462 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 BEND6Q5SZJ8 279 aaPredicted RBP16.22■□□□□ 0.19
SRP54-202ENST00000546080 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 PANX2Q96RD6 677 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 CWC25Q9NXE8 425 aaPredicted RBP16.22■□□□□ 0.19
SRP54-202ENST00000546080 RSPH14Q9UHP6 348 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 CDC23Q9UJX2 597 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 RRP15Q9Y3B9 282 aaKnown RBP16.22■□□□□ 0.19
SRP54-202ENST00000546080 KIF1AQ12756 1690 aa16.22■□□□□ 0.19
SRP54-202ENST00000546080 PHKG2P15735 406 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 USP5P45974 858 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 SPECC1Q5M775 1068 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.21■□□□□ 0.19
SRP54-202ENST00000546080 PUS7LQ9H0K6 701 aaKnown RBP16.21■□□□□ 0.19
SRP54-202ENST00000546080 MAP3K15Q6ZN16 1313 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 TMEM94Q12767 1356 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 GPAA1O43292 621 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 CIAO1O76071 339 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 PRR29P0C7W0 189 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 IARSP41252 1262 aaKnown RBP16.21■□□□□ 0.19
SRP54-202ENST00000546080 NR1I3Q14994 352 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 ZNF827Q17R98 1081 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 MSANTD4Q8NCY6 345 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 NAA15Q9BXJ9 866 aaKnown RBP16.21■□□□□ 0.19
SRP54-202ENST00000546080 CEP126Q9P2H0 1117 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 RAB21Q9UL25 225 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 ADGRG1Q9Y653 693 aa16.21■□□□□ 0.19
SRP54-202ENST00000546080 SH2B2O14492 632 aaPredicted RBP16.2■□□□□ 0.18
SRP54-202ENST00000546080 TUBB2AQ13885 445 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 APOA5Q6Q788 366 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 PPFIBP1Q86W92 1011 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 MICU3Q86XE3 530 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
SRP54-202ENST00000546080 TUBB2BQ9BVA1 445 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
SRP54-202ENST00000546080 SAMSN1Q9NSI8 373 aaKnown RBP16.2■□□□□ 0.18
SRP54-202ENST00000546080 TUBB4BP68371 445 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 MORC3Q14149 939 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 KIF4BQ2VIQ3 1234 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 NT5DC1Q5TFE4 455 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 MSL3Q8N5Y2 521 aaKnown RBP16.2■□□□□ 0.18
SRP54-202ENST00000546080 TRIML1Q8N9V2 468 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 PNKPQ96T60 521 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 PUS3Q9BZE2 481 aaKnown RBP16.2■□□□□ 0.18
SRP54-202ENST00000546080 EFCC1Q9HA90 598 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 SERTAD1Q9UHV2 236 aa16.2■□□□□ 0.18
SRP54-202ENST00000546080 A0A1B0GTH6 734 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 POLR2DO15514 142 aaKnown RBP16.19■□□□□ 0.18
SRP54-202ENST00000546080 TATP17735 454 aaPredicted RBP16.19■□□□□ 0.18
SRP54-202ENST00000546080 ZNF569Q5MCW4 686 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 RAD9BQ6WBX8 426 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 CYB5R4Q7L1T6 521 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 PLCD3Q8N3E9 789 aa16.19■□□□□ 0.18
SRP54-202ENST00000546080 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms