RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 NKIRAS1Q9NYS0 192 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 A6NNZ2 444 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 DKC1O60832 514 aaKnown RBP eCLIP13.1□□□□□ -0.31
CIT-217ENST00000545913 NOL3O60936 208 aaKnown RBP13.1□□□□□ -0.31
CIT-217ENST00000545913 RHOXF2BP0C7M4 288 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 RHOXF2Q9BQY4 288 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 ZRANB1Q9UGI0 708 aa13.1□□□□□ -0.31
CIT-217ENST00000545913 MAST3O60307 1309 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 A0A1B0GVL5 298 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 TEX11Q8IYF3 940 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 EDC4Q6P2E9 1401 aaKnown RBP13.09□□□□□ -0.31
CIT-217ENST00000545913 MBD4O95243 580 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 E7EVH7 732 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 RNMTO43148 476 aaKnown RBP13.09□□□□□ -0.31
CIT-217ENST00000545913 RXRAP19793 462 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
CIT-217ENST00000545913 C19orf44Q9H6X5 657 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 DDX21Q9NR30 783 aaKnown RBP eCLIP13.09□□□□□ -0.31
CIT-217ENST00000545913 SMIM23A6NLE4 172 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 ERCC5P28715 1186 aaPredicted RBP13.09□□□□□ -0.31
CIT-217ENST00000545913 PARP10Q53GL7 1025 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 B4GALNT4Q76KP1 1039 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 KIFC2Q96AC6 838 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 TBC1D31Q96DN5 1066 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 EXOC7Q9UPT5 735 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 ERCC6LQ2NKX8 1250 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 AKNAD1Q5T1N1 836 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 STK10O94804 968 aaKnown RBP13.09□□□□□ -0.31
CIT-217ENST00000545913 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 HAUS2Q9NVX0 235 aa13.09□□□□□ -0.31
CIT-217ENST00000545913 GTF2A1P52655 376 aaPredicted RBP13.08□□□□□ -0.31
CIT-217ENST00000545913 BIRC3Q13489 604 aa13.08□□□□□ -0.31
CIT-217ENST00000545913 COL17A1Q9UMD9 1497 aaPredicted RBP13.08□□□□□ -0.32
CIT-217ENST00000545913 SPOPO43791 374 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 PPP2R5BQ15173 497 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 IGSF22Q8N9C0 903 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 CNBD1Q8NA66 436 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 LEO1Q8WVC0 666 aaPredicted RBP13.08□□□□□ -0.32
CIT-217ENST00000545913 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
CIT-217ENST00000545913 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.08□□□□□ -0.32
CIT-217ENST00000545913 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
CIT-217ENST00000545913 NUP153P49790 1475 aaKnown RBP13.08□□□□□ -0.32
CIT-217ENST00000545913 PPP2R3AQ06190 1150 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 LIN9Q5TKA1 542 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 SYT10Q6XYQ8 523 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 FAM184BQ9ULE4 1060 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 A0A1B0GUL7 405 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 POLR2DO15514 142 aaKnown RBP13.08□□□□□ -0.32
CIT-217ENST00000545913 TBC1D8BQ0IIM8 1120 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 HELBQ8NG08 1087 aaPredicted RBP13.08□□□□□ -0.32
CIT-217ENST00000545913 PLBD2Q8NHP8 589 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 IP6K1Q92551 441 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 LRRC59Q96AG4 307 aaKnown RBP13.08□□□□□ -0.32
CIT-217ENST00000545913 IMPACTQ9P2X3 320 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 MICALL1Q8N3F8 863 aa13.08□□□□□ -0.32
CIT-217ENST00000545913 TERF1P54274 439 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 WDR66Q8TBY9 1149 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 STRN3Q13033 797 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 NAPGQ99747 312 aaPredicted RBP13.07□□□□□ -0.32
CIT-217ENST00000545913 TPD52P55327 224 aaPredicted RBP13.07□□□□□ -0.32
CIT-217ENST00000545913 LACTBP83111 547 aaPredicted RBP13.07□□□□□ -0.32
CIT-217ENST00000545913 ZNF174Q15697 407 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 INTS8Q75QN2 995 aaKnown RBP13.07□□□□□ -0.32
CIT-217ENST00000545913 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
CIT-217ENST00000545913 KCNH3Q9ULD8 1083 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
CIT-217ENST00000545913 ANO1Q5XXA6 986 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 PDE4DQ08499 809 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 BRDTQ58F21 947 aaPredicted RBP13.07□□□□□ -0.32
CIT-217ENST00000545913 STMN2Q93045 179 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 PLIN2Q99541 437 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 HOXB7P09629 217 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
CIT-217ENST00000545913 TMOD4Q9NZQ9 345 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 APPBP2Q92624 585 aa13.07□□□□□ -0.32
CIT-217ENST00000545913 GCP02774 474 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 ITGA6P23229 1130 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 CCT6BQ92526 530 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 HOOK2Q96ED9 719 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 TLDC2A0PJX2 215 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 CUTAO60888 179 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 GEN1Q17RS7 908 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 FYB2Q5VWT5 728 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 IFT20Q8IY31 132 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 CCDC94Q9BW85 323 aaPredicted RBP13.06□□□□□ -0.32
CIT-217ENST00000545913 TRPC3Q13507 836 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 ASIC2Q16515 512 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 TTC31Q49AM3 519 aaPredicted RBP13.06□□□□□ -0.32
CIT-217ENST00000545913 SLC27A2O14975 620 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 GNPATO15228 680 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 ZNF790Q6PG37 636 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 CEP57Q86XR8 500 aa13.06□□□□□ -0.32
CIT-217ENST00000545913 NOX5Q96PH1 765 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms