RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 CDC25BP30305 580 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 WTAPQ15007 396 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 JMYQ8N9B5 988 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 MYH7P12883 1935 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 MYH15Q9Y2K3 1946 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 BTBD18B2RXH4 712 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 GYG1P46976 350 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 SART3Q15020 963 aaKnown RBP18.06■□□□□ 0.48
SCAP-215ENST00000545718 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 TMC6Q7Z403 805 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 ZNF710Q8N1W2 664 aa18.06■□□□□ 0.48
SCAP-215ENST00000545718 XPO4Q9C0E2 1151 aaKnown RBP18.06■□□□□ 0.48
SCAP-215ENST00000545718 FAM217BQ9NTX9 383 aaPredicted RBP18.06■□□□□ 0.48
SCAP-215ENST00000545718 GTF2E1P29083 439 aaPredicted RBP18.05■□□□□ 0.48
SCAP-215ENST00000545718 PNOCQ13519 176 aa18.05■□□□□ 0.48
SCAP-215ENST00000545718 ITPK1Q13572 414 aa18.05■□□□□ 0.48
SCAP-215ENST00000545718 NTRK3Q16288 839 aa18.05■□□□□ 0.48
SCAP-215ENST00000545718 SMIM22K7EJ46 135 aa18.05■□□□□ 0.48
SCAP-215ENST00000545718 TPM4P67936 248 aa18.05■□□□□ 0.48
SCAP-215ENST00000545718 SAFBQ15424 915 aaKnown RBP eCLIP18.05■□□□□ 0.48
SCAP-215ENST00000545718 HSP90AA4PQ58FG1 418 aa18.05■□□□□ 0.48
SCAP-215ENST00000545718 SHC4Q6S5L8 630 aa18.05■□□□□ 0.48
SCAP-215ENST00000545718 KRT23Q9C075 422 aa18.05■□□□□ 0.48
SCAP-215ENST00000545718 RTN1Q16799 776 aa18.04■□□□□ 0.48
SCAP-215ENST00000545718 TRIM22Q8IYM9 498 aa18.04■□□□□ 0.48
SCAP-215ENST00000545718 CNNM2Q9H8M5 875 aa18.04■□□□□ 0.48
SCAP-215ENST00000545718 NLRP12P59046 1061 aa18.04■□□□□ 0.48
SCAP-215ENST00000545718 UBAC1Q9BSL1 405 aa18.04■□□□□ 0.48
SCAP-215ENST00000545718 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.04■□□□□ 0.48
SCAP-215ENST00000545718 ATRNO75882 1429 aa18.04■□□□□ 0.48
SCAP-215ENST00000545718 LRP6O75581 1613 aa18.04■□□□□ 0.48
SCAP-215ENST00000545718 NUP98P52948 1817 aa18.04■□□□□ 0.48
SCAP-215ENST00000545718 CAMTA2O94983 1202 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 PTPN21Q16825 1174 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 MTERF4Q7Z6M4 381 aaKnown RBP18.03■□□□□ 0.48
SCAP-215ENST00000545718 DIS3L2Q8IYB7 885 aaKnown RBP18.03■□□□□ 0.48
SCAP-215ENST00000545718 hCG_1642624A0A1W2PR95 340 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 SGMS1Q86VZ5 419 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 DISP2A7MBM2 1401 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 PRDM1O75626 825 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 GTF2F1P35269 517 aaKnown RBP eCLIP18.03■□□□□ 0.488e-7■■■□□ 18.7
SCAP-215ENST00000545718 LIFRP42702 1097 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 ALX1Q15699 326 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 CNNM3Q8NE01 707 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 MYH3P11055 1940 aa18.03■□□□□ 0.48
SCAP-215ENST00000545718 KCNQ2O43526 872 aa18.02■□□□□ 0.48
SCAP-215ENST00000545718 ATP1A3P13637 1013 aa18.02■□□□□ 0.48
SCAP-215ENST00000545718 NR5A1Q13285 461 aa18.02■□□□□ 0.48
SCAP-215ENST00000545718 ADGRA1Q86SQ6 560 aa18.02■□□□□ 0.48
SCAP-215ENST00000545718 PDILTQ8N807 584 aa18.02■□□□□ 0.48
SCAP-215ENST00000545718 CYP2D7A0A087X1C5 515 aa18.02■□□□□ 0.47
SCAP-215ENST00000545718 PARP10Q53GL7 1025 aa18.02■□□□□ 0.47
SCAP-215ENST00000545718 CEP135Q66GS9 1140 aa18.02■□□□□ 0.47
SCAP-215ENST00000545718 CCDC112Q8NEF3 446 aa18.02■□□□□ 0.47
SCAP-215ENST00000545718 PTPAQ15257 358 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 MARCH10Q8NA82 808 aaPredicted RBP18.01■□□□□ 0.47
SCAP-215ENST00000545718 NTSR2O95665 410 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 PTPN14Q15678 1187 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 LONRF3Q496Y0 759 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 NBPF11Q86T75 865 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 NOSTRINQ8IVI9 506 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 KCNH3Q9ULD8 1083 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 SLIT2O94813 1529 aa18.01■□□□□ 0.47
SCAP-215ENST00000545718 FMNL1O95466 1100 aaPredicted RBP18■□□□□ 0.47
SCAP-215ENST00000545718 SERPINC1P01008 464 aa18■□□□□ 0.47
SCAP-215ENST00000545718 PPARAQ07869 468 aa18■□□□□ 0.47
SCAP-215ENST00000545718 NAA30Q147X3 362 aaPredicted RBP18■□□□□ 0.47
SCAP-215ENST00000545718 TNKS1BP1Q9C0C2 1729 aaKnown RBP18■□□□□ 0.47
SCAP-215ENST00000545718 SMTNL1A8MU46 457 aa18■□□□□ 0.47
SCAP-215ENST00000545718 FOXN1O15353 648 aa18■□□□□ 0.47
SCAP-215ENST00000545718 NEMFO60524 1076 aa18■□□□□ 0.47
SCAP-215ENST00000545718 GNAT2P19087 354 aa18■□□□□ 0.47
SCAP-215ENST00000545718 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
SCAP-215ENST00000545718 AK7Q96M32 723 aa18■□□□□ 0.47
SCAP-215ENST00000545718 CDC5LQ99459 802 aaKnown RBP18■□□□□ 0.47
SCAP-215ENST00000545718 MAP3K14Q99558 947 aa18■□□□□ 0.47
SCAP-215ENST00000545718 PPP6R2O75170 966 aa18■□□□□ 0.47
SCAP-215ENST00000545718 IFNAR1P17181 557 aa18■□□□□ 0.47
SCAP-215ENST00000545718 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.475e-6■□□□□ 11
SCAP-215ENST00000545718 CCZ1BP86790 482 aa18■□□□□ 0.47
SCAP-215ENST00000545718 CCZ1P86791 482 aaPredicted RBP18■□□□□ 0.47
SCAP-215ENST00000545718 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
SCAP-215ENST00000545718 GRIN1Q05586 938 aa18■□□□□ 0.47
SCAP-215ENST00000545718 SLC4A8Q2Y0W8 1093 aa18■□□□□ 0.47
SCAP-215ENST00000545718 ANKRD18AQ8IVF6 992 aa18■□□□□ 0.47
SCAP-215ENST00000545718 ZNF654Q8IZM8 581 aa18■□□□□ 0.47
SCAP-215ENST00000545718 WASF1Q92558 559 aa18■□□□□ 0.47
SCAP-215ENST00000545718 MAGEB6P1A0A0J9YX57 407 aa17.99■□□□□ 0.47
SCAP-215ENST00000545718 DYNLL1P63167 89 aaKnown RBP17.99■□□□□ 0.47
SCAP-215ENST00000545718 ERFEQ4G0M1 354 aa17.99■□□□□ 0.47
SCAP-215ENST00000545718 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
SCAP-215ENST00000545718 SFPQP23246 707 aaKnown RBP eCLIP17.99■□□□□ 0.47
SCAP-215ENST00000545718 CFAP100Q494V2 611 aa17.99■□□□□ 0.47
SCAP-215ENST00000545718 PPP4R3BQ5MIZ7 849 aa17.99■□□□□ 0.47
SCAP-215ENST00000545718 PDCL2Q8N4E4 241 aa17.99■□□□□ 0.47
SCAP-215ENST00000545718 KRI1Q8N9T8 703 aaKnown RBP17.99■□□□□ 0.47
SCAP-215ENST00000545718 STAG1Q8WVM7 1258 aa17.99■□□□□ 0.47
SCAP-215ENST00000545718 RNF41Q9H4P4 317 aaPredicted RBP17.99■□□□□ 0.47
SCAP-215ENST00000545718 JAG2Q9Y219 1238 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms