RNA–Protein interactions for RNA: ENST00000545605.1

SCNN1A-223, Transcript of sodium channel epithelial 1 alpha subunit, human

TSL 4

Gene SCNN1A, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCNN1A-223	ENST00000545605	USP5	P45974	858 aa		13.71	□□□□□ -0.21
SCNN1A-223	ENST00000545605	MMP14	P50281	582 aa		13.71	□□□□□ -0.21
SCNN1A-223	ENST00000545605	TRDN	Q13061	729 aa		13.71	□□□□□ -0.21
SCNN1A-223	ENST00000545605	AKNAD1	Q5T1N1	836 aa		13.71	□□□□□ -0.21
SCNN1A-223	ENST00000545605	CIAPIN1	Q6FI81	312 aa		13.71	□□□□□ -0.21
SCNN1A-223	ENST00000545605	DHX32	Q7L7V1	743 aa	Known RBP	13.71	□□□□□ -0.21
SCNN1A-223	ENST00000545605	AMOTL1	Q8IY63	956 aa		13.71	□□□□□ -0.21
SCNN1A-223	ENST00000545605	RAD17	O75943	681 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CPA1	P15085	419 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	RPS12	P25398	132 aa	Known RBP	13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MCM5	P33992	734 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SCNN1D	P51172	638 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CTR9	Q6PD62	1173 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MTA3	Q9BTC8	594 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	KRT23	Q9C075	422 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	HDAC9	Q9UKV0	1011 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MYH15	Q9Y2K3	1946 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ATRNL1	Q5VV63	1379 aa		13.7	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MYH6	P13533	1939 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MYH4	Q9Y623	1939 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	FZD9	O00144	591 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ORC4	O43929	436 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	NPM3	O75607	178 aa	Known RBP	13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	WDHD1	O75717	1129 aa	Predicted RBP	13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SLC3A2	P08195	630 aa	Known RBP	13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	FGR	P09769	529 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	LMNB1	P20700	586 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	PRELP	P51888	382 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CXCL9	Q07325	125 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CUL4A	Q13619	759 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	COL9A3	Q14050	684 aa	Predicted RBP	13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TOB2	Q14106	344 aa	Predicted RBP	13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TNIP1	Q15025	636 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TMX3	Q96JJ7	454 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MCM9	Q9NXL9	1143 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TAOK2	Q9UL54	1235 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	LIMCH1	Q9UPQ0	1083 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	NID2	Q14112	1375 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	PLIN4	Q96Q06	1357 aa		13.69	□□□□□ -0.22
SCNN1A-223	ENST00000545605	USP17L12	C9JPN9	530 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	USP17L21	D6R901	530 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ANTXR2	P58335	489 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	EXOSC10	Q01780	885 aa	Known RBP	13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CTDSPL2	Q05D32	466 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	C12orf60	Q5U649	245 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MFSD6	Q6ZSS7	791 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MAPKAPK5	Q8IW41	473 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MTMR14	Q8NCE2	650 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TGFBRAP1	Q8WUH2	860 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TMEM87B	Q96K49	555 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SCN4A	P35499	1836 aa		13.68	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SPDYE2B	A6NHP3	402 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	MINDY4B	A8MYZ0	360 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605		B4E1Z4	1266 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	PRC1	O43663	620 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	HSP90AA1	P07900	732 aa	Known RBP	13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SPDYE6	P0CI01	402 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SLC4A3	P48751	1232 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	EIF6	P56537	245 aa	Known RBP	13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CFAP100	Q494V2	611 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CDC42EP5	Q6NZY7	148 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	OGFOD1	Q8N543	542 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	INTS4	Q96HW7	963 aa	Known RBP	13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TCEANC2	Q96MN5	208 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	IDI2	Q9BXS1	227 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	PAPPA2	Q9BXP8	1791 aa		13.67	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ZNF541	Q9H0D2	1346 aa		13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	DOCK1	Q14185	1865 aa		13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CYP2D7	A0A087X1C5	515 aa		13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	USP17L8	P0C7I0	530 aa		13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	PDE4B	Q07343	736 aa		13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605		Q6ZUG5	572 aa		13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	NOL8	Q76FK4	1167 aa	Known RBP	13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ESR2	Q92731	530 aa		13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ANGEL1	Q9UNK9	670 aa	Known RBP	13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	TACC3	Q9Y6A5	838 aa		13.66	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	WDR90	Q96KV7	1748 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SH2B2	O14492	632 aa	Predicted RBP	13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	KDM4A	O75164	1064 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	LARGE1	O95461	756 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CYP2D6	P10635	497 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	YBX3	P16989	372 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	DDIT3	P35638	169 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	EVC	P57679	992 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ZNF280A	P59817	542 aa	Predicted RBP	13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	FGD1	P98174	961 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	SART3	Q15020	963 aa	Known RBP	13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	C16orf86	Q6ZW13	317 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	CYB5R4	Q7L1T6	521 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	DPF2	Q92785	391 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	BRF1	Q92994	677 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ZBED3	Q96IU2	234 aa	Predicted RBP	13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	EHD4	Q9H223	541 aa		13.65	□□□□□ -0.22
SCNN1A-223	ENST00000545605	ZNF287	Q9HBT7	754 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms