RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 ERICH2A1L162 156 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 CMA1P23946 247 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 WTAPQ15007 396 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 CAVIN4Q5BKX8 364 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 CCDC186Q7Z3E2 898 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 SLC26A6Q9BXS9 759 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 PYCARDQ9ULZ3 195 aa20.63■□□□□ 0.89
PTPN6-222ENST00000543744 COL4A1P02462 1669 aa20.62■□□□□ 0.89
PTPN6-222ENST00000543744 MAGEB6P1A0A0J9YX57 407 aa20.62■□□□□ 0.89
PTPN6-222ENST00000543744 PIP4K2BP78356 416 aa20.62■□□□□ 0.89
PTPN6-222ENST00000543744 AXDND1Q5T1B0 1012 aaPredicted RBP20.62■□□□□ 0.89
PTPN6-222ENST00000543744 SARM1Q6SZW1 724 aa20.62■□□□□ 0.89
PTPN6-222ENST00000543744 BICDL1Q6ZP65 573 aa20.62■□□□□ 0.89
PTPN6-222ENST00000543744 WASF1Q92558 559 aa20.62■□□□□ 0.89
PTPN6-222ENST00000543744 ERCC4Q92889 916 aaPredicted RBP20.62■□□□□ 0.89
PTPN6-222ENST00000543744 MTA3Q9BTC8 594 aa20.62■□□□□ 0.89
PTPN6-222ENST00000543744 FMNL1O95466 1100 aaPredicted RBP20.61■□□□□ 0.89
PTPN6-222ENST00000543744 IFNAR1P17181 557 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 PPARAQ07869 468 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 ZRSR1Q15695 479 aaKnown RBP20.61■□□□□ 0.89
PTPN6-222ENST00000543744 ADGRA1Q86SQ6 560 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 TMTC2Q8N394 836 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 ZKSCAN3Q9BRR0 538 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 KIAA1468Q9P260 1216 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 MINPP1Q9UNW1 487 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 NID2Q14112 1375 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 A0A087WWV3 80 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 UQCRHLA0A096LP55 91 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 RGL2O15211 777 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 UQCRHP07919 91 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 U2AF2P26368 475 aaKnown RBP eCLIP20.61■□□□□ 0.89
PTPN6-222ENST00000543744 CDC25BP30305 580 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 KCNQ4P56696 695 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 STK11IPQ8N1F8 1099 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 JMYQ8N9B5 988 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 CLIP2Q9UDT6 1046 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 CNTNAP4Q9C0A0 1308 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 CHD4Q14839 1912 aa20.61■□□□□ 0.89
PTPN6-222ENST00000543744 WTIPA6NIX2 430 aaPredicted RBP20.6■□□□□ 0.89
PTPN6-222ENST00000543744 ZNF202O95125 648 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 MARCKSP29966 332 aaPredicted RBP20.6■□□□□ 0.89
PTPN6-222ENST00000543744 SLC10A5Q5PT55 438 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 DHX40Q8IX18 779 aaKnown RBP20.6■□□□□ 0.89
PTPN6-222ENST00000543744 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 PPP6R2O75170 966 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 WDHD1O75717 1129 aaPredicted RBP20.6■□□□□ 0.89
PTPN6-222ENST00000543744 PFKFB1P16118 471 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 RTN1Q16799 776 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 TRIM22Q8IYM9 498 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 SDR42E1Q8WUS8 393 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.6■□□□□ 0.89
PTPN6-222ENST00000543744 NRBP1Q9UHY1 535 aa20.6■□□□□ 0.89
PTPN6-222ENST00000543744 MINDY4BA8MYZ0 360 aa20.59■□□□□ 0.89
PTPN6-222ENST00000543744 TBC1D9BQ66K14 1250 aa20.59■□□□□ 0.89
PTPN6-222ENST00000543744 UBAC1Q9BSL1 405 aa20.59■□□□□ 0.89
PTPN6-222ENST00000543744 CCDC196A0A1B0GTZ2 297 aa20.58■□□□□ 0.89
PTPN6-222ENST00000543744 SLC3A2P08195 630 aaKnown RBP20.58■□□□□ 0.89
PTPN6-222ENST00000543744 CELF1Q92879 486 aaKnown RBP20.58■□□□□ 0.89
PTPN6-222ENST00000543744 FBXW7Q969H0 707 aa20.58■□□□□ 0.89
PTPN6-222ENST00000543744 MRFAP1L1Q96HT8 127 aa20.58■□□□□ 0.89
PTPN6-222ENST00000543744 FAM84BQ96KN1 310 aaPredicted RBP20.58■□□□□ 0.89
PTPN6-222ENST00000543744 ANAPC4Q9UJX5 808 aa20.58■□□□□ 0.89
PTPN6-222ENST00000543744 UBE2Q2LH0YL09 131 aa20.58■□□□□ 0.88
PTPN6-222ENST00000543744 RCAN1P53805 252 aa20.58■□□□□ 0.88
PTPN6-222ENST00000543744 PTPAQ15257 358 aa20.58■□□□□ 0.88
PTPN6-222ENST00000543744 MAP3K14Q99558 947 aa20.58■□□□□ 0.88
PTPN6-222ENST00000543744 RIOK1Q9BRS2 568 aaKnown RBP20.58■□□□□ 0.88
PTPN6-222ENST00000543744 NYXQ9GZU5 481 aa20.58■□□□□ 0.88
PTPN6-222ENST00000543744 COL1A1P02452 1464 aaPredicted RBP20.57■□□□□ 0.88
PTPN6-222ENST00000543744 TOM1O60784 492 aa20.57■□□□□ 0.88
PTPN6-222ENST00000543744 SAFBQ15424 915 aaKnown RBP eCLIP20.57■□□□□ 0.88
PTPN6-222ENST00000543744 AOPEPQ8N6M6 819 aa20.57■□□□□ 0.88
PTPN6-222ENST00000543744 ESR2Q92731 530 aa20.57■□□□□ 0.88
PTPN6-222ENST00000543744 BCL2L12Q9HB09 334 aa20.57■□□□□ 0.88
PTPN6-222ENST00000543744 VPS72Q15906 364 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 NGLY1Q96IV0 654 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 PRIMPOLQ96LW4 560 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 SETDB2Q96T68 719 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 NARFQ9UHQ1 456 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 MROH7-TTC4A0A0A0MT08 1334 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 GUCY1A2P33402 732 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 SYKP43405 635 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 RBM6P78332 1123 aaKnown RBP20.56■□□□□ 0.88
PTPN6-222ENST00000543744 SMIM5Q71RC9 77 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 NOSTRINQ8IVI9 506 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 ZNF654Q8IZM8 581 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 FANCBQ8NB91 859 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 TIGD1Q96MW7 591 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 C8orf37Q96NL8 207 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 NLRP3Q96P20 1036 aa20.56■□□□□ 0.88
PTPN6-222ENST00000543744 SEMA3EO15041 775 aa20.55■□□□□ 0.88
PTPN6-222ENST00000543744 MMP1P03956 469 aa20.55■□□□□ 0.88
PTPN6-222ENST00000543744 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
PTPN6-222ENST00000543744 LRMPQ12912 555 aa20.55■□□□□ 0.88
PTPN6-222ENST00000543744 DPCR1Q3MIW9 517 aa20.55■□□□□ 0.88
PTPN6-222ENST00000543744 RC3H1Q5TC82 1133 aaKnown RBP20.55■□□□□ 0.88
PTPN6-222ENST00000543744 CRACR2BQ8N4Y2 399 aaPredicted RBP20.55■□□□□ 0.88
PTPN6-222ENST00000543744 NUP133Q8WUM0 1156 aa20.55■□□□□ 0.88
PTPN6-222ENST00000543744 BPIFA3Q9BQP9 254 aa20.55■□□□□ 0.88
PTPN6-222ENST00000543744 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms