RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 MARCKSP29966 332 aaPredicted RBP15.58■□□□□ 0.09
PPME1-208ENST00000543525 NTRK3Q16288 839 aa15.58■□□□□ 0.09
PPME1-208ENST00000543525 PHKBQ93100 1093 aa15.58■□□□□ 0.09
PPME1-208ENST00000543525 SLC12A7Q9Y666 1083 aa15.58■□□□□ 0.09
PPME1-208ENST00000543525 CUTAO60888 179 aa15.58■□□□□ 0.08
PPME1-208ENST00000543525 U2AF2P26368 475 aaKnown RBP eCLIP15.58■□□□□ 0.089e-15■■■■■ 42.2
PPME1-208ENST00000543525 CCZ1BP86790 482 aa15.58■□□□□ 0.08
PPME1-208ENST00000543525 CCZ1P86791 482 aaPredicted RBP15.58■□□□□ 0.08
PPME1-208ENST00000543525 ARID5BQ14865 1188 aa15.58■□□□□ 0.08
PPME1-208ENST00000543525 CEP135Q66GS9 1140 aa15.58■□□□□ 0.08
PPME1-208ENST00000543525 NKX2-3Q8TAU0 364 aa15.58■□□□□ 0.08
PPME1-208ENST00000543525 UTP14AQ9BVJ6 771 aaKnown RBP15.58■□□□□ 0.08
PPME1-208ENST00000543525 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.08
PPME1-208ENST00000543525 SENP2Q9HC62 589 aa15.58■□□□□ 0.08
PPME1-208ENST00000543525 KCND1Q9NSA2 647 aa15.58■□□□□ 0.08
PPME1-208ENST00000543525 FAM237AA0A1B0GTK4 181 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 FAM177BA6PVY3 158 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 IKBKBO14920 756 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 SMC2O95347 1197 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 RASGRF1Q13972 1273 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 PTPAQ15257 358 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 AKNAD1Q5T1N1 836 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 MFSD6Q6ZSS7 791 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 CCDC150Q8NCX0 1101 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 CCDC112Q8NEF3 446 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 ANKRD7Q92527 254 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.57■□□□□ 0.08
PPME1-208ENST00000543525 ARMT1Q9H993 441 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 EPB41L4AQ9HCS5 686 aaPredicted RBP15.57■□□□□ 0.08
PPME1-208ENST00000543525 HPSEQ9Y251 543 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 MROH7-TTC4A0A0A0MT08 1334 aa15.57■□□□□ 0.08
PPME1-208ENST00000543525 MYO5AQ9Y4I1 1855 aaKnown RBP15.57■□□□□ 0.08
PPME1-208ENST00000543525 BIN1O00499 593 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 FMNL1O95466 1100 aaPredicted RBP15.56■□□□□ 0.08
PPME1-208ENST00000543525 CTDSPL2Q05D32 466 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 SART3Q15020 963 aaKnown RBP15.56■□□□□ 0.08
PPME1-208ENST00000543525 PTPN14Q15678 1187 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 PARP10Q53GL7 1025 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 SUSD4Q5VX71 490 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 RESP18Q5W5W9 173 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 MAP3K14Q99558 947 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 FAM217BQ9NTX9 383 aaPredicted RBP15.56■□□□□ 0.08
PPME1-208ENST00000543525 ZSWIM5Q9P217 1185 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 TUBE1Q9UJT0 475 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 PLCH1Q4KWH8 1693 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 NID2Q14112 1375 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 GSG1L2A8MUP6 293 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 NRDCO43847 1150 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 RANBP6O60518 1105 aaKnown RBP15.56■□□□□ 0.08
PPME1-208ENST00000543525 EIF5P55010 431 aaKnown RBP15.56■□□□□ 0.08
PPME1-208ENST00000543525 SAFBQ15424 915 aaKnown RBP eCLIP15.56■□□□□ 0.08
PPME1-208ENST00000543525 CCDC152Q4G0S7 254 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 NBPF11Q86T75 865 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 PDCL2Q8N4E4 241 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 MTA3Q9BTC8 594 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 SLC26A6Q9BXS9 759 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 XPO4Q9C0E2 1151 aaKnown RBP15.56■□□□□ 0.08
PPME1-208ENST00000543525 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.56■□□□□ 0.08
PPME1-208ENST00000543525 CCDC87Q9NVE4 849 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 IFNKQ9P0W0 207 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 TIAM2Q8IVF5 1701 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 PNPLA7Q6ZV29 1317 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 DOCK2Q92608 1830 aa15.56■□□□□ 0.08
PPME1-208ENST00000543525 KIF2AO00139 706 aaPredicted RBP15.55■□□□□ 0.08
PPME1-208ENST00000543525 IFNAR1P17181 557 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 IGHMBP2P38935 993 aaKnown RBP15.55■□□□□ 0.08
PPME1-208ENST00000543525 TDO2P48775 406 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 SHC4Q6S5L8 630 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 STAG1Q8WVM7 1258 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 SLIT2O94813 1529 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 ERICH2A1L162 156 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 PSDA5PKW4 1024 aaPredicted RBP15.55■□□□□ 0.08
PPME1-208ENST00000543525 TMC6Q7Z403 805 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 TRIM22Q8IYM9 498 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 CCAR2Q8N163 923 aaKnown RBP15.55■□□□□ 0.08
PPME1-208ENST00000543525 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
PPME1-208ENST00000543525 TMTC2Q8N394 836 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 MYL10Q9BUA6 226 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 RNF41Q9H4P4 317 aaPredicted RBP15.55■□□□□ 0.08
PPME1-208ENST00000543525 INCENPQ9NQS7 918 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 SLC4A4Q9Y6R1 1079 aa15.55■□□□□ 0.08
PPME1-208ENST00000543525 CBFA2T2O43439 604 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 NCAPHQ15003 741 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 WTAPQ15007 396 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 RTN1Q16799 776 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 NYAP1Q6ZVC0 841 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 SEPT12Q8IYM1 358 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 RTL9Q8NET4 1388 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 ARID3AQ99856 593 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 SEC31BQ9NQW1 1179 aa15.54■□□□□ 0.08
PPME1-208ENST00000543525 HOOK1Q9UJC3 728 aaKnown RBP15.54■□□□□ 0.08
PPME1-208ENST00000543525 ECM29Q5VYK3 1845 aa15.53■□□□□ 0.08
PPME1-208ENST00000543525 CCDC196A0A1B0GTZ2 297 aa15.53■□□□□ 0.08
PPME1-208ENST00000543525 MYO1BO43795 1136 aa15.53■□□□□ 0.08
PPME1-208ENST00000543525 RCAN1P53805 252 aa15.53■□□□□ 0.08
PPME1-208ENST00000543525 INTS5Q6P9B9 1019 aaKnown RBP15.53■□□□□ 0.08
PPME1-208ENST00000543525 OLFM4Q6UX06 510 aa15.53■□□□□ 0.08
PPME1-208ENST00000543525 NOSTRINQ8IVI9 506 aa15.53■□□□□ 0.08
PPME1-208ENST00000543525 ELOA2Q8IYF1 753 aaPredicted RBP15.53■□□□□ 0.08
PPME1-208ENST00000543525 KRI1Q8N9T8 703 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms