RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PARD6BQ9BYG5 372 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 MTMR6Q9Y217 621 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 CCT5P48643 541 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 HAND2P61296 217 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 APOBRQ0VD83 1088 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 PI16Q6UXB8 463 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 STRCP1A6NGW2 1772 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 IFIT1P09914 478 aaKnown RBP12.88□□□□□ -0.35
CDH4-201ENST00000543233 WASHC4Q2M389 1173 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 WWC2Q6AWC2 1192 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 BRF1Q92994 677 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 SH3GL3Q99963 347 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 RPS6KL1Q9Y6S9 549 aa12.88□□□□□ -0.35
CDH4-201ENST00000543233 COL15A1P39059 1388 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 C21orf2O43822 256 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 CYP21A2P08686 494 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 ADORA1P30542 326 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 CASP7P55210 303 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 CCDC93Q567U6 631 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 CABS1Q96KC9 395 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 ADCY2Q08462 1091 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 RABL6Q3YEC7 729 aaPredicted RBP12.87□□□□□ -0.35
CDH4-201ENST00000543233 Q6ZUG5 572 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 KIF9Q9HAQ2 790 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 PAG1Q9NWQ8 432 aa12.87□□□□□ -0.35
CDH4-201ENST00000543233 H7C1W4 665 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 MYBL2P10244 700 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 ARMC2Q8NEN0 867 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 ZBTB10Q96DT7 871 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 FAM204AQ9H8W3 233 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 G3BP2Q9UN86 482 aaKnown RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 C5P01031 1676 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 A0A1B0GUA9 196 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 EBAG9O00559 213 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 TOB2Q14106 344 aaPredicted RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 MCMDC2Q4G0Z9 681 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 TDRD7Q8NHU6 1098 aaKnown RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 PIGBQ92521 554 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 ZSCAN31Q96LW9 406 aaPredicted RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 SH2B1Q9NRF2 756 aaPredicted RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 CEP126Q9P2H0 1117 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 CAMTA1Q9Y6Y1 1673 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 EXOC5O00471 708 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 GUCY1B3Q02153 619 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 SNX1Q13596 522 aa12.86□□□□□ -0.35
CDH4-201ENST00000543233 RBBP5Q15291 538 aaKnown RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 LRRFIP1Q32MZ4 808 aaKnown RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 E4F1Q66K89 784 aaPredicted RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 BIN2Q9UBW5 565 aaPredicted RBP12.86□□□□□ -0.35
CDH4-201ENST00000543233 ZNF609O15014 1411 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 MYO1FO00160 1098 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 EYA2O00167 538 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
CDH4-201ENST00000543233 RPS6KA5O75582 802 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 ACTN3Q08043 901 aaPredicted RBP12.85□□□□□ -0.35
CDH4-201ENST00000543233 TM6SF1Q9BZW5 370 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 ETF1P62495 437 aaKnown RBP12.85□□□□□ -0.35
CDH4-201ENST00000543233 HLFQ16534 295 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 ZNF483Q8TF39 744 aaPredicted RBP12.85□□□□□ -0.35
CDH4-201ENST00000543233 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
CDH4-201ENST00000543233 HAUS7Q99871 368 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 NCOA5Q9HCD5 579 aaKnown RBP12.85□□□□□ -0.35
CDH4-201ENST00000543233 MCM8Q9UJA3 840 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDH4-201ENST00000543233 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
CDH4-201ENST00000543233 ADAMTS2O95450 1211 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 PPP2R3AQ06190 1150 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 KBTBD3Q8NAB2 608 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 HELBQ8NG08 1087 aaPredicted RBP12.84□□□□□ -0.35
CDH4-201ENST00000543233 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 STAG1Q8WVM7 1258 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 KINO60870 393 aaKnown RBP12.84□□□□□ -0.35
CDH4-201ENST00000543233 SFPQP23246 707 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDH4-201ENST00000543233 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 STOX1Q6ZVD7 989 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 TACO1Q9BSH4 297 aaKnown RBP12.84□□□□□ -0.35
CDH4-201ENST00000543233 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.84□□□□□ -0.35
CDH4-201ENST00000543233 MED23Q9ULK4 1368 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 ENO4A6NNW6 628 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 H3BQV1 296 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 IL15P40933 162 aaPredicted RBP12.84□□□□□ -0.35
CDH4-201ENST00000543233 TTC39AQ5SRH9 613 aa12.84□□□□□ -0.35
CDH4-201ENST00000543233 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms