RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 SDCCAG3Q96C92 435 aa21.54■■□□□ 1.04
HDAC4-215ENST00000543185 EFCAB8A8MWE9 144 aa21.54■■□□□ 1.04
HDAC4-215ENST00000543185 SV2BQ7L1I2 683 aa21.54■■□□□ 1.04
HDAC4-215ENST00000543185 RHPN1Q8TCX5 695 aa21.54■■□□□ 1.04
HDAC4-215ENST00000543185 ANKRD44Q8N8A2 993 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 HAUS3Q68CZ6 603 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 DHX32Q7L7V1 743 aaKnown RBP21.53■■□□□ 1.04
HDAC4-215ENST00000543185 NUDT16Q96DE0 195 aaKnown RBP21.53■■□□□ 1.04
HDAC4-215ENST00000543185 EPS15L1Q9UBC2 864 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 RNASELQ05823 741 aaKnown RBP21.53■■□□□ 1.04
HDAC4-215ENST00000543185 UAP1Q16222 522 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-215ENST00000543185 C8orf34Q49A92 452 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 ERCC3P19447 782 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 CCDC89Q8N998 374 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 BANK1Q8NDB2 785 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 STAG1Q8WVM7 1258 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 HSP90AA4PQ58FG1 418 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 RGS16O15492 202 aaPredicted RBP21.53■■□□□ 1.04
HDAC4-215ENST00000543185 DBN1Q16643 649 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
HDAC4-215ENST00000543185 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.52■■□□□ 1.04
HDAC4-215ENST00000543185 ARHGAP4P98171 946 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 DEUP1Q05D60 604 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 PPANQ9NQ55 473 aaKnown RBP21.52■■□□□ 1.04
HDAC4-215ENST00000543185 RBSNQ9H1K0 784 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 PAG1Q9NWQ8 432 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 BCRP11274 1271 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 GNA14O95837 355 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 HAND2P61296 217 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 RUNDC3BQ96NL0 473 aa21.52■■□□□ 1.04
HDAC4-215ENST00000543185 CCDC85AQ96PX6 553 aaPredicted RBP21.52■■□□□ 1.04
HDAC4-215ENST00000543185 CTNND2Q9UQB3 1225 aa21.52■■□□□ 1.03
HDAC4-215ENST00000543185 CCDC117Q8IWD4 279 aaPredicted RBP21.51■■□□□ 1.03
HDAC4-215ENST00000543185 OPHN1O60890 802 aa21.51■■□□□ 1.03
HDAC4-215ENST00000543185 PFDN1O60925 122 aa21.51■■□□□ 1.03
HDAC4-215ENST00000543185 MCM7P33993 719 aa21.51■■□□□ 1.03
HDAC4-215ENST00000543185 TYW1Q9NV66 732 aaKnown RBP21.51■■□□□ 1.03
HDAC4-215ENST00000543185 CDK13Q14004 1512 aaKnown RBP21.51■■□□□ 1.03
HDAC4-215ENST00000543185 RAPGEF1Q13905 1077 aa21.51■■□□□ 1.03
HDAC4-215ENST00000543185 GRK7Q8WTQ7 553 aa21.51■■□□□ 1.03
HDAC4-215ENST00000543185 PLXNC1O60486 1568 aa21.51■■□□□ 1.03
HDAC4-215ENST00000543185 SAR1BQ9Y6B6 198 aa21.51■■□□□ 1.03
HDAC4-215ENST00000543185 PPP2R5BQ15173 497 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 CAPN7Q9Y6W3 813 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 IL15P40933 162 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-215ENST00000543185 PRG4Q92954 1404 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-215ENST00000543185 KRT3P12035 628 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 CLSTN2Q9H4D0 955 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 PPP1R9AQ9ULJ8 1098 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 NUTM2BA6NNL0 878 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-215ENST00000543185 NUTM2EB1AL46 878 aaPredicted RBP21.5■■□□□ 1.03
HDAC4-215ENST00000543185 ATP8B1O43520 1251 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 GJC1P36383 396 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 ZC3H15Q8WU90 426 aaKnown RBP21.5■■□□□ 1.03
HDAC4-215ENST00000543185 IFIH1Q9BYX4 1025 aaKnown RBP21.5■■□□□ 1.03
HDAC4-215ENST00000543185 MIS18AQ9NYP9 233 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 DDX41Q9UJV9 622 aaKnown RBP21.5■■□□□ 1.03
HDAC4-215ENST00000543185 ABCC5O15440 1437 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 CCT6AP40227 531 aaKnown RBP21.5■■□□□ 1.03
HDAC4-215ENST00000543185 SLMAPQ14BN4 828 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 LDHAL6AQ6ZMR3 332 aa21.5■■□□□ 1.03
HDAC4-215ENST00000543185 U2AF2P26368 475 aaKnown RBP eCLIP21.49■■□□□ 1.033e-6■■■□□ 15.4
HDAC4-215ENST00000543185 FAF1Q9UNN5 650 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-215ENST00000543185 ASIC2Q16515 512 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 TRIM37O94972 964 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 KRT71Q3SY84 523 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 MBIPQ9NS73 344 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 ALDH1L1O75891 902 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 WHAMMQ8TF30 809 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 CAPS2Q9BXY5 557 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 TBC1D8BQ0IIM8 1120 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 PAK1Q13153 545 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 DCAF17Q5H9S7 520 aaPredicted RBP21.49■■□□□ 1.03
HDAC4-215ENST00000543185 RSPH3Q86UC2 560 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 ASIC3Q9UHC3 531 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 EXOC7Q9UPT5 735 aa21.49■■□□□ 1.03
HDAC4-215ENST00000543185 F6X3S4 739 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 AK2P54819 239 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 NECAB1Q8N987 351 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 ZNF500O60304 480 aaPredicted RBP21.48■■□□□ 1.03
HDAC4-215ENST00000543185 STX2P32856 288 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 PLCD3Q8N3E9 789 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 FAM69CQ0P6D2 419 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 RIPOR2Q9Y4F9 1068 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 CCDC125Q86Z20 511 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 BAIAP2L1Q9UHR4 511 aa21.48■■□□□ 1.03
HDAC4-215ENST00000543185 CTNNA1P35221 906 aaKnown RBP21.47■■□□□ 1.03
HDAC4-215ENST00000543185 VEZTQ9HBM0 779 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 KRT15P19012 456 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 ZC3H6P61129 1189 aaKnown RBP21.47■■□□□ 1.03
HDAC4-215ENST00000543185 TXNDC9O14530 226 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 DMTNQ08495 405 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 NRBF2Q96F24 287 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 TMOD4Q9NZQ9 345 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 IGHDP01880 384 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 KCNH3Q9ULD8 1083 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 CDAN1Q8IWY9 1227 aa21.47■■□□□ 1.03
HDAC4-215ENST00000543185 GRM8O00222 908 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms