RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 CHRNDQ07001 517 aa21.58■■□□□ 1.04
COPS7A-215ENST00000543155 SSRP1Q08945 709 aaKnown RBP21.58■■□□□ 1.04
COPS7A-215ENST00000543155 MTERF4Q7Z6M4 381 aaKnown RBP21.58■■□□□ 1.04
COPS7A-215ENST00000543155 MARCH10Q8NA82 808 aaPredicted RBP21.58■■□□□ 1.04
COPS7A-215ENST00000543155 CACTINQ8WUQ7 758 aaKnown RBP21.58■■□□□ 1.04
COPS7A-215ENST00000543155 TACC3Q9Y6A5 838 aa21.58■■□□□ 1.04
COPS7A-215ENST00000543155 CASZ1Q86V15 1759 aa21.58■■□□□ 1.04
COPS7A-215ENST00000543155 FMNL1O95466 1100 aaPredicted RBP21.57■■□□□ 1.04
COPS7A-215ENST00000543155 U2AF2P26368 475 aaKnown RBP eCLIP21.57■■□□□ 1.04
COPS7A-215ENST00000543155 TIGD1Q96MW7 591 aa21.57■■□□□ 1.04
COPS7A-215ENST00000543155 MYL10Q9BUA6 226 aa21.57■■□□□ 1.04
COPS7A-215ENST00000543155 ZNF652Q9Y2D9 606 aa21.57■■□□□ 1.04
COPS7A-215ENST00000543155 PRKAB2O43741 272 aa21.56■■□□□ 1.04
COPS7A-215ENST00000543155 WDHD1O75717 1129 aaPredicted RBP21.56■■□□□ 1.04
COPS7A-215ENST00000543155 WASF1Q92558 559 aa21.56■■□□□ 1.04
COPS7A-215ENST00000543155 MTA3Q9BTC8 594 aa21.56■■□□□ 1.04
COPS7A-215ENST00000543155 NLRP12P59046 1061 aa21.56■■□□□ 1.04
COPS7A-215ENST00000543155 RBM6P78332 1123 aaKnown RBP21.56■■□□□ 1.04
COPS7A-215ENST00000543155 SART3Q15020 963 aaKnown RBP21.56■■□□□ 1.04
COPS7A-215ENST00000543155 CDC5LQ99459 802 aaKnown RBP21.56■■□□□ 1.04
COPS7A-215ENST00000543155 LRP2BPQ9P2M1 347 aa21.56■■□□□ 1.04
COPS7A-215ENST00000543155 ZNF831Q5JPB2 1677 aa21.56■■□□□ 1.04
COPS7A-215ENST00000543155 COL4A1P02462 1669 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 IFNAR1P17181 557 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 MARCKSP29966 332 aaPredicted RBP21.55■■□□□ 1.04
COPS7A-215ENST00000543155 PTPAQ15257 358 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 DPCR1Q3MIW9 517 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 FBXW7Q969H0 707 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 MAP3K14Q99558 947 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 SLC26A6Q9BXS9 759 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 ADAMTS2O95450 1211 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 LRRC8AQ8IWT6 810 aa21.55■■□□□ 1.04
COPS7A-215ENST00000543155 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.55■■□□□ 1.04
COPS7A-215ENST00000543155 RNF41Q9H4P4 317 aaPredicted RBP21.55■■□□□ 1.04
COPS7A-215ENST00000543155 SMARCC1Q92922 1105 aaPredicted RBP21.54■■□□□ 1.04
COPS7A-215ENST00000543155 HPSEQ9Y251 543 aa21.54■■□□□ 1.04
COPS7A-215ENST00000543155 FAM237AA0A1B0GTK4 181 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 SYKP43405 635 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 WTAPQ15007 396 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 RRP12Q5JTH9 1297 aaKnown RBP21.53■■□□□ 1.04
COPS7A-215ENST00000543155 ZNF804BA4D1E1 1349 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 SPATA31A5Q5VU36 1347 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 SPATA31A7Q8IWB4 1347 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 SCN7AQ01118 1682 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 ERICH2A1L162 156 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 RCAN1P53805 252 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 RTN1Q16799 776 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 MIGA1Q8NAN2 632 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 TOMM22Q9NS69 142 aa21.53■■□□□ 1.04
COPS7A-215ENST00000543155 TPM4P67936 248 aa21.52■■□□□ 1.04
COPS7A-215ENST00000543155 TRIM22Q8IYM9 498 aa21.52■■□□□ 1.04
COPS7A-215ENST00000543155 TMTC2Q8N394 836 aa21.52■■□□□ 1.04
COPS7A-215ENST00000543155 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.52■■□□□ 1.04
COPS7A-215ENST00000543155 CUTAO60888 179 aa21.52■■□□□ 1.03
COPS7A-215ENST00000543155 CYP7A1P22680 504 aa21.52■■□□□ 1.03
COPS7A-215ENST00000543155 RESP18Q5W5W9 173 aa21.52■■□□□ 1.03
COPS7A-215ENST00000543155 SHC4Q6S5L8 630 aa21.52■■□□□ 1.03
COPS7A-215ENST00000543155 GNL3LQ9NVN8 582 aaKnown RBP21.52■■□□□ 1.03
COPS7A-215ENST00000543155 PPARAQ07869 468 aa21.51■■□□□ 1.03
COPS7A-215ENST00000543155 CLEC4GQ6UXB4 293 aa21.51■■□□□ 1.03
COPS7A-215ENST00000543155 TAOK2Q9UL54 1235 aa21.51■■□□□ 1.03
COPS7A-215ENST00000543155 SMTNL1A8MU46 457 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 BIN1O00499 593 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 MMP1P03956 469 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 SAFBQ15424 915 aaKnown RBP eCLIP21.5■■□□□ 1.03
COPS7A-215ENST00000543155 GLIPR1L2Q4G1C9 344 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 BARGINQ6ZT62 677 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 ANKRD18AQ8IVF6 992 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 NOSTRINQ8IVI9 506 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 ZKSCAN3Q9BRR0 538 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 CACNA1SQ13698 1873 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 CCDC196A0A1B0GTZ2 297 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 RIOK3O14730 519 aaKnown RBP21.5■■□□□ 1.03
COPS7A-215ENST00000543155 TUBE1Q9UJT0 475 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 ANAPC4Q9UJX5 808 aa21.5■■□□□ 1.03
COPS7A-215ENST00000543155 MAGEB6P1A0A0J9YX57 407 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 GSDMDP57764 484 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 IMPACTQ9P2X3 320 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 COL1A1P02452 1464 aaPredicted RBP21.49■■□□□ 1.03
COPS7A-215ENST00000543155 UBE2Q2LH0YL09 131 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 DEXIO95424 95 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 UBE4AQ14139 1066 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 SF3B3Q15393 1217 aaKnown RBP21.49■■□□□ 1.03
COPS7A-215ENST00000543155 FILIP1Q7Z7B0 1213 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 ADGRA1Q86SQ6 560 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 C16orf45Q96MC5 204 aaPredicted RBP21.49■■□□□ 1.03
COPS7A-215ENST00000543155 RAI14Q9P0K7 980 aa21.49■■□□□ 1.03
COPS7A-215ENST00000543155 DUOX1Q9NRD9 1551 aa21.48■■□□□ 1.03
COPS7A-215ENST00000543155 IKBKBO14920 756 aa21.48■■□□□ 1.03
COPS7A-215ENST00000543155 ARID5BQ14865 1188 aa21.48■■□□□ 1.03
COPS7A-215ENST00000543155 TPD52L1Q16890 204 aaPredicted RBP21.48■■□□□ 1.03
COPS7A-215ENST00000543155 ERFEQ4G0M1 354 aa21.48■■□□□ 1.03
COPS7A-215ENST00000543155 NBPF11Q86T75 865 aa21.48■■□□□ 1.03
COPS7A-215ENST00000543155 UBAC1Q9BSL1 405 aa21.48■■□□□ 1.03
COPS7A-215ENST00000543155 OSBPL5Q9H0X9 879 aaPredicted RBP21.48■■□□□ 1.03
COPS7A-215ENST00000543155 ABCF2Q9UG63 623 aa21.48■■□□□ 1.03
COPS7A-215ENST00000543155 IQSEC3Q9UPP2 1182 aaPredicted RBP21.48■■□□□ 1.03
COPS7A-215ENST00000543155 MYH6P13533 1939 aa21.48■■□□□ 1.03
COPS7A-215ENST00000543155 GUCY1A2P33402 732 aa21.47■■□□□ 1.03
COPS7A-215ENST00000543155 DIS3L2Q8IYB7 885 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms