RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SF3A1Q15459 793 aaKnown RBP11.07□□□□□ -0.64
CNOT4-212ENST00000541284 VPS37DQ86XT2 251 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 CCDC112Q8NEF3 446 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 TMX1Q9H3N1 280 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 L2HGDHQ9H9P8 463 aa11.07□□□□□ -0.64
CNOT4-212ENST00000541284 DDX41Q9UJV9 622 aaKnown RBP11.07□□□□□ -0.64
CNOT4-212ENST00000541284 BIN1O00499 593 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 IKBKBO14920 756 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 ITGA6P23229 1130 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 KRT40Q6A162 431 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 METTL16Q86W50 562 aaKnown RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 PPP1R13BQ96KQ4 1090 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 INTS13Q9NVM9 706 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 TRMT1Q9NXH9 659 aaKnown RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 PPP6R2O75170 966 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 SLC3A2P08195 630 aaKnown RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 RXRAP19793 462 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 PHKA1P46020 1223 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 CTSWP56202 376 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 GSDMDP57764 484 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 MDM2Q00987 491 aaPredicted RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 IFIT5Q13325 482 aaKnown RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 UBE3CQ15386 1083 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 KMT5BQ4FZB7 885 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 RESP18Q5W5W9 173 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 TEX13AQ9BXU3 409 aaPredicted RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 DHX16O60231 1041 aaKnown RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 MARCKSP29966 332 aaPredicted RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 PTPN14Q15678 1187 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 SGMS1Q86VZ5 419 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 TMEM139Q8IV31 216 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 PHKBQ93100 1093 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 AK7Q96M32 723 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 STRBPQ96SI9 672 aaKnown RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 NAT10Q9H0A0 1025 aaKnown RBP11.06□□□□□ -0.64
CNOT4-212ENST00000541284 MYH2Q9UKX2 1941 aa11.06□□□□□ -0.64
CNOT4-212ENST00000541284 ZNF532Q9HCE3 1301 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 PDE6AP16499 860 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 FEZ1Q99689 392 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 ALG1Q9BT22 464 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 ALX1Q15699 326 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 LRRFIP1Q32MZ4 808 aaKnown RBP11.05□□□□□ -0.64
CNOT4-212ENST00000541284 SLC9C2Q5TAH2 1124 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 SHISA4Q96DD7 197 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 CLIC6Q96NY7 704 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.05□□□□□ -0.64
CNOT4-212ENST00000541284 NAV1Q8NEY1 1877 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 B4E1Z4 1266 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 IL6STP40189 918 aaPredicted RBP11.05□□□□□ -0.64
CNOT4-212ENST00000541284 TOB1P50616 345 aaPredicted RBP11.05□□□□□ -0.64
CNOT4-212ENST00000541284 CCDC102BQ68D86 513 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 KIF18AQ8NI77 898 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 ZNF446Q9NWS9 450 aa11.05□□□□□ -0.64
CNOT4-212ENST00000541284 MORC2Q9Y6X9 1032 aaPredicted RBP11.05□□□□□ -0.64
CNOT4-212ENST00000541284 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
CNOT4-212ENST00000541284 PDE8BO95263 885 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 FANCCQ00597 558 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 PDE4BQ07343 736 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 METTL24Q5JXM2 366 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 TMC6Q7Z403 805 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 STK11IPQ8N1F8 1099 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 MED15Q96RN5 788 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.04□□□□□ -0.64
CNOT4-212ENST00000541284 METAP2P50579 478 aaKnown RBP eCLIP11.04□□□□□ -0.64
CNOT4-212ENST00000541284 VPS72Q15906 364 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 GORABQ5T7V8 394 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 RALYLQ86SE5 291 aaKnown RBP11.04□□□□□ -0.64
CNOT4-212ENST00000541284 OGFRQ9NZT2 677 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 STK36Q9NRP7 1315 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 SIPA1L1O43166 1804 aa11.04□□□□□ -0.64
CNOT4-212ENST00000541284 FOXN1O15353 648 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 CAMTA2O94983 1202 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 GUCY1A2P33402 732 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 GRIN1Q05586 938 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 PNOCQ13519 176 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 TRIM65Q6PJ69 517 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 LDHAL6AQ6ZMR3 332 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 CCDC150Q8NCX0 1101 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 MYL10Q9BUA6 226 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
CNOT4-212ENST00000541284 GPTP24298 496 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 ITPK1Q13572 414 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 LONRF3Q496Y0 759 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 ISM2Q6H9L7 571 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 FBXO38Q6PIJ6 1188 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 ZNF592Q92610 1267 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 TMEM232C9JQI7 657 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 LMOD1P29536 600 aaPredicted RBP11.03□□□□□ -0.64
CNOT4-212ENST00000541284 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
CNOT4-212ENST00000541284 ERO1AQ96HE7 468 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 TMOD3Q9NYL9 352 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.03□□□□□ -0.64
CNOT4-212ENST00000541284 V9GYY5 206 aaPredicted RBP11.03□□□□□ -0.64
CNOT4-212ENST00000541284 CNTNAP4Q9C0A0 1308 aa11.03□□□□□ -0.64
CNOT4-212ENST00000541284 CPLX1O14810 134 aa11.02□□□□□ -0.64
CNOT4-212ENST00000541284 SYKP43405 635 aa11.02□□□□□ -0.64
CNOT4-212ENST00000541284 TMEM87BQ96K49 555 aa11.02□□□□□ -0.64
CNOT4-212ENST00000541284 GTPBP4Q9BZE4 634 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms