RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 DLL1O00548 723 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 VIL1P09327 827 aaKnown RBP6.1□□□□□ -1.43
SNHG1-214ENST00000540865 HSPA5P11021 654 aaKnown RBP6.1□□□□□ -1.43
SNHG1-214ENST00000540865 VARSP26640 1264 aaKnown RBP6.1□□□□□ -1.43
SNHG1-214ENST00000540865 PRKAR2BP31323 418 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 SREBF2Q12772 1141 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 ARID5BQ14865 1188 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 TAF7Q15545 349 aaPredicted RBP6.1□□□□□ -1.43
SNHG1-214ENST00000540865 MCM10Q7L590 875 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 ZSCAN1Q8NBB4 408 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 PNISRQ8TF01 805 aaKnown RBP6.1□□□□□ -1.43
SNHG1-214ENST00000540865 KIFC2Q96AC6 838 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 RRP7AQ9Y3A4 280 aaKnown RBP6.1□□□□□ -1.43
SNHG1-214ENST00000540865 GPSM3Q9Y4H4 160 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 PCDHB9Q9Y5E1 797 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 TRIOBPQ9H2D6 2365 aa6.1□□□□□ -1.43
SNHG1-214ENST00000540865 CEP290O15078 2479 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 ERBB4Q15303 1308 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 PITPNM2Q9BZ72 1349 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 UBE2Q2LH0YL09 131 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 SIAH2O43255 324 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 TRAK2O60296 914 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 ECE2O60344 883 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 ALDH1A1P00352 501 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 MYL6BP14649 208 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 ZNF280AP59817 542 aaPredicted RBP6.09□□□□□ -1.43
SNHG1-214ENST00000540865 SCARF1Q14162 830 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 FAM174AQ8TBP5 190 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 EYA3Q99504 573 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 C1QTNF2Q9BXJ5 285 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 DBNDD1Q9H9R9 158 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 TRIM17Q9Y577 477 aa6.09□□□□□ -1.43
SNHG1-214ENST00000540865 COL3A1P02461 1466 aaPredicted RBP6.09□□□□□ -1.44
SNHG1-214ENST00000540865 RTL9Q8NET4 1388 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 ASTN2O75129 1339 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-214ENST00000540865 HCLS1P14317 486 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-214ENST00000540865 EN2P19622 333 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-214ENST00000540865 INHBEP58166 350 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 DCTN1Q14203 1278 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 HSP90AB3PQ58FF7 597 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 ANGEL2Q5VTE6 544 aaKnown RBP6.08□□□□□ -1.44
SNHG1-214ENST00000540865 MOB2Q70IA6 237 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 OTOP1Q7RTM1 612 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 SLC17A8Q8NDX2 589 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 AGBL3Q8NEM8 1001 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 ADAMTS19Q8TE59 1207 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 ARMC5Q96C12 935 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 R3HDMLQ9H3Y0 253 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 KCNQ5Q9NR82 932 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 POLLQ9UGP5 575 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 NSFL1CQ9UNZ2 370 aaKnown RBP6.08□□□□□ -1.44
SNHG1-214ENST00000540865 COL6A3P12111 3177 aa6.08□□□□□ -1.44
SNHG1-214ENST00000540865 SIPA1L3O60292 1781 aaPredicted RBP6.08□□□□□ -1.44
SNHG1-214ENST00000540865 SH3TC1Q8TE82 1336 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 LAMA3Q16787 3333 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 BMP1P13497 986 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 EIF4A1P60842 406 aaKnown RBP6.07□□□□□ -1.44
SNHG1-214ENST00000540865 GPSM2P81274 684 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 CC2D1BQ5T0F9 858 aaKnown RBP6.07□□□□□ -1.44
SNHG1-214ENST00000540865 NLRP10Q86W26 655 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 WWC1Q8IX03 1113 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 TBC1D16Q8TBP0 767 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 ERO1AQ96HE7 468 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 ZC3H12CQ9C0D7 883 aaKnown RBP6.07□□□□□ -1.44
SNHG1-214ENST00000540865 MIS18AQ9NYP9 233 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 NXF1Q9UBU9 619 aaKnown RBP6.07□□□□□ -1.44
SNHG1-214ENST00000540865 TRMT112Q9UI30 125 aaKnown RBP6.07□□□□□ -1.44
SNHG1-214ENST00000540865 NUDCQ9Y266 331 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 PTPN22Q9Y2R2 807 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 KIAA0100Q14667 2235 aaKnown RBP6.07□□□□□ -1.44
SNHG1-214ENST00000540865 ZNF609O15014 1411 aa6.07□□□□□ -1.44
SNHG1-214ENST00000540865 MANSC4A6NHS7 340 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-214ENST00000540865 H0YGN5 161 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 NF2P35240 595 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 RAB15P59190 212 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 TCIRG1Q13488 830 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 SF3B3Q15393 1217 aaKnown RBP6.06□□□□□ -1.44
SNHG1-214ENST00000540865 VASH1Q7L8A9 365 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-214ENST00000540865 ARMC9Q7Z3E5 817 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 LRP10Q7Z4F1 713 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 TRMT44Q8IYL2 757 aaKnown RBP6.06□□□□□ -1.44
SNHG1-214ENST00000540865 SLC10A4Q96EP9 437 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 CFAP53Q96M91 514 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 GMLQ99445 158 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 MYOZ2Q9NPC6 264 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 PODXL2Q9NZ53 605 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 PAPPA2Q9BXP8 1791 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 DUOX1Q9NRD9 1551 aa6.06□□□□□ -1.44
SNHG1-214ENST00000540865 AKAP11Q9UKA4 1901 aa6.05□□□□□ -1.44
SNHG1-214ENST00000540865 U2AF1L5P0DN76 240 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-214ENST00000540865 U2AF1Q01081 240 aaKnown RBP eCLIP6.05□□□□□ -1.443e-8■■■□□ 17.9
SNHG1-214ENST00000540865 PTPN12Q05209 780 aaKnown RBP6.05□□□□□ -1.44
SNHG1-214ENST00000540865 LDLRAD1Q5T700 205 aa6.05□□□□□ -1.44
SNHG1-214ENST00000540865 HDGFL1Q5TGJ6 251 aa6.05□□□□□ -1.44
SNHG1-214ENST00000540865 ERICH6Q7L0X2 663 aa6.05□□□□□ -1.44
SNHG1-214ENST00000540865 CELF1Q92879 486 aaKnown RBP6.05□□□□□ -1.44
SNHG1-214ENST00000540865 IRF7Q92985 503 aa6.05□□□□□ -1.44
SNHG1-214ENST00000540865 GLMNQ92990 594 aa6.05□□□□□ -1.44
SNHG1-214ENST00000540865 ZNF333Q96JL9 665 aa6.05□□□□□ -1.44
SNHG1-214ENST00000540865 ALG2Q9H553 416 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms