RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 AKNAD1Q5T1N1 836 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 TBC1D9BQ66K14 1250 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 AMIGO3Q86WK7 504 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 STAG1Q8WVM7 1258 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 CBX8Q9HC52 389 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 GNL3LQ9NVN8 582 aaKnown RBP13.14□□□□□ -0.31
LGR5-203ENST00000540815 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 LRP2BPQ9P2M1 347 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
LGR5-203ENST00000540815 SLC4A4Q9Y6R1 1079 aa13.14□□□□□ -0.31
LGR5-203ENST00000540815 NHSQ6T4R5 1651 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 ZBTB43O43298 467 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 CAVIN2O95810 425 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 ME1P48163 572 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 FAM160A1Q05DH4 1040 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 TMEM67Q5HYA8 995 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 RC3H1Q5TC82 1133 aaKnown RBP13.13□□□□□ -0.31
LGR5-203ENST00000540815 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
LGR5-203ENST00000540815 BICDL1Q6ZP65 573 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 NID2Q14112 1375 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 A0A1W2PQ27 194 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 A0A1W2PQ64 194 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 A0A1W2PQD8 194 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 YEATS4O95619 227 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
LGR5-203ENST00000540815 CHAF1AQ13111 956 aaPredicted RBP13.13□□□□□ -0.31
LGR5-203ENST00000540815 MYSM1Q5VVJ2 828 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 SPTLC3Q9NUV7 552 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 ZSWIM5Q9P217 1185 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 SRP68Q9UHB9 627 aaKnown RBP13.13□□□□□ -0.31
LGR5-203ENST00000540815 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
LGR5-203ENST00000540815 CDC27P30260 824 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 TDO2P48775 406 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 NFXL1Q6ZNB6 911 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 MFSD6Q6ZSS7 791 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 ADGRA1Q86SQ6 560 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 KCNG4Q8TDN1 519 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 GYG1P46976 350 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 LUZP1Q86V48 1076 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 FNBP4Q8N3X1 1017 aaPredicted RBP13.12□□□□□ -0.31
LGR5-203ENST00000540815 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 TDRD7Q8NHU6 1098 aaKnown RBP13.12□□□□□ -0.31
LGR5-203ENST00000540815 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 MTA3Q9BTC8 594 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 THSD7AQ9UPZ6 1657 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 GOLGA8AA7E2F4 631 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 KIF28PB7ZC32 967 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
LGR5-203ENST00000540815 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
LGR5-203ENST00000540815 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
LGR5-203ENST00000540815 RXRAP19793 462 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 CYP7A1P22680 504 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 STK38Q15208 465 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 NTRK3Q16288 839 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 MICU3Q86XE3 530 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 MRPS27Q92552 414 aaKnown RBP13.12□□□□□ -0.31
LGR5-203ENST00000540815 CELF1Q92879 486 aaKnown RBP13.12□□□□□ -0.31
LGR5-203ENST00000540815 NYXQ9GZU5 481 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 MINPP1Q9UNW1 487 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 CLIC4Q9Y696 253 aa13.12□□□□□ -0.31
LGR5-203ENST00000540815 STK36Q9NRP7 1315 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 UBAP1LF5GYI3 381 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 CAPN2P17655 700 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
LGR5-203ENST00000540815 OGFRQ9NZT2 677 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 SLC12A7Q9Y666 1083 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 MIGA1Q8NAN2 632 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 AIFM3Q96NN9 605 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
LGR5-203ENST00000540815 MYH13Q9UKX3 1938 aa13.11□□□□□ -0.31
LGR5-203ENST00000540815 TPM3P06753 285 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 ZNF165P49910 485 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 STX1AQ16623 288 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 SYNE3Q6ZMZ3 975 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 FMR1NBQ8N0W7 255 aaPredicted RBP13.1□□□□□ -0.31
LGR5-203ENST00000540815 DNAJC25Q9H1X3 360 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 MAGEB6P1A0A0J9YX57 407 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 SPTLC2O15270 562 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
LGR5-203ENST00000540815 IARSP41252 1262 aaKnown RBP13.1□□□□□ -0.31
LGR5-203ENST00000540815 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
LGR5-203ENST00000540815 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 KRT40Q6A162 431 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 TRIM34Q9BYJ4 488 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 ANAPC4Q9UJX5 808 aa13.1□□□□□ -0.31
LGR5-203ENST00000540815 SMIM22K7EJ46 135 aa13.09□□□□□ -0.31
LGR5-203ENST00000540815 KLRK1P26718 216 aa13.09□□□□□ -0.31
LGR5-203ENST00000540815 PPARAQ07869 468 aa13.09□□□□□ -0.31
LGR5-203ENST00000540815 SART3Q15020 963 aaKnown RBP13.09□□□□□ -0.31
LGR5-203ENST00000540815 CCDC186Q7Z3E2 898 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms