RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MAGEB6Q8N7X4 407 aa20.23■□□□□ 0.83
UBC-208ENST00000540700 PRMT6Q96LA8 375 aaPredicted RBP20.23■□□□□ 0.83
UBC-208ENST00000540700 SERPINA10Q9UK55 444 aa20.23■□□□□ 0.83
UBC-208ENST00000540700 CENPFP49454 3210 aa20.23■□□□□ 0.83
UBC-208ENST00000540700 PDE6AP16499 860 aa20.22■□□□□ 0.83
UBC-208ENST00000540700 OTOP1Q7RTM1 612 aa20.22■□□□□ 0.83
UBC-208ENST00000540700 IFNL1Q8IU54 200 aa20.22■□□□□ 0.83
UBC-208ENST00000540700 MTMR14Q8NCE2 650 aa20.22■□□□□ 0.83
UBC-208ENST00000540700 SLC10A4Q96EP9 437 aa20.22■□□□□ 0.83
UBC-208ENST00000540700 MROH7-TTC4A0A0A0MT08 1334 aa20.22■□□□□ 0.83
UBC-208ENST00000540700 SPDYE2BA6NHP3 402 aa20.21■□□□□ 0.83
UBC-208ENST00000540700 MANSC4A6NHS7 340 aaPredicted RBP20.21■□□□□ 0.83
UBC-208ENST00000540700 SPDYE6P0CI01 402 aa20.21■□□□□ 0.83
UBC-208ENST00000540700 ADD2P35612 726 aa20.21■□□□□ 0.83
UBC-208ENST00000540700 HDLBPQ00341 1268 aaKnown RBP20.21■□□□□ 0.83
UBC-208ENST00000540700 NAA16Q6N069 864 aaPredicted RBP20.21■□□□□ 0.83
UBC-208ENST00000540700 ZDHHC15Q96MV8 337 aa20.21■□□□□ 0.83
UBC-208ENST00000540700 MRIQ9BWK5 157 aa20.21■□□□□ 0.83
UBC-208ENST00000540700 SDSP20132 328 aa20.2■□□□□ 0.82
UBC-208ENST00000540700 MAP3K12Q12852 859 aa20.2■□□□□ 0.82
UBC-208ENST00000540700 SLC9C2Q5TAH2 1124 aa20.2■□□□□ 0.82
UBC-208ENST00000540700 HHIPL2Q6UWX4 724 aa20.2■□□□□ 0.82
UBC-208ENST00000540700 TEKT1Q969V4 418 aa20.2■□□□□ 0.82
UBC-208ENST00000540700 FAM163AQ96GL9 167 aaPredicted RBP20.2■□□□□ 0.82
UBC-208ENST00000540700 CLMNQ96JQ2 1002 aa20.2■□□□□ 0.82
UBC-208ENST00000540700 KIAA0100Q14667 2235 aaKnown RBP20.2■□□□□ 0.82
UBC-208ENST00000540700 MAST3O60307 1309 aa20.2■□□□□ 0.82
UBC-208ENST00000540700 ZNF532Q9HCE3 1301 aa20.2■□□□□ 0.82
UBC-208ENST00000540700 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
UBC-208ENST00000540700 IGF2BP3O00425 579 aaKnown RBP eCLIP20.19■□□□□ 0.82
UBC-208ENST00000540700 CYP7A1P22680 504 aa20.19■□□□□ 0.82
UBC-208ENST00000540700 RBM5P52756 815 aaKnown RBP eCLIP20.19■□□□□ 0.82
UBC-208ENST00000540700 DLGAP5Q15398 846 aa20.19■□□□□ 0.82
UBC-208ENST00000540700 RILPL2Q969X0 211 aa20.19■□□□□ 0.82
UBC-208ENST00000540700 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
UBC-208ENST00000540700 FSD1Q9BTV5 496 aa20.19■□□□□ 0.82
UBC-208ENST00000540700 DEFB129Q9H1M3 183 aa20.19■□□□□ 0.82
UBC-208ENST00000540700 MYH2Q9UKX2 1941 aa20.18■□□□□ 0.82
UBC-208ENST00000540700 BTDP43251 543 aa20.18■□□□□ 0.82
UBC-208ENST00000540700 INHBEP58166 350 aa20.18■□□□□ 0.82
UBC-208ENST00000540700 DYNLL1P63167 89 aaKnown RBP20.18■□□□□ 0.82
UBC-208ENST00000540700 CD99L2Q8TCZ2 262 aa20.18■□□□□ 0.82
UBC-208ENST00000540700 WNK4Q96J92 1243 aa20.18■□□□□ 0.82
UBC-208ENST00000540700 TDRD3Q9H7E2 651 aaKnown RBP20.18■□□□□ 0.82
UBC-208ENST00000540700 GPR75-ASB3A0A0A6YYF3 556 aa20.17■□□□□ 0.82
UBC-208ENST00000540700 CLRN2A0PK11 232 aa20.17■□□□□ 0.82
UBC-208ENST00000540700 EN2P19622 333 aaPredicted RBP20.17■□□□□ 0.82
UBC-208ENST00000540700 MMP14P50281 582 aa20.17■□□□□ 0.82
UBC-208ENST00000540700 RHBDL3P58872 404 aa20.17■□□□□ 0.82
UBC-208ENST00000540700 MIGA1Q8NAN2 632 aa20.17■□□□□ 0.82
UBC-208ENST00000540700 ERO1AQ96HE7 468 aa20.17■□□□□ 0.82
UBC-208ENST00000540700 SEC62Q99442 399 aaKnown RBP20.17■□□□□ 0.82
UBC-208ENST00000540700 PTPN22Q9Y2R2 807 aa20.17■□□□□ 0.82
UBC-208ENST00000540700 RNF113AO15541 343 aaKnown RBP20.16■□□□□ 0.82
UBC-208ENST00000540700 CACNB3P54284 484 aa20.16■□□□□ 0.82
UBC-208ENST00000540700 GSTO1P78417 241 aa20.16■□□□□ 0.82
UBC-208ENST00000540700 CDC42EP5Q6NZY7 148 aa20.16■□□□□ 0.82
UBC-208ENST00000540700 OSBP2Q969R2 916 aa20.16■□□□□ 0.82
UBC-208ENST00000540700 RIOK1Q9BRS2 568 aaKnown RBP20.16■□□□□ 0.82
UBC-208ENST00000540700 PUS7LQ9H0K6 701 aaKnown RBP20.16■□□□□ 0.82
UBC-208ENST00000540700 AATFQ9NY61 560 aaKnown RBP eCLIP20.16■□□□□ 0.829e-7■■□□□ 13.5
UBC-208ENST00000540700 RFX7Q2KHR2 1363 aa20.16■□□□□ 0.82
UBC-208ENST00000540700 MYH7P12883 1935 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 BRCA2P51587 3418 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 M0R2C6 588 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 PPP1R12BO60237 982 aaPredicted RBP20.15■□□□□ 0.82
UBC-208ENST00000540700 IGSF3O75054 1194 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 ZBTB48P10074 688 aaPredicted RBP20.15■□□□□ 0.82
UBC-208ENST00000540700 CRHR2Q13324 411 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 UBE3CQ15386 1083 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 SPDYE2Q495Y8 402 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 EFCC1Q9HA90 598 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 ZNF70Q9UC06 446 aaPredicted RBP20.15■□□□□ 0.82
UBC-208ENST00000540700 CEP290O15078 2479 aa20.15■□□□□ 0.82
UBC-208ENST00000540700 PPP4CP60510 307 aa20.14■□□□□ 0.81
UBC-208ENST00000540700 NFIAQ12857 509 aa20.14■□□□□ 0.81
UBC-208ENST00000540700 BMP2KLQ5H9B9 411 aa20.14■□□□□ 0.81
UBC-208ENST00000540700 SH3RF3Q8TEJ3 882 aaPredicted RBP20.14■□□□□ 0.81
UBC-208ENST00000540700 FAM227BQ96M60 508 aa20.14■□□□□ 0.81
UBC-208ENST00000540700 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.14■□□□□ 0.81
UBC-208ENST00000540700 IL25Q9H293 177 aa20.14■□□□□ 0.81
UBC-208ENST00000540700 A0A0D9SFI3 127 aa20.13■□□□□ 0.81
UBC-208ENST00000540700 LDHCP07864 332 aa20.13■□□□□ 0.81
UBC-208ENST00000540700 FXR1P51114 621 aaKnown RBP eCLIP20.13■□□□□ 0.812e-7■■■□□ 15.6
UBC-208ENST00000540700 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
UBC-208ENST00000540700 ZMYM1Q5SVZ6 1142 aa20.13■□□□□ 0.81
UBC-208ENST00000540700 SLF2Q8IX21 1173 aa20.13■□□□□ 0.81
UBC-208ENST00000540700 LCORLQ8N3X6 602 aa20.13■□□□□ 0.81
UBC-208ENST00000540700 DDX4Q9NQI0 724 aaKnown RBP20.13■□□□□ 0.81
UBC-208ENST00000540700 USP40Q9NVE5 1235 aa20.13■□□□□ 0.81
UBC-208ENST00000540700 SSC5DA1L4H1 1573 aa20.12■□□□□ 0.81
UBC-208ENST00000540700 ECM29Q5VYK3 1845 aa20.12■□□□□ 0.81
UBC-208ENST00000540700 WDHD1O75717 1129 aaPredicted RBP20.12■□□□□ 0.81
UBC-208ENST00000540700 GJA5P36382 358 aa20.12■□□□□ 0.81
UBC-208ENST00000540700 NMIQ13287 307 aaPredicted RBP20.12■□□□□ 0.81
UBC-208ENST00000540700 OTUD7BQ6GQQ9 843 aa20.12■□□□□ 0.81
UBC-208ENST00000540700 CCDC129Q6ZRS4 1044 aa20.12■□□□□ 0.81
UBC-208ENST00000540700 APPBP2Q92624 585 aa20.12■□□□□ 0.81
UBC-208ENST00000540700 ARMC5Q96C12 935 aa20.12■□□□□ 0.81
UBC-208ENST00000540700 VEZTQ9HBM0 779 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms