RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ADD2P35612 726 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 TNFAIP1Q13829 316 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 DDX60LQ5H9U9 1706 aaKnown RBP12.75□□□□□ -0.37
ATL3-204ENST00000540699 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 MAGEB6Q8N7X4 407 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 ESYT1Q9BSJ8 1104 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 RPAP1Q9BWH6 1393 aaPredicted RBP12.75□□□□□ -0.37
ATL3-204ENST00000540699 PAPPA2Q9BXP8 1791 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 IDI2Q9BXS1 227 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.75□□□□□ -0.37
ATL3-204ENST00000540699 DEFB129Q9H1M3 183 aa12.75□□□□□ -0.37
ATL3-204ENST00000540699 UPF2Q9HAU5 1272 aaKnown RBP12.75□□□□□ -0.37
ATL3-204ENST00000540699 COL2A1P02458 1487 aaPredicted RBP12.74□□□□□ -0.37
ATL3-204ENST00000540699 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
ATL3-204ENST00000540699 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
ATL3-204ENST00000540699 UBE3CQ15386 1083 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 SLC9C2Q5TAH2 1124 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 DLK2Q6UY11 383 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 TEPSINQ96N21 525 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 VEZTQ9HBM0 779 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 USP40Q9NVE5 1235 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 FAM198AQ9UFP1 575 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 NAV1Q8NEY1 1877 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 SIPA1L1O43166 1804 aa12.74□□□□□ -0.37
ATL3-204ENST00000540699 SSC5DA1L4H1 1573 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 ZNF532Q9HCE3 1301 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 CA12O43570 354 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 BAG3O95817 575 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 ZFYP08048 801 aaPredicted RBP12.73□□□□□ -0.37
ATL3-204ENST00000540699 PLCG2P16885 1265 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 TNNI2P48788 182 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 CACNB3P54284 484 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 NFIAQ12857 509 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 RASA3Q14644 834 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 ZSCAN25Q6NSZ9 544 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
ATL3-204ENST00000540699 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 IL25Q9H293 177 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
ATL3-204ENST00000540699 SCAF8Q9UPN6 1271 aaKnown RBP12.73□□□□□ -0.37
ATL3-204ENST00000540699 OTOFQ9HC10 1997 aa12.72□□□□□ -0.37
ATL3-204ENST00000540699 TCP10L2B9ZVM9 353 aa12.72□□□□□ -0.37
ATL3-204ENST00000540699 SGSM2O43147 1006 aa12.72□□□□□ -0.37
ATL3-204ENST00000540699 ENTPD3O75355 529 aa12.72□□□□□ -0.37
ATL3-204ENST00000540699 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
ATL3-204ENST00000540699 HUNKP57058 714 aa12.72□□□□□ -0.37
ATL3-204ENST00000540699 SH3RF3Q8TEJ3 882 aaPredicted RBP12.72□□□□□ -0.37
ATL3-204ENST00000540699 FAM151AQ8WW52 585 aa12.72□□□□□ -0.37
ATL3-204ENST00000540699 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
ATL3-204ENST00000540699 USP26Q9BXU7 913 aa12.72□□□□□ -0.37
ATL3-204ENST00000540699 AATFQ9NY61 560 aaKnown RBP eCLIP12.72□□□□□ -0.37
ATL3-204ENST00000540699 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
ATL3-204ENST00000540699 ATRNL1Q5VV63 1379 aa12.71□□□□□ -0.37
ATL3-204ENST00000540699 HIP1O00291 1037 aa12.71□□□□□ -0.37
ATL3-204ENST00000540699 RNF113AO15541 343 aaKnown RBP12.71□□□□□ -0.37
ATL3-204ENST00000540699 EPB41L2O43491 1005 aaKnown RBP12.71□□□□□ -0.37
ATL3-204ENST00000540699 REC8O95072 547 aa12.71□□□□□ -0.37
ATL3-204ENST00000540699 CHGBP05060 677 aa12.71□□□□□ -0.37
ATL3-204ENST00000540699 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
ATL3-204ENST00000540699 NOGQ13253 232 aa12.71□□□□□ -0.37
ATL3-204ENST00000540699 LRRFIP1Q32MZ4 808 aaKnown RBP12.71□□□□□ -0.37
ATL3-204ENST00000540699 ZIC5Q96T25 663 aa12.71□□□□□ -0.37
ATL3-204ENST00000540699 FSD1Q9BTV5 496 aa12.71□□□□□ -0.37
ATL3-204ENST00000540699 GBA2Q9HCG7 927 aaPredicted RBP12.71□□□□□ -0.37
ATL3-204ENST00000540699 DDX4Q9NQI0 724 aaKnown RBP12.71□□□□□ -0.37
ATL3-204ENST00000540699 LAMB1P07942 1786 aa12.71□□□□□ -0.38
ATL3-204ENST00000540699 RAD50Q92878 1312 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 FAM155AB1AL88 458 aaPredicted RBP12.7□□□□□ -0.38
ATL3-204ENST00000540699 FKBP1BP68106 108 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 SLFNL1Q499Z3 407 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 PRAMEF18Q5VWM3 479 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 CDAN1Q8IWY9 1227 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 TEX11Q8IYF3 940 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 APPBP2Q92624 585 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
ATL3-204ENST00000540699 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
ATL3-204ENST00000540699 NMIQ13287 307 aaPredicted RBP12.69□□□□□ -0.38
ATL3-204ENST00000540699 MAP3K11Q16584 847 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 SUPT20HL1Q3ZLR7 823 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 NBPF12Q5TAG4 269 aaPredicted RBP12.69□□□□□ -0.38
ATL3-204ENST00000540699 RGMBQ6NW40 437 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 C2orf69Q8N8R5 385 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 KIF2CQ99661 725 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 MCOLN1Q9GZU1 580 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
ATL3-204ENST00000540699 FLT1P17948 1338 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 A0A0D9SFI3 127 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 NF2P35240 595 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 MAP3K10Q02779 954 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 TCP10Q12799 353 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 CWC27Q6UX04 472 aaKnown RBP12.68□□□□□ -0.38
ATL3-204ENST00000540699 LCORLQ8N3X6 602 aa12.68□□□□□ -0.38
ATL3-204ENST00000540699 RUFY2Q8WXA3 655 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms