RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 ZNF512BQ96KM6 892 aaPredicted RBP25.74■■□□□ 1.71
CHFR-217ENST00000540537 DDX4Q9NQI0 724 aaKnown RBP25.74■■□□□ 1.71
CHFR-217ENST00000540537 NPM3O75607 178 aaKnown RBP25.73■■□□□ 1.71
CHFR-217ENST00000540537 TAF1CQ15572 869 aaPredicted RBP25.73■■□□□ 1.71
CHFR-217ENST00000540537 FBXO46Q6PJ61 603 aaPredicted RBP25.73■■□□□ 1.71
CHFR-217ENST00000540537 ERO1AQ96HE7 468 aa25.73■■□□□ 1.71
CHFR-217ENST00000540537 ZCCHC17Q9NP64 241 aaKnown RBP25.73■■□□□ 1.71
CHFR-217ENST00000540537 LRP2BPQ9P2M1 347 aa25.73■■□□□ 1.71
CHFR-217ENST00000540537 PICALMQ13492 652 aa25.72■■□□□ 1.71
CHFR-217ENST00000540537 SH3BP5LQ7L8J4 393 aa25.72■■□□□ 1.71
CHFR-217ENST00000540537 ZSCAN29Q8IWY8 852 aaPredicted RBP25.72■■□□□ 1.71
CHFR-217ENST00000540537 FAM43AQ8N2R8 423 aa25.72■■□□□ 1.71
CHFR-217ENST00000540537 ZFYVE28Q9HCC9 887 aa25.72■■□□□ 1.71
CHFR-217ENST00000540537 MAST2Q6P0Q8 1798 aa25.72■■□□□ 1.71
CHFR-217ENST00000540537 IGSF3O75054 1194 aa25.71■■□□□ 1.71
CHFR-217ENST00000540537 MAP3K10Q02779 954 aa25.71■■□□□ 1.71
CHFR-217ENST00000540537 ERC1Q8IUD2 1116 aa25.71■■□□□ 1.71
CHFR-217ENST00000540537 SNRKQ9NRH2 765 aa25.71■■□□□ 1.71
CHFR-217ENST00000540537 DBNLQ9UJU6 430 aaKnown RBP25.71■■□□□ 1.71
CHFR-217ENST00000540537 RCAN3Q9UKA8 241 aa25.71■■□□□ 1.71
CHFR-217ENST00000540537 DDX19BQ9UMR2 479 aa25.71■■□□□ 1.71
CHFR-217ENST00000540537 DDTLA6NHG4 134 aaPredicted RBP25.7■■□□□ 1.7
CHFR-217ENST00000540537 SP3Q02447 781 aa25.7■■□□□ 1.7
CHFR-217ENST00000540537 EAF2Q96CJ1 260 aaPredicted RBP25.7■■□□□ 1.7
CHFR-217ENST00000540537 KCNH4Q9UQ05 1017 aa25.7■■□□□ 1.7
CHFR-217ENST00000540537 COL2A1P02458 1487 aaPredicted RBP25.69■■□□□ 1.7
CHFR-217ENST00000540537 PHF20L1A8MW92 1017 aa25.69■■□□□ 1.7
CHFR-217ENST00000540537 BTBD19C9JJ37 291 aa25.69■■□□□ 1.7
CHFR-217ENST00000540537 MLLT1Q03111 559 aaPredicted RBP25.69■■□□□ 1.7
CHFR-217ENST00000540537 OTOP1Q7RTM1 612 aa25.69■■□□□ 1.7
CHFR-217ENST00000540537 CD99L2Q8TCZ2 262 aa25.69■■□□□ 1.7
CHFR-217ENST00000540537 CCDC8Q9H0W5 538 aaPredicted RBP25.69■■□□□ 1.7
CHFR-217ENST00000540537 TLR7Q9NYK1 1049 aaKnown RBP25.69■■□□□ 1.7
CHFR-217ENST00000540537 EXOC6BQ9Y2D4 811 aa25.69■■□□□ 1.7
CHFR-217ENST00000540537 TRIM17Q9Y577 477 aa25.69■■□□□ 1.7
CHFR-217ENST00000540537 CYP2E1P05181 493 aaPredicted RBP25.68■■□□□ 1.7
CHFR-217ENST00000540537 HSP90AB4PQ58FF6 505 aa25.68■■□□□ 1.7
CHFR-217ENST00000540537 COG6Q9Y2V7 657 aa25.68■■□□□ 1.7
CHFR-217ENST00000540537 NAA16Q6N069 864 aaPredicted RBP25.67■■□□□ 1.7
CHFR-217ENST00000540537 RPAP2Q8IXW5 612 aaPredicted RBP25.67■■□□□ 1.7
CHFR-217ENST00000540537 SCYL3Q8IZE3 742 aa25.67■■□□□ 1.7
CHFR-217ENST00000540537 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.67■■□□□ 1.7
CHFR-217ENST00000540537 NOL10Q9BSC4 688 aaKnown RBP25.67■■□□□ 1.7
CHFR-217ENST00000540537 MYO5AQ9Y4I1 1855 aaKnown RBP25.66■■□□□ 1.7
CHFR-217ENST00000540537 ZAP70P43403 619 aa25.66■■□□□ 1.7
CHFR-217ENST00000540537 CHMP4BQ9H444 224 aaKnown RBP25.66■■□□□ 1.7
CHFR-217ENST00000540537 ZBTB40Q9NUA8 1239 aa25.66■■□□□ 1.7
CHFR-217ENST00000540537 CXCL11O14625 94 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 TBC1D12O60347 775 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 TLR2O60603 784 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 BAG3O95817 575 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 SOX10P56693 466 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 ANKRD23Q86SG2 305 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 TEX11Q8IYF3 940 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 OSBPL5Q9H0X9 879 aaPredicted RBP25.65■■□□□ 1.7
CHFR-217ENST00000540537 EFCC1Q9HA90 598 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 PICK1Q9NRD5 415 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 DOCK1Q14185 1865 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 HTTP42858 3142 aa25.65■■□□□ 1.7
CHFR-217ENST00000540537 CTNND1O60716 968 aaKnown RBP25.64■■□□□ 1.7
CHFR-217ENST00000540537 PLCG2P16885 1265 aa25.64■■□□□ 1.7
CHFR-217ENST00000540537 PPP4CP60510 307 aa25.64■■□□□ 1.7
CHFR-217ENST00000540537 AACSQ86V21 672 aa25.64■■□□□ 1.7
CHFR-217ENST00000540537 HMMRO75330 724 aa25.63■■□□□ 1.69
CHFR-217ENST00000540537 PTPRAP18433 802 aa25.63■■□□□ 1.69
CHFR-217ENST00000540537 RHPN1Q8TCX5 695 aa25.63■■□□□ 1.69
CHFR-217ENST00000540537 SH3RF3Q8TEJ3 882 aaPredicted RBP25.63■■□□□ 1.69
CHFR-217ENST00000540537 PIH1D3Q9NQM4 214 aaKnown RBP25.63■■□□□ 1.69
CHFR-217ENST00000540537 AATFQ9NY61 560 aaKnown RBP eCLIP25.63■■□□□ 1.69
CHFR-217ENST00000540537 MOGSQ13724 837 aa25.62■■□□□ 1.69
CHFR-217ENST00000540537 ARHGEF6Q15052 776 aa25.62■■□□□ 1.69
CHFR-217ENST00000540537 PTPN22Q9Y2R2 807 aa25.62■■□□□ 1.69
CHFR-217ENST00000540537 ZHX2Q9Y6X8 837 aa25.62■■□□□ 1.69
CHFR-217ENST00000540537 SLURP2P0DP57 97 aa25.61■■□□□ 1.69
CHFR-217ENST00000540537 ADGRA1Q86SQ6 560 aa25.61■■□□□ 1.69
CHFR-217ENST00000540537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.61■■□□□ 1.69
CHFR-217ENST00000540537 FOCADQ5VW36 1801 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 CDK5RAP2Q96SN8 1893 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 PDHXO00330 501 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 CAP1Q01518 475 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 PDE3AQ14432 1141 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 SIRT2Q8IXJ6 389 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 KIF1BPQ96EK5 621 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 IL1RAPL2Q9NP60 686 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 AFG3L2Q9Y4W6 797 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 PHIPQ8WWQ0 1821 aa25.6■■□□□ 1.69
CHFR-217ENST00000540537 PTPRFP10586 1907 aa25.59■■□□□ 1.69
CHFR-217ENST00000540537 A0A0G2JLL6 359 aaPredicted RBP25.59■■□□□ 1.69
CHFR-217ENST00000540537 PRRT2Q7Z6L0 340 aaPredicted RBP25.59■■□□□ 1.69
CHFR-217ENST00000540537 DHX36Q9H2U1 1008 aaKnown RBP25.59■■□□□ 1.69
CHFR-217ENST00000540537 TMED8Q6PL24 325 aaPredicted RBP25.58■■□□□ 1.69
CHFR-217ENST00000540537 FASTKD5Q7L8L6 764 aaKnown RBP25.58■■□□□ 1.69
CHFR-217ENST00000540537 CLASRPQ8N2M8 674 aaKnown RBP25.58■■□□□ 1.69
CHFR-217ENST00000540537 HERC5Q9UII4 1024 aaKnown RBP25.58■■□□□ 1.69
CHFR-217ENST00000540537 FAM196BA6NMK8 535 aa25.57■■□□□ 1.68
CHFR-217ENST00000540537 RAB11FIP3O75154 756 aa25.57■■□□□ 1.68
CHFR-217ENST00000540537 IDH1O75874 414 aaKnown RBP25.57■■□□□ 1.68
CHFR-217ENST00000540537 GPAT2Q6NUI2 795 aa25.57■■□□□ 1.68
CHFR-217ENST00000540537 C17orf99Q6UX52 265 aa25.57■■□□□ 1.68
CHFR-217ENST00000540537 CERS3Q8IU89 383 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms