RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TDRD3Q9H7E2 651 aaKnown RBP12.18□□□□□ -0.46
CLPB-210ENST00000539148 ZNF70Q9UC06 446 aaPredicted RBP12.18□□□□□ -0.46
CLPB-210ENST00000539148 COL2A1P02458 1487 aaPredicted RBP12.18□□□□□ -0.46
CLPB-210ENST00000539148 LAMA4Q16363 1823 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 ADAMTSL1Q8N6G6 1762 aa12.18□□□□□ -0.46
CLPB-210ENST00000539148 ZNF213O14771 459 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 POLR3DP05423 398 aaPredicted RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 NF2P35240 595 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 RHBDL3P58872 404 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 DYNLL1P63167 89 aaKnown RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 KRT32Q14532 448 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 SAMD7Q7Z3H4 446 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 ADGRA1Q86SQ6 560 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 ZSCAN29Q8IWY8 852 aaPredicted RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 IFNL3Q8IZI9 196 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 TGFBRAP1Q8WUH2 860 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 MAP4K1Q92918 833 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 ZBED3Q96IU2 234 aaPredicted RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 SEC62Q99442 399 aaKnown RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 RNF41Q9H4P4 317 aaPredicted RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 TAF1DQ9H5J8 278 aaPredicted RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 VEZTQ9HBM0 779 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 GPBP1L1Q9HC44 474 aaPredicted RBP12.17□□□□□ -0.46
CLPB-210ENST00000539148 MCM9Q9NXL9 1143 aa12.17□□□□□ -0.46
CLPB-210ENST00000539148 TRDNQ13061 729 aa12.16□□□□□ -0.46
CLPB-210ENST00000539148 SUPT20HL1Q3ZLR7 823 aa12.16□□□□□ -0.46
CLPB-210ENST00000539148 SBK1Q52WX2 424 aa12.16□□□□□ -0.46
CLPB-210ENST00000539148 DCP1AQ9NPI6 582 aaPredicted RBP12.16□□□□□ -0.46
CLPB-210ENST00000539148 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
CLPB-210ENST00000539148 FLT1P17948 1338 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 GSG1L2A8MUP6 293 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 PDE4BQ07343 736 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 PICALMQ13492 652 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 NBPF9Q3BBW0 867 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 EAPPQ56P03 285 aaPredicted RBP12.15□□□□□ -0.46
CLPB-210ENST00000539148 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 ZNF589Q86UQ0 364 aaPredicted RBP12.15□□□□□ -0.46
CLPB-210ENST00000539148 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 FOXP4Q8IVH2 680 aaPredicted RBP12.15□□□□□ -0.46
CLPB-210ENST00000539148 OSBPL5Q9H0X9 879 aaPredicted RBP12.15□□□□□ -0.46
CLPB-210ENST00000539148 CNNM2Q9H8M5 875 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 RRAGCQ9HB90 399 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 PI4KBQ9UBF8 816 aa12.15□□□□□ -0.46
CLPB-210ENST00000539148 CLRN2A0PK11 232 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 TCP10L2B9ZVM9 353 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 WDHD1O75717 1129 aaPredicted RBP12.14□□□□□ -0.47
CLPB-210ENST00000539148 FGAP02671 866 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 HMGB1P09429 215 aaKnown RBP12.14□□□□□ -0.47
CLPB-210ENST00000539148 PSMA5P28066 241 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 ANAPC15P60006 121 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 ANGEL2Q5VTE6 544 aaKnown RBP12.14□□□□□ -0.47
CLPB-210ENST00000539148 MAPKAPK5Q8IW41 473 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 CRACR2BQ8N4Y2 399 aaPredicted RBP12.14□□□□□ -0.47
CLPB-210ENST00000539148 SDR42E1Q8WUS8 393 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 TBC1D32Q96NH3 1257 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 LSG1Q9H089 658 aaKnown RBP12.14□□□□□ -0.47
CLPB-210ENST00000539148 GGA3Q9NZ52 723 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 HERC5Q9UII4 1024 aaKnown RBP12.14□□□□□ -0.47
CLPB-210ENST00000539148 RBM8AQ9Y5S9 174 aaKnown RBP12.14□□□□□ -0.47
CLPB-210ENST00000539148 ATRNL1Q5VV63 1379 aa12.14□□□□□ -0.47
CLPB-210ENST00000539148 MINDY4BA8MYZ0 360 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 USP17L12C9JPN9 530 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 USP17L21D6R901 530 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
CLPB-210ENST00000539148 TRPM4Q8TD43 1214 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 KRT23Q9C075 422 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 DEFB129Q9H1M3 183 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 EHD4Q9H223 541 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 PGAP2Q9UHJ9 254 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 SERPINB13Q9UIV8 391 aa12.13□□□□□ -0.47
CLPB-210ENST00000539148 DDX60LQ5H9U9 1706 aaKnown RBP12.12□□□□□ -0.47
CLPB-210ENST00000539148 PRKAB2O43741 272 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 CHGBP05060 677 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 HSPA4P34932 840 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 PPARAQ07869 468 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 TCP10Q12799 353 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 RASA3Q14644 834 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 C12orf60Q5U649 245 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 MFSD6Q6ZSS7 791 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 KRT26Q7Z3Y9 468 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 CSRNP1Q96S65 589 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 ANAPC4Q9UJX5 808 aa12.12□□□□□ -0.47
CLPB-210ENST00000539148 SHTN1A0MZ66 631 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 PPP1R12BO60237 982 aaPredicted RBP12.11□□□□□ -0.47
CLPB-210ENST00000539148 TBC1D12O60347 775 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 PTH1RQ03431 593 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 SART3Q15020 963 aaKnown RBP12.11□□□□□ -0.47
CLPB-210ENST00000539148 NECTIN1Q15223 517 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 VPS53Q5VIR6 699 aa12.11□□□□□ -0.47
CLPB-210ENST00000539148 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms