RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 WWC3Q9ULE0 1092 aa8.43□□□□□ -1.06
SSPN-206ENST00000539019 TMPRSS2O15393 492 aa8.42□□□□□ -1.06
SSPN-206ENST00000539019 PDZD3Q86UT5 571 aa8.42□□□□□ -1.06
SSPN-206ENST00000539019 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
SSPN-206ENST00000539019 CLASP1Q7Z460 1538 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 SLFN14P0C7P3 912 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 SEZ6L2Q6UXD5 910 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 C3orf58Q8NDZ4 430 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 KCNB2Q92953 911 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 PSMG3-AS1Q96PY0 264 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 KRTAP4-8Q9BYQ9 185 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 OSBPL7Q9BZF2 842 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 CRIM1Q9NZV1 1036 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 PBRM1Q86U86 1689 aa8.41□□□□□ -1.06
SSPN-206ENST00000539019 EEA1Q15075 1411 aa8.4□□□□□ -1.06
SSPN-206ENST00000539019 FAM170BA6NMN3 283 aa8.4□□□□□ -1.06
SSPN-206ENST00000539019 DYNC1LI2O43237 492 aaPredicted RBP8.4□□□□□ -1.06
SSPN-206ENST00000539019 FOSL1P15407 271 aa8.4□□□□□ -1.06
SSPN-206ENST00000539019 SULF2Q8IWU5 870 aa8.4□□□□□ -1.06
SSPN-206ENST00000539019 FBF1Q8TES7 1133 aa8.4□□□□□ -1.06
SSPN-206ENST00000539019 C1GALT1Q9NS00 363 aa8.4□□□□□ -1.06
SSPN-206ENST00000539019 KRT82Q9NSB4 513 aa8.4□□□□□ -1.06
SSPN-206ENST00000539019 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
SSPN-206ENST00000539019 CEP170Q5SW79 1584 aa8.39□□□□□ -1.07
SSPN-206ENST00000539019 ARNTP27540 789 aa8.39□□□□□ -1.07
SSPN-206ENST00000539019 GP2P55259 537 aaKnown RBP8.39□□□□□ -1.07
SSPN-206ENST00000539019 ID3Q02535 119 aa8.39□□□□□ -1.07
SSPN-206ENST00000539019 KIF4BQ2VIQ3 1234 aa8.39□□□□□ -1.07
SSPN-206ENST00000539019 ALG1LQ6GMV1 187 aa8.39□□□□□ -1.07
SSPN-206ENST00000539019 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
SSPN-206ENST00000539019 METTL22Q9BUU2 404 aaPredicted RBP8.39□□□□□ -1.07
SSPN-206ENST00000539019 PCDHGC5Q9Y5F6 944 aa8.39□□□□□ -1.07
SSPN-206ENST00000539019 RAPGEF2Q9Y4G8 1499 aa8.38□□□□□ -1.07
SSPN-206ENST00000539019 WNT11O96014 354 aa8.38□□□□□ -1.07
SSPN-206ENST00000539019 CPSF6Q16630 551 aaKnown RBP eCLIP8.38□□□□□ -1.07
SSPN-206ENST00000539019 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
SSPN-206ENST00000539019 DISC1Q9NRI5 854 aa8.38□□□□□ -1.07
SSPN-206ENST00000539019 OAS3Q9Y6K5 1087 aaKnown RBP8.38□□□□□ -1.07
SSPN-206ENST00000539019 CYP26A1O43174 497 aa8.37□□□□□ -1.07
SSPN-206ENST00000539019 NME2P22392 152 aa8.37□□□□□ -1.07
SSPN-206ENST00000539019 GSTT1P30711 240 aa8.37□□□□□ -1.07
SSPN-206ENST00000539019 MSMPQ1L6U9 139 aa8.37□□□□□ -1.07
SSPN-206ENST00000539019 DUSP27Q5VZP5 1158 aa8.37□□□□□ -1.07
SSPN-206ENST00000539019 TPTE2Q6XPS3 522 aa8.37□□□□□ -1.07
SSPN-206ENST00000539019 SRCIN1Q9C0H9 1055 aa8.37□□□□□ -1.07
SSPN-206ENST00000539019 ATXN3LQ9H3M9 355 aa8.37□□□□□ -1.07
SSPN-206ENST00000539019 P4HBP07237 508 aaKnown RBP8.36□□□□□ -1.07
SSPN-206ENST00000539019 ZNF765Q7L2R6 523 aa8.36□□□□□ -1.07
SSPN-206ENST00000539019 EMILIN2Q9BXX0 1053 aa8.36□□□□□ -1.07
SSPN-206ENST00000539019 KIAA0586Q9BVV6 1533 aa8.36□□□□□ -1.07
SSPN-206ENST00000539019 CUL7Q14999 1698 aa8.36□□□□□ -1.07
SSPN-206ENST00000539019 PATL2C9JE40 543 aaKnown RBP8.35□□□□□ -1.07
SSPN-206ENST00000539019 CHD1O14646 1710 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 GIPC1O14908 333 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 BMP6P22004 513 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 ATP2B2Q01814 1243 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 MAP1SQ66K74 1059 aaPredicted RBP8.35□□□□□ -1.07
SSPN-206ENST00000539019 MPRIPQ6WCQ1 1025 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 CBX8Q9HC52 389 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 HNRNPUQ00839 825 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSPN-206ENST00000539019 CYP27A1Q02318 531 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 TTLL4Q14679 1199 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 OGFOD3Q6PK18 319 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 SMYD4Q8IYR2 804 aaPredicted RBP8.35□□□□□ -1.07
SSPN-206ENST00000539019 GRIN3AQ8TCU5 1115 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 LRRC4CQ9HCJ2 640 aa8.35□□□□□ -1.07
SSPN-206ENST00000539019 ENC1O14682 589 aa8.34□□□□□ -1.07
SSPN-206ENST00000539019 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
SSPN-206ENST00000539019 FBXO24O75426 580 aa8.34□□□□□ -1.07
SSPN-206ENST00000539019 PAGE1O75459 146 aa8.34□□□□□ -1.07
SSPN-206ENST00000539019 HCLS1P14317 486 aaPredicted RBP8.34□□□□□ -1.07
SSPN-206ENST00000539019 ZC3H12AQ5D1E8 599 aaKnown RBP8.34□□□□□ -1.07
SSPN-206ENST00000539019 GPBAR1Q8TDU6 330 aa8.34□□□□□ -1.07
SSPN-206ENST00000539019 CEP44Q9C0F1 390 aa8.34□□□□□ -1.07
SSPN-206ENST00000539019 PPM1HQ9ULR3 514 aa8.34□□□□□ -1.07
SSPN-206ENST00000539019 SPG7Q9UQ90 795 aa8.34□□□□□ -1.07
SSPN-206ENST00000539019 SHROOM2Q13796 1616 aa8.33□□□□□ -1.08
SSPN-206ENST00000539019 LDHBP07195 334 aaKnown RBP8.33□□□□□ -1.08
SSPN-206ENST00000539019 CDK5R2Q13319 367 aa8.33□□□□□ -1.08
SSPN-206ENST00000539019 FAM9AQ8IZU1 332 aaPredicted RBP8.33□□□□□ -1.08
SSPN-206ENST00000539019 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
SSPN-206ENST00000539019 CACNA2D2Q9NY47 1150 aa8.33□□□□□ -1.08
SSPN-206ENST00000539019 CCDC39Q9UFE4 941 aa8.33□□□□□ -1.08
SSPN-206ENST00000539019 ZC3H7BQ9UGR2 993 aaKnown RBP8.33□□□□□ -1.08
SSPN-206ENST00000539019 ERCC6L2Q5T890 1561 aa8.32□□□□□ -1.08
SSPN-206ENST00000539019 COL17A1Q9UMD9 1497 aaPredicted RBP8.32□□□□□ -1.08
SSPN-206ENST00000539019 IRAK1P51617 712 aa8.32□□□□□ -1.08
SSPN-206ENST00000539019 MCTP1Q6DN14 999 aa8.32□□□□□ -1.08
SSPN-206ENST00000539019 AEBP1Q8IUX7 1158 aa8.32□□□□□ -1.08
SSPN-206ENST00000539019 PCOLCE2Q9UKZ9 415 aa8.32□□□□□ -1.08
SSPN-206ENST00000539019 SAMM50Q9Y512 469 aa8.32□□□□□ -1.08
SSPN-206ENST00000539019 KIF21BO75037 1637 aa8.31□□□□□ -1.08
SSPN-206ENST00000539019 PRNPP04156 253 aa8.31□□□□□ -1.08
SSPN-206ENST00000539019 NEFMP07197 916 aa8.31□□□□□ -1.08
SSPN-206ENST00000539019 USP17L7P0C7H9 530 aa8.31□□□□□ -1.08
SSPN-206ENST00000539019 ANKRD24Q8TF21 1146 aa8.31□□□□□ -1.08
SSPN-206ENST00000539019 ACSBG1Q96GR2 724 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms