RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FAM163AQ96GL9 167 aaPredicted RBP16.84■□□□□ 0.29
CD4-208ENST00000538827 PCDHAC2Q9Y5I4 1007 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
CD4-208ENST00000538827 RASSF10A6NK89 507 aa16.83■□□□□ 0.28
CD4-208ENST00000538827 USP17L8P0C7I0 530 aa16.83■□□□□ 0.28
CD4-208ENST00000538827 PPP4CP60510 307 aa16.83■□□□□ 0.28
CD4-208ENST00000538827 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
CD4-208ENST00000538827 NECTIN1Q15223 517 aa16.83■□□□□ 0.28
CD4-208ENST00000538827 MAPKAPK5Q8IW41 473 aa16.83■□□□□ 0.28
CD4-208ENST00000538827 GMLQ99445 158 aa16.83■□□□□ 0.28
CD4-208ENST00000538827 USP40Q9NVE5 1235 aa16.83■□□□□ 0.28
CD4-208ENST00000538827 SERPINA10Q9UK55 444 aa16.83■□□□□ 0.28
CD4-208ENST00000538827 ZMYM6O95789 1325 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 ITGBL1O95965 494 aaPredicted RBP16.82■□□□□ 0.28
CD4-208ENST00000538827 FGAP02671 866 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 CYP21A2P08686 494 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
CD4-208ENST00000538827 RHBDL3P58872 404 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 ANAPC15P60006 121 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 PICALMQ13492 652 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 SLC4A8Q2Y0W8 1093 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 TGFBRAP1Q8WUH2 860 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 ZDHHC15Q96MV8 337 aa16.82■□□□□ 0.28
CD4-208ENST00000538827 JAKMIP1Q96N16 626 aaKnown RBP16.82■□□□□ 0.28
CD4-208ENST00000538827 SHTN1A0MZ66 631 aa16.81■□□□□ 0.28
CD4-208ENST00000538827 ZNF213O14771 459 aa16.81■□□□□ 0.28
CD4-208ENST00000538827 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
CD4-208ENST00000538827 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
CD4-208ENST00000538827 ALX1Q15699 326 aa16.81■□□□□ 0.28
CD4-208ENST00000538827 CDC42EP5Q6NZY7 148 aa16.81■□□□□ 0.28
CD4-208ENST00000538827 SAP30BPQ9UHR5 308 aaKnown RBP16.81■□□□□ 0.28
CD4-208ENST00000538827 TAF6LQ9Y6J9 622 aa16.81■□□□□ 0.28
CD4-208ENST00000538827 FLT1P17948 1338 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 WDR33Q9C0J8 1336 aaKnown RBP16.8■□□□□ 0.28
CD4-208ENST00000538827 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 RABEP1Q15276 862 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 MICALL2Q8IY33 904 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 AMOTL1Q8IY63 956 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 STK11IPQ8N1F8 1099 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 L3MBTL3Q96JM7 780 aaPredicted RBP16.8■□□□□ 0.28
CD4-208ENST00000538827 BEGAINQ9BUH8 593 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
CD4-208ENST00000538827 ATP8A2Q9NTI2 1148 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 TMOD2Q9NZR1 351 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 ARPP21Q9UBL0 812 aaPredicted RBP16.8■□□□□ 0.28
CD4-208ENST00000538827 MYH8P13535 1937 aa16.8■□□□□ 0.28
CD4-208ENST00000538827 CACNB3P54284 484 aa16.79■□□□□ 0.28
CD4-208ENST00000538827 CTDSPL2Q05D32 466 aa16.79■□□□□ 0.28
CD4-208ENST00000538827 PPARAQ07869 468 aa16.79■□□□□ 0.28
CD4-208ENST00000538827 KRT32Q14532 448 aa16.79■□□□□ 0.28
CD4-208ENST00000538827 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
CD4-208ENST00000538827 TBC1D10CQ8IV04 446 aa16.79■□□□□ 0.28
CD4-208ENST00000538827 KIF2CQ99661 725 aa16.79■□□□□ 0.28
CD4-208ENST00000538827 TAF1DQ9H5J8 278 aaPredicted RBP16.79■□□□□ 0.28
CD4-208ENST00000538827 TDRD3Q9H7E2 651 aaKnown RBP16.79■□□□□ 0.28
CD4-208ENST00000538827 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
CD4-208ENST00000538827 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 CLRN2A0PK11 232 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 CYP2D6P10635 497 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 CASTP20810 708 aaKnown RBP16.78■□□□□ 0.28
CD4-208ENST00000538827 ADCK5Q3MIX3 580 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 RBM26Q5T8P6 1007 aaKnown RBP16.78■□□□□ 0.28
CD4-208ENST00000538827 GIMAP6Q6P9H5 292 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 GPC2Q8N158 579 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 KCNB2Q92953 911 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 MRIQ9BWK5 157 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 UPF3BQ9BZI7 483 aaKnown RBP16.78■□□□□ 0.28
CD4-208ENST00000538827 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 PDE4DIPQ5VU43 2346 aa16.78■□□□□ 0.28
CD4-208ENST00000538827 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 USP17L21D6R901 530 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 E7EWF7 191 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 POLR3DP05423 398 aaPredicted RBP16.77■□□□□ 0.28
CD4-208ENST00000538827 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
CD4-208ENST00000538827 KIF4BQ2VIQ3 1234 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 CTR9Q6PD62 1173 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 STOX1Q6ZVD7 989 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 DPF2Q92785 391 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 VEZTQ9HBM0 779 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 DDX4Q9NQI0 724 aaKnown RBP16.77■□□□□ 0.28
CD4-208ENST00000538827 TOMM22Q9NS69 142 aa16.77■□□□□ 0.28
CD4-208ENST00000538827 CNOT7Q9UIV1 285 aaKnown RBP16.77■□□□□ 0.28
CD4-208ENST00000538827 H7C1D1 291 aa16.76■□□□□ 0.27
CD4-208ENST00000538827 MYO1BO43795 1136 aa16.76■□□□□ 0.27
CD4-208ENST00000538827 WDHD1O75717 1129 aaPredicted RBP16.76■□□□□ 0.27
CD4-208ENST00000538827 CPA1P15085 419 aa16.76■□□□□ 0.27
CD4-208ENST00000538827 PSMA5P28066 241 aa16.76■□□□□ 0.27
CD4-208ENST00000538827 TBC1D10BQ4KMP7 808 aaPredicted RBP16.76■□□□□ 0.27
CD4-208ENST00000538827 BLOC1S2Q6QNY1 142 aa16.76■□□□□ 0.27
CD4-208ENST00000538827 RALYLQ86SE5 291 aaKnown RBP16.76■□□□□ 0.27
CD4-208ENST00000538827 PRMT6Q96LA8 375 aaPredicted RBP16.76■□□□□ 0.27
CD4-208ENST00000538827 NBPF3Q9H094 633 aa16.76■□□□□ 0.27
CD4-208ENST00000538827 SCN4AP35499 1836 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 NEDD4P46934 1319 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 NEK4P51957 841 aa16.75■□□□□ 0.27
CD4-208ENST00000538827 ZNF280AP59817 542 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms