RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 NAA15Q9BXJ9 866 aaKnown RBP21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 DACH1Q9UI36 760 aa21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 AKR1B15C9JRZ8 316 aaPredicted RBP21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 CASP8Q14790 479 aa21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 PACS2Q86VP3 889 aa21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 NUTM2AQ8IVF1 878 aaPredicted RBP21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 MB21D2Q8IYB1 491 aaPredicted RBP21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 AKAP2Q9Y2D5 859 aa21.23■□□□□ 0.99
SFSWAP-207ENST00000538548 SOWAHDA6NJG2 315 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 IMMTQ16891 758 aaKnown RBP21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 MLKLQ8NB16 471 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 PPM1EQ8WY54 764 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 CLIC6Q96NY7 704 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 MED4Q9NPJ6 270 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 GEMIN8Q9NWZ8 242 aaKnown RBP21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 RGPD2P0DJD1 1756 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 TMEM94Q12767 1356 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 SIPA1L3O60292 1781 aaPredicted RBP21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 CORO7P57737 925 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 NR1I3Q14994 352 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 COPS6Q7L5N1 327 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 UBE3BQ7Z3V4 1068 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 NEUROD6Q96NK8 337 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 ACBD3Q9H3P7 528 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 SUGCTQ9HAC7 445 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 JRKLQ9Y4A0 524 aa21.22■□□□□ 0.99
SFSWAP-207ENST00000538548 NFAT5O94916 1531 aa21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 M0R2C6 588 aa21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 MYL6BP14649 208 aa21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 MDM2Q00987 491 aaPredicted RBP21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 FMR1Q06787 632 aaKnown RBP eCLIP21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 LRRC59Q96AG4 307 aaKnown RBP21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 CCDC102AQ96A19 550 aa21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 MAN1B1Q9UKM7 699 aa21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 MAP3K15Q6ZN16 1313 aa21.21■□□□□ 0.99
SFSWAP-207ENST00000538548 VSNL1P62760 191 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 KIF4BQ2VIQ3 1234 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 RAB11FIP4Q86YS3 637 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 ALG1Q9BT22 464 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 A0A1B0GTH6 734 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 CTAGE9A4FU28 777 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 NT5DC1Q5TFE4 455 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 LRRC31Q6UY01 552 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 RAD9BQ6WBX8 426 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 GPR108Q9NPR9 543 aa21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 DDX60Q8IY21 1712 aaKnown RBP21.2■□□□□ 0.98
SFSWAP-207ENST00000538548 ANTXR2P58335 489 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 HAND2P61296 217 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 KRT40Q6A162 431 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 WWC2Q6AWC2 1192 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 ANKRD13DQ6ZTN6 518 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 WDR19Q8NEZ3 1342 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 C4AP0C0L4 1744 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 C4BP0C0L5 1744 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 FOXN1O15353 648 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 GUCY2CP25092 1073 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 ZNF569Q5MCW4 686 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 NCOA7Q8NI08 942 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 NWD2Q9ULI1 1742 aa21.19■□□□□ 0.98
SFSWAP-207ENST00000538548 SPEF2Q9C093 1822 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 RHOXF2BP0C7M4 288 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 POSTNQ15063 836 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 WHAMMP3Q1A5X7 153 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 RASGRP2Q7LDG7 609 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 OSBP2Q969R2 916 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 RHOXF2Q9BQY4 288 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 TEX13AQ9BXU3 409 aaPredicted RBP21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 CTAGE15A4D2H0 777 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 CTAGE8P0CG41 777 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 TTC39AQ5SRH9 613 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 RALYLQ86SE5 291 aaKnown RBP21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 CTAGE6Q86UF2 777 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 CTAGE4Q8IX94 777 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 CABLES1Q8TDN4 633 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 AIFM3Q96NN9 605 aa21.18■□□□□ 0.98
SFSWAP-207ENST00000538548 CDKL5O76039 1030 aa21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 IFIT1P09914 478 aaKnown RBP21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 TRIML1Q8N9V2 468 aa21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 ZMYM6O95789 1325 aa21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 ATF3P18847 181 aa21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 MORC3Q14149 939 aa21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 PPFIBP1Q86W92 1011 aa21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 TRMT44Q8IYL2 757 aaKnown RBP21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 KRI1Q8N9T8 703 aaKnown RBP21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 ZBTB9Q96C00 473 aa21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 FAM204AQ9H8W3 233 aa21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 SAMSN1Q9NSI8 373 aaKnown RBP21.17■□□□□ 0.98
SFSWAP-207ENST00000538548 CPDO75976 1380 aa21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 FOXP2O15409 715 aa21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 PPFIA4O75335 1185 aa21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 SARSP49591 514 aaKnown RBP21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 TIMM10P62072 90 aa21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 ATG9AQ7Z3C6 839 aa21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 PHACTR2O75167 634 aa21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 ZC3H6P61129 1189 aaKnown RBP21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 KRT28Q7Z3Y7 464 aa21.16■□□□□ 0.98
SFSWAP-207ENST00000538548 VIPAS39Q9H9C1 493 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms