RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 APOBEC3HQ6NTF7 200 aaKnown RBP23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 RSBN1LQ6PCB5 846 aaPredicted RBP23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 Q6ZUG5 572 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 RALYLQ86SE5 291 aaKnown RBP23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 TEX11Q8IYF3 940 aa23.09■■□□□ 1.29
EFCAB11-202ENST00000538485 HSP90AA1P07900 732 aaKnown RBP23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 HDLBPQ00341 1268 aaKnown RBP23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 EVX2Q03828 476 aa23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 CXCL9Q07325 125 aa23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 STK11IPQ8N1F8 1099 aa23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 STAG1Q8WVM7 1258 aa23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 FOXD4L1Q9NU39 408 aa23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 MCM9Q9NXL9 1143 aa23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 PCDHAC2Q9Y5I4 1007 aa23.08■■□□□ 1.29
EFCAB11-202ENST00000538485 USP17L8P0C7I0 530 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 MFSD6Q6ZSS7 791 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 MAPKAPK5Q8IW41 473 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 ZDHHC15Q96MV8 337 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 ARPP21Q9UBL0 812 aaPredicted RBP23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 B4E1Z4 1266 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 ANKRD1Q15327 319 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 SBK1Q52WX2 424 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 GMLQ99445 158 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 SERPINA10Q9UK55 444 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 TPCN1Q9ULQ1 816 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 ZBTB12Q9Y330 459 aaPredicted RBP23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 MYO3BQ8WXR4 1341 aa23.07■■□□□ 1.28
EFCAB11-202ENST00000538485 LARGE1O95461 756 aa23.06■■□□□ 1.28
EFCAB11-202ENST00000538485 MCM5P33992 734 aa23.06■■□□□ 1.28
EFCAB11-202ENST00000538485 ANTXR2P58335 489 aa23.06■■□□□ 1.28
EFCAB11-202ENST00000538485 FLT1P17948 1338 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 CYP2D6P10635 497 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 SLC4A8Q2Y0W8 1093 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 CDC42EP5Q6NZY7 148 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 AGXT2Q9BYV1 514 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 NAV1Q8NEY1 1877 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 FOCADQ5VW36 1801 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 RBM5P52756 815 aaKnown RBP eCLIP23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 CUL4AQ13619 759 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 CYB5R4Q7L1T6 521 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 BRF1Q92994 677 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 RNF41Q9H4P4 317 aaPredicted RBP23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 CNNM2Q9H8M5 875 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 USP40Q9NVE5 1235 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 LAMB1P07942 1786 aa23.05■■□□□ 1.28
EFCAB11-202ENST00000538485 PRC1O43663 620 aa23.04■■□□□ 1.28
EFCAB11-202ENST00000538485 FGD1P98174 961 aa23.04■■□□□ 1.28
EFCAB11-202ENST00000538485 ME3Q16798 604 aa23.04■■□□□ 1.28
EFCAB11-202ENST00000538485 C12orf60Q5U649 245 aa23.04■■□□□ 1.28
EFCAB11-202ENST00000538485 WDHD1O75717 1129 aaPredicted RBP23.03■■□□□ 1.28
EFCAB11-202ENST00000538485 CIAPIN1Q6FI81 312 aa23.03■■□□□ 1.28
EFCAB11-202ENST00000538485 FBXL16Q8N461 479 aa23.03■■□□□ 1.28
EFCAB11-202ENST00000538485 KRT23Q9C075 422 aa23.03■■□□□ 1.28
EFCAB11-202ENST00000538485 ZSWIM5Q9P217 1185 aa23.03■■□□□ 1.28
EFCAB11-202ENST00000538485 KDM4AO75164 1064 aa23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 FGRP09769 529 aa23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 RRP12Q5JTH9 1297 aaKnown RBP23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 ARHGAP27Q6ZUM4 889 aa23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 GPHNQ9NQX3 736 aaPredicted RBP23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 TOMM22Q9NS69 142 aa23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 SAP30BPQ9UHR5 308 aaKnown RBP23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 WDR19Q8NEZ3 1342 aa23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 DDX60LQ5H9U9 1706 aaKnown RBP23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 AGBL3Q8NEM8 1001 aa23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 ZSCAN31Q96LW9 406 aaPredicted RBP23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 DDX4Q9NQI0 724 aaKnown RBP23.02■■□□□ 1.28
EFCAB11-202ENST00000538485 ECM29Q5VYK3 1845 aa23.01■■□□□ 1.27
EFCAB11-202ENST00000538485 DDIT3P35638 169 aa23.01■■□□□ 1.27
EFCAB11-202ENST00000538485 PLCD1P51178 756 aa23.01■■□□□ 1.27
EFCAB11-202ENST00000538485 PICALMQ13492 652 aa23.01■■□□□ 1.27
EFCAB11-202ENST00000538485 CFAP100Q494V2 611 aa23.01■■□□□ 1.27
EFCAB11-202ENST00000538485 SH2B1Q9NRF2 756 aaPredicted RBP23.01■■□□□ 1.27
EFCAB11-202ENST00000538485 FZD9O00144 591 aa23■■□□□ 1.27
EFCAB11-202ENST00000538485 PRDM1O75626 825 aa23■■□□□ 1.27
EFCAB11-202ENST00000538485 MYH1P12882 1939 aa23■■□□□ 1.27
EFCAB11-202ENST00000538485 POLR3DP05423 398 aaPredicted RBP23■■□□□ 1.27
EFCAB11-202ENST00000538485 PCP11498 1178 aaKnown RBP23■■□□□ 1.27
EFCAB11-202ENST00000538485 NFIAQ12857 509 aa23■■□□□ 1.27
EFCAB11-202ENST00000538485 AMOTL1Q8IY63 956 aa23■■□□□ 1.27
EFCAB11-202ENST00000538485 OGFOD1Q8N543 542 aa23■■□□□ 1.27
EFCAB11-202ENST00000538485 PRMT6Q96LA8 375 aaPredicted RBP23■■□□□ 1.27
EFCAB11-202ENST00000538485 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23■■□□□ 1.27
EFCAB11-202ENST00000538485 APOBRQ0VD83 1088 aa22.99■■□□□ 1.27
EFCAB11-202ENST00000538485 ST3GAL1Q11201 340 aa22.99■■□□□ 1.27
EFCAB11-202ENST00000538485 TNIP1Q15025 636 aa22.99■■□□□ 1.27
EFCAB11-202ENST00000538485 INTS4Q96HW7 963 aaKnown RBP22.99■■□□□ 1.27
EFCAB11-202ENST00000538485 SLC3A2P08195 630 aaKnown RBP22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 YBX3P16989 372 aaKnown RBP eCLIP22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 NECAB1Q8N987 351 aa22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 DYNLL2Q96FJ2 89 aa22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 HDAC9Q9UKV0 1011 aa22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 CACNB3P54284 484 aa22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 IGDCC4Q8TDY8 1250 aa22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 ESR2Q92731 530 aa22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 ROBO3Q96MS0 1386 aa22.98■■□□□ 1.27
EFCAB11-202ENST00000538485 ORC4O43929 436 aa22.97■■□□□ 1.27
EFCAB11-202ENST00000538485 EVCP57679 992 aa22.97■■□□□ 1.27
EFCAB11-202ENST00000538485 PDE4BQ07343 736 aa22.97■■□□□ 1.27
EFCAB11-202ENST00000538485 STK3Q13188 491 aa22.97■■□□□ 1.27
EFCAB11-202ENST00000538485 CCDC83Q8IWF9 413 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms