RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SLC12A7Q9Y666 1083 aa8.51□□□□□ -1.05
MSH6-209ENST00000538136 YDJCA8MPS7 323 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 HIP1O00291 1037 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 PEX10O60683 326 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 FMNL1O95466 1100 aaPredicted RBP8.5□□□□□ -1.05
MSH6-209ENST00000538136 SLC1A4P43007 532 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 HMGCS2P54868 508 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 DGKZQ13574 1117 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 ARMC9Q7Z3E5 817 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 CTCFLQ8NI51 663 aaPredicted RBP8.5□□□□□ -1.05
MSH6-209ENST00000538136 NCOA5Q9HCD5 579 aaKnown RBP8.5□□□□□ -1.05
MSH6-209ENST00000538136 SSBP05455 408 aaKnown RBP eCLIP8.5□□□□□ -1.05
MSH6-209ENST00000538136 PLCG2P16885 1265 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 CDC37L1Q7L3B6 337 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 NCAPG2Q86XI2 1143 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 ZBTB21Q9ULJ3 1066 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 COL3A1P02461 1466 aaPredicted RBP8.5□□□□□ -1.05
MSH6-209ENST00000538136 SLIT3O75094 1523 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 FGAP02671 866 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 LIG1P18858 919 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 PTH1RQ03431 593 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 SEPT2Q15019 361 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 ZHX3Q9H4I2 956 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 PTPRZ1P23471 2315 aaPredicted RBP8.5□□□□□ -1.05
MSH6-209ENST00000538136 GLI3P10071 1580 aa8.5□□□□□ -1.05
MSH6-209ENST00000538136 KLF18A0A0U1RQI7 1052 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 M0R2C6 588 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 EVX2Q03828 476 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 HDAC1Q13547 482 aaPredicted RBP8.49□□□□□ -1.05
MSH6-209ENST00000538136 STRIP1Q5VSL9 837 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 CERS5Q8N5B7 392 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 ZNF784Q8NCA9 323 aaPredicted RBP8.49□□□□□ -1.05
MSH6-209ENST00000538136 CCDC43Q96MW1 224 aaKnown RBP8.49□□□□□ -1.05
MSH6-209ENST00000538136 ZNF287Q9HBT7 754 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 PDRG1Q9NUG6 133 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 SERPINB13Q9UIV8 391 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 IVNS1ABPQ9Y6Y0 642 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 PEAK1Q9H792 1746 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 PTPDC1A2A3K4 754 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 ICA1Q05084 483 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 APOBRQ0VD83 1088 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 TMC4Q7Z404 712 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 HEATR3Q7Z4Q2 680 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 CDHR2Q9BYE9 1310 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 ALAS1P13196 640 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 ATP5JP18859 108 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 ABCB5Q2M3G0 1257 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 SLC10A5Q5PT55 438 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 SMC5Q8IY18 1101 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 IFNL3Q8IZI9 196 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 CLMNQ96JQ2 1002 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 PANK2Q9BZ23 570 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 ZNF70Q9UC06 446 aaPredicted RBP8.49□□□□□ -1.05
MSH6-209ENST00000538136 BAZ2BQ9UIF8 2168 aaKnown RBP8.49□□□□□ -1.05
MSH6-209ENST00000538136 GLTPD2A6NH11 291 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 RGL2O15211 777 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 GSPT1P15170 499 aaKnown RBP8.49□□□□□ -1.05
MSH6-209ENST00000538136 CHMLP26374 656 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 WTAPQ15007 396 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 LRP10Q7Z4F1 713 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 ESR2Q92731 530 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 SLC26A6Q9BXS9 759 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 SMC3Q9UQE7 1217 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 ADGRB2O60241 1585 aa8.49□□□□□ -1.05
MSH6-209ENST00000538136 GOLGA8AA7E2F4 631 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 SHROOM1Q2M3G4 852 aaPredicted RBP8.48□□□□□ -1.05
MSH6-209ENST00000538136 OTUD7BQ6GQQ9 843 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 COL14A1Q05707 1796 aaKnown RBP8.48□□□□□ -1.05
MSH6-209ENST00000538136 MAST3O60307 1309 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 SETD1AO15047 1707 aaKnown RBP8.48□□□□□ -1.05
MSH6-209ENST00000538136 PRC1O43663 620 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 CFBP00751 764 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 IREB2P48200 963 aaKnown RBP8.48□□□□□ -1.05
MSH6-209ENST00000538136 PLCD1P51178 756 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 TRIOBPQ9H2D6 2365 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 RFX5P48382 616 aaPredicted RBP8.48□□□□□ -1.05
MSH6-209ENST00000538136 DCAF15Q66K64 600 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 NEK1Q96PY6 1258 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 ADARB2Q9NS39 739 aaKnown RBP8.48□□□□□ -1.05
MSH6-209ENST00000538136 LTN1O94822 1766 aa8.48□□□□□ -1.05
MSH6-209ENST00000538136 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 MYCLP12524 364 aaPredicted RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 CATIPQ7Z7H3 387 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 BMP2KQ9NSY1 1161 aaPredicted RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 GPRC5DQ9NZD1 345 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 SEC63Q9UGP8 760 aaKnown RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 SAMM50Q9Y512 469 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 CCDC171Q6TFL3 1326 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 TMEM232C9JQI7 657 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 ZFYP08048 801 aaPredicted RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 TAL1P17542 331 aaPredicted RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 CALML3P27482 149 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 GBA2Q9HCG7 927 aaPredicted RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 PSMA5P28066 241 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 TAF1CQ15572 869 aaPredicted RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 USP17L2Q6R6M4 530 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 PNMA8AQ86V59 439 aaPredicted RBP8.47□□□□□ -1.05
MSH6-209ENST00000538136 NCOA7Q8NI08 942 aa8.47□□□□□ -1.05
MSH6-209ENST00000538136 PHKBQ93100 1093 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms