RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 WDHD1O75717 1129 aaPredicted RBP13.91□□□□□ -0.18
SPARC-207ENST00000537849 FGRP09769 529 aa13.91□□□□□ -0.18
SPARC-207ENST00000537849 USP17L8P0C7I0 530 aa13.91□□□□□ -0.18
SPARC-207ENST00000537849 USP5P45974 858 aa13.91□□□□□ -0.18
SPARC-207ENST00000537849 PPARAQ07869 468 aa13.91□□□□□ -0.18
SPARC-207ENST00000537849 CFAP100Q494V2 611 aa13.91□□□□□ -0.18
SPARC-207ENST00000537849 AKNAD1Q5T1N1 836 aa13.91□□□□□ -0.18
SPARC-207ENST00000537849 C12orf60Q5U649 245 aa13.91□□□□□ -0.18
SPARC-207ENST00000537849 DHX32Q7L7V1 743 aaKnown RBP13.91□□□□□ -0.18
SPARC-207ENST00000537849 PRMT6Q96LA8 375 aaPredicted RBP13.91□□□□□ -0.18
SPARC-207ENST00000537849 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
SPARC-207ENST00000537849 CYP2D6P10635 497 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 MCM2P49736 904 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 AK2P54819 239 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 EIF6P56537 245 aaKnown RBP13.9□□□□□ -0.18
SPARC-207ENST00000537849 EVX2Q03828 476 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 MAPKAPK5Q8IW41 473 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 HSCBQ8IWL3 235 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
SPARC-207ENST00000537849 MTMR14Q8NCE2 650 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 STAG1Q8WVM7 1258 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 ZBED3Q96IU2 234 aaPredicted RBP13.9□□□□□ -0.18
SPARC-207ENST00000537849 MCM9Q9NXL9 1143 aa13.9□□□□□ -0.18
SPARC-207ENST00000537849 K7ELQ4 463 aaPredicted RBP13.89□□□□□ -0.19
SPARC-207ENST00000537849 MMP14P50281 582 aa13.89□□□□□ -0.19
SPARC-207ENST00000537849 NCOA7Q8NI08 942 aa13.89□□□□□ -0.19
SPARC-207ENST00000537849 DPF2Q92785 391 aa13.89□□□□□ -0.19
SPARC-207ENST00000537849 TCEANC2Q96MN5 208 aa13.89□□□□□ -0.19
SPARC-207ENST00000537849 DDX4Q9NQI0 724 aaKnown RBP13.89□□□□□ -0.19
SPARC-207ENST00000537849 HDAC9Q9UKV0 1011 aa13.89□□□□□ -0.19
SPARC-207ENST00000537849 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
SPARC-207ENST00000537849 RPS12P25398 132 aaKnown RBP13.88□□□□□ -0.19
SPARC-207ENST00000537849 PLCD1P51178 756 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 RBM5P52756 815 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPARC-207ENST00000537849 ANTXR2P58335 489 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 ZNF280AP59817 542 aaPredicted RBP13.88□□□□□ -0.19
SPARC-207ENST00000537849 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
SPARC-207ENST00000537849 MFSD6Q6ZSS7 791 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 FBXL16Q8N461 479 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 LARP6Q9BRS8 491 aaKnown RBP13.88□□□□□ -0.19
SPARC-207ENST00000537849 IDI2Q9BXS1 227 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 AGXT2Q9BYV1 514 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 ZSWIM5Q9P217 1185 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 ARPP21Q9UBL0 812 aaPredicted RBP13.88□□□□□ -0.19
SPARC-207ENST00000537849 LIMCH1Q9UPQ0 1083 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPARC-207ENST00000537849 NAV1Q8NEY1 1877 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 FLT1P17948 1338 aa13.88□□□□□ -0.19
SPARC-207ENST00000537849 TIAM2Q8IVF5 1701 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 SHTN1A0MZ66 631 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 SPDYE2BA6NHP3 402 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 B4E1Z4 1266 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 SPDYE6P0CI01 402 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 MCM5P33992 734 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 NFIAQ12857 509 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 DLGAP5Q15398 846 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 Q6ZUG5 572 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 CHST3Q7LGC8 479 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 ZFPM1Q8IX07 1006 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 TMX3Q96JJ7 454 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 LRRC2Q9BYS8 371 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 RNF41Q9H4P4 317 aaPredicted RBP13.87□□□□□ -0.19
SPARC-207ENST00000537849 TDRD3Q9H7E2 651 aaKnown RBP13.87□□□□□ -0.19
SPARC-207ENST00000537849 FAM198AQ9UFP1 575 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 SAP30BPQ9UHR5 308 aaKnown RBP13.87□□□□□ -0.19
SPARC-207ENST00000537849 NEDD4P46934 1319 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 WDR19Q8NEZ3 1342 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 ZNF541Q9H0D2 1346 aa13.87□□□□□ -0.19
SPARC-207ENST00000537849 PRC1O43663 620 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 ORC4O43929 436 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 PCP11498 1178 aaKnown RBP13.86□□□□□ -0.19
SPARC-207ENST00000537849 GMPSP49915 693 aaPredicted RBP13.86□□□□□ -0.19
SPARC-207ENST00000537849 TRDNQ13061 729 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 CUL4AQ13619 759 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 STK11IPQ8N1F8 1099 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 KRT23Q9C075 422 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 CNNM2Q9H8M5 875 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 GPHNQ9NQX3 736 aaPredicted RBP13.86□□□□□ -0.19
SPARC-207ENST00000537849 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
SPARC-207ENST00000537849 CNOT7Q9UIV1 285 aaKnown RBP13.86□□□□□ -0.19
SPARC-207ENST00000537849 TPCN1Q9ULQ1 816 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 GJA3Q9Y6H8 435 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 LAMB1P07942 1786 aa13.86□□□□□ -0.19
SPARC-207ENST00000537849 DDX60LQ5H9U9 1706 aaKnown RBP13.85□□□□□ -0.19
SPARC-207ENST00000537849 POLR3DP05423 398 aaPredicted RBP13.85□□□□□ -0.19
SPARC-207ENST00000537849 ANKRD1Q15327 319 aa13.85□□□□□ -0.19
SPARC-207ENST00000537849 GPR162Q16538 588 aa13.85□□□□□ -0.19
SPARC-207ENST00000537849 RALYLQ86SE5 291 aaKnown RBP13.85□□□□□ -0.19
SPARC-207ENST00000537849 IGDCC4Q8TDY8 1250 aa13.85□□□□□ -0.19
SPARC-207ENST00000537849 DYNLL2Q96FJ2 89 aa13.85□□□□□ -0.19
SPARC-207ENST00000537849 ZSCAN31Q96LW9 406 aaPredicted RBP13.85□□□□□ -0.19
SPARC-207ENST00000537849 OSBPL5Q9H0X9 879 aaPredicted RBP13.85□□□□□ -0.19
SPARC-207ENST00000537849 ZNF70Q9UC06 446 aaPredicted RBP13.85□□□□□ -0.19
SPARC-207ENST00000537849 ROBO3Q96MS0 1386 aa13.84□□□□□ -0.19
SPARC-207ENST00000537849 KDM4AO75164 1064 aa13.84□□□□□ -0.19
SPARC-207ENST00000537849 ENTPD3O75355 529 aa13.84□□□□□ -0.19
SPARC-207ENST00000537849 SLC3A2P08195 630 aaKnown RBP13.84□□□□□ -0.19
SPARC-207ENST00000537849 CACNB3P54284 484 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms