RNA–Protein interactions for RNA: ENST00000537739.5

HDGF-210, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-210ENST00000537739 USP28Q96RU2 1077 aa30.25■■■□□ 2.43
HDGF-210ENST00000537739 CFAP45Q9UL16 551 aa30.25■■■□□ 2.43
HDGF-210ENST00000537739 GOLGA8AA7E2F4 631 aa30.24■■■□□ 2.43
HDGF-210ENST00000537739 GIMAP6Q6P9H5 292 aa30.24■■■□□ 2.43
HDGF-210ENST00000537739 KLRG2A4D1S0 409 aaPredicted RBP30.24■■■□□ 2.43
HDGF-210ENST00000537739 CCDC69A6NI79 296 aa30.24■■■□□ 2.43
HDGF-210ENST00000537739 USP17L12C9JPN9 530 aa30.24■■■□□ 2.43
HDGF-210ENST00000537739 USP17L21D6R901 530 aa30.24■■■□□ 2.43
HDGF-210ENST00000537739 PLSCR1O15162 318 aa30.24■■■□□ 2.43
HDGF-210ENST00000537739 RANBP6O60518 1105 aaKnown RBP30.24■■■□□ 2.43
HDGF-210ENST00000537739 UFL1O94874 794 aa30.24■■■□□ 2.43
HDGF-210ENST00000537739 C15orf52Q6ZUT6 534 aaKnown RBP30.24■■■□□ 2.43
HDGF-210ENST00000537739 RCOR1Q9UKL0 485 aa30.23■■■□□ 2.43
HDGF-210ENST00000537739 UBE2Q2LH0YL09 131 aa30.23■■■□□ 2.43
HDGF-210ENST00000537739 WTAPQ15007 396 aa30.23■■■□□ 2.43
HDGF-210ENST00000537739 DCP1AQ9NPI6 582 aaPredicted RBP30.23■■■□□ 2.43
HDGF-210ENST00000537739 BBOX1O75936 387 aa30.22■■■□□ 2.43
HDGF-210ENST00000537739 PRDM1O75626 825 aa30.21■■■□□ 2.43
HDGF-210ENST00000537739 LETM1O95202 739 aaPredicted RBP30.21■■■□□ 2.43
HDGF-210ENST00000537739 SPTY2D1Q68D10 685 aaPredicted RBP30.21■■■□□ 2.43
HDGF-210ENST00000537739 ZNF804AQ7Z570 1209 aa30.21■■■□□ 2.43
HDGF-210ENST00000537739 DZIP1Q86YF9 867 aaKnown RBP30.21■■■□□ 2.43
HDGF-210ENST00000537739 WDR66Q8TBY9 1149 aa30.21■■■□□ 2.43
HDGF-210ENST00000537739 RTN4Q9NQC3 1192 aaKnown RBP30.21■■■□□ 2.43
HDGF-210ENST00000537739 CCDC88AQ3V6T2 1871 aa30.21■■■□□ 2.43
HDGF-210ENST00000537739 GOLGA6L4A6NEF3 574 aa30.21■■■□□ 2.43
HDGF-210ENST00000537739 CRNKL1Q9BZJ0 848 aaKnown RBP30.21■■■□□ 2.43
HDGF-210ENST00000537739 POLLQ9UGP5 575 aa30.21■■■□□ 2.43
HDGF-210ENST00000537739 KIF28PB7ZC32 967 aa30.2■■■□□ 2.43
HDGF-210ENST00000537739 LDHBP07195 334 aaKnown RBP30.2■■■□□ 2.43
HDGF-210ENST00000537739 SEC23AQ15436 765 aa30.2■■■□□ 2.43
HDGF-210ENST00000537739 ESR2Q92731 530 aa30.2■■■□□ 2.43
HDGF-210ENST00000537739 CRAMP1Q96RY5 1269 aa30.2■■■□□ 2.43
HDGF-210ENST00000537739 ALG1Q9BT22 464 aa30.2■■■□□ 2.43
HDGF-210ENST00000537739 GGA1Q9UJY5 639 aa30.2■■■□□ 2.43
HDGF-210ENST00000537739 POLR3DP05423 398 aaPredicted RBP30.19■■■□□ 2.42
HDGF-210ENST00000537739 FGRP09769 529 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 CYP2D6P10635 497 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 ATP2B4P23634 1241 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 SART3Q15020 963 aaKnown RBP30.19■■■□□ 2.42
HDGF-210ENST00000537739 CD209Q9NNX6 404 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 DACT1Q9NYF0 836 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 MYH2Q9UKX2 1941 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 CDKL5O76039 1030 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 PPP1R9BQ96SB3 815 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 MTA3Q9BTC8 594 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 FUCA2Q9BTY2 467 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 MAST2Q6P0Q8 1798 aa30.19■■■□□ 2.42
HDGF-210ENST00000537739 DIXDC1Q155Q3 683 aa30.18■■■□□ 2.42
HDGF-210ENST00000537739 ZNF396Q96N95 335 aaPredicted RBP30.18■■■□□ 2.42
HDGF-210ENST00000537739 TAOK2Q9UL54 1235 aa30.18■■■□□ 2.42
HDGF-210ENST00000537739 IARSP41252 1262 aaKnown RBP30.18■■■□□ 2.42
HDGF-210ENST00000537739 TBC1D16Q8TBP0 767 aa30.18■■■□□ 2.42
HDGF-210ENST00000537739 UBAC1Q9BSL1 405 aa30.18■■■□□ 2.42
HDGF-210ENST00000537739 DUOX1Q9NRD9 1551 aa30.17■■■□□ 2.42
HDGF-210ENST00000537739 TNKSO95271 1327 aa30.17■■■□□ 2.42
HDGF-210ENST00000537739 ERICH2A1L162 156 aa30.17■■■□□ 2.42
HDGF-210ENST00000537739 CAMK4Q16566 473 aa30.17■■■□□ 2.42
HDGF-210ENST00000537739 CPLX2Q6PUV4 134 aaKnown RBP30.17■■■□□ 2.42
HDGF-210ENST00000537739 SYNE3Q6ZMZ3 975 aa30.17■■■□□ 2.42
HDGF-210ENST00000537739 ATP8A2Q9NTI2 1148 aa30.17■■■□□ 2.42
HDGF-210ENST00000537739 PODXL2Q9NZ53 605 aa30.17■■■□□ 2.42
HDGF-210ENST00000537739 NID2Q14112 1375 aa30.17■■■□□ 2.42
HDGF-210ENST00000537739 NR1I2O75469 434 aa30.16■■■□□ 2.42
HDGF-210ENST00000537739 KIF23Q02241 960 aaPredicted RBP30.16■■■□□ 2.42
HDGF-210ENST00000537739 ATL3Q6DD88 541 aa30.16■■■□□ 2.42
HDGF-210ENST00000537739 ANKRD31Q8N7Z5 1873 aa30.16■■■□□ 2.42
HDGF-210ENST00000537739 CCDC173Q0VFZ6 552 aa30.16■■■□□ 2.42
HDGF-210ENST00000537739 ZNF654Q8IZM8 581 aa30.16■■■□□ 2.42
HDGF-210ENST00000537739 NLGN1Q8N2Q7 840 aa30.16■■■□□ 2.42
HDGF-210ENST00000537739 TMTC2Q8N394 836 aa30.16■■■□□ 2.42
HDGF-210ENST00000537739 ENAHQ8N8S7 591 aaPredicted RBP30.16■■■□□ 2.42
HDGF-210ENST00000537739 BICD2Q8TD16 824 aa30.16■■■□□ 2.42
HDGF-210ENST00000537739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.16■■■□□ 2.422e-6■■■■■ 37.3
HDGF-210ENST00000537739 CMTR1Q8N1G2 835 aaKnown RBP30.15■■■□□ 2.42
HDGF-210ENST00000537739 SLC26A6Q9BXS9 759 aa30.15■■■□□ 2.42
HDGF-210ENST00000537739 IL1R1P14778 569 aa30.15■■■□□ 2.42
HDGF-210ENST00000537739 RTN1Q16799 776 aa30.15■■■□□ 2.42
HDGF-210ENST00000537739 KRT40Q6A162 431 aa30.15■■■□□ 2.42
HDGF-210ENST00000537739 TMED8Q6PL24 325 aaPredicted RBP30.15■■■□□ 2.42
HDGF-210ENST00000537739 SH3RF3Q8TEJ3 882 aaPredicted RBP30.15■■■□□ 2.42
HDGF-210ENST00000537739 ZSCAN10Q96SZ4 725 aaPredicted RBP30.15■■■□□ 2.42
HDGF-210ENST00000537739 ECM29Q5VYK3 1845 aa30.14■■■□□ 2.42
HDGF-210ENST00000537739 IFNAR1P17181 557 aa30.14■■■□□ 2.42
HDGF-210ENST00000537739 GUCY1A2P33402 732 aa30.14■■■□□ 2.42
HDGF-210ENST00000537739 CLIC4Q9Y696 253 aa30.14■■■□□ 2.42
HDGF-210ENST00000537739 FMNL1O95466 1100 aaPredicted RBP30.13■■■□□ 2.41
HDGF-210ENST00000537739 USP17L8P0C7I0 530 aa30.13■■■□□ 2.41
HDGF-210ENST00000537739 SSRP1Q08945 709 aaKnown RBP30.13■■■□□ 2.41
HDGF-210ENST00000537739 SLC4A8Q2Y0W8 1093 aa30.13■■■□□ 2.41
HDGF-210ENST00000537739 NUP133Q8WUM0 1156 aa30.13■■■□□ 2.41
HDGF-210ENST00000537739 NUP62CLQ9H1M0 184 aa30.13■■■□□ 2.41
HDGF-210ENST00000537739 RTEL1Q9NZ71 1219 aa30.13■■■□□ 2.41
HDGF-210ENST00000537739 MKRN1Q9UHC7 482 aaKnown RBP30.13■■■□□ 2.41
HDGF-210ENST00000537739 NBPF11Q86T75 865 aa30.13■■■□□ 2.41
HDGF-210ENST00000537739 CCDC82Q8N4S0 544 aa30.13■■■□□ 2.41
HDGF-210ENST00000537739 FANCBQ8NB91 859 aa30.13■■■□□ 2.41
HDGF-210ENST00000537739 ANP32BQ92688 251 aaKnown RBP30.13■■■□□ 2.41
HDGF-210ENST00000537739 RXRBP28702 533 aa30.12■■■□□ 2.41
HDGF-210ENST00000537739 SBK1Q52WX2 424 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms