RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 USP17L12C9JPN9 530 aa18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 USP17L21D6R901 530 aa18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 CTDSPL2Q05D32 466 aa18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 NKX2-3Q8TAU0 364 aa18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 TRPM4Q8TD43 1214 aa18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 ATP8A2Q9NTI2 1148 aa18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 MCM9Q9NXL9 1143 aa18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 SCAF8Q9UPN6 1271 aaKnown RBP18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 ZMYM6O95789 1325 aa18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 RPAP1Q9BWH6 1393 aaPredicted RBP18.65■□□□□ 0.58
SFSWAP-206ENST00000537582 MINDY4BA8MYZ0 360 aa18.64■□□□□ 0.58
SFSWAP-206ENST00000537582 WNT10BO00744 389 aa18.64■□□□□ 0.58
SFSWAP-206ENST00000537582 CPA1P15085 419 aa18.64■□□□□ 0.58
SFSWAP-206ENST00000537582 MTMR14Q8NCE2 650 aa18.64■□□□□ 0.58
SFSWAP-206ENST00000537582 FAM198AQ9UFP1 575 aa18.64■□□□□ 0.58
SFSWAP-206ENST00000537582 CTNNA3Q9UI47 895 aa18.64■□□□□ 0.58
SFSWAP-206ENST00000537582 NAV1Q8NEY1 1877 aa18.64■□□□□ 0.57
SFSWAP-206ENST00000537582 DDX60LQ5H9U9 1706 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-206ENST00000537582 ZNF213O14771 459 aa18.64■□□□□ 0.57
SFSWAP-206ENST00000537582 TCP10Q12799 353 aa18.64■□□□□ 0.57
SFSWAP-206ENST00000537582 IMMTQ16891 758 aaKnown RBP18.64■□□□□ 0.57
SFSWAP-206ENST00000537582 CERS3Q8IU89 383 aa18.64■□□□□ 0.57
SFSWAP-206ENST00000537582 ZNF70Q9UC06 446 aaPredicted RBP18.64■□□□□ 0.57
SFSWAP-206ENST00000537582 ECM29Q5VYK3 1845 aa18.64■□□□□ 0.57
SFSWAP-206ENST00000537582 PPARAQ07869 468 aa18.63■□□□□ 0.57
SFSWAP-206ENST00000537582 KIF4BQ2VIQ3 1234 aa18.63■□□□□ 0.57
SFSWAP-206ENST00000537582 RNF20Q5VTR2 975 aa18.63■□□□□ 0.57
SFSWAP-206ENST00000537582 GIMAP6Q6P9H5 292 aa18.63■□□□□ 0.57
SFSWAP-206ENST00000537582 UPF3BQ9BZI7 483 aaKnown RBP18.63■□□□□ 0.57
SFSWAP-206ENST00000537582 LAMA4Q16363 1823 aa18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 FOCADQ5VW36 1801 aa18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 TCP10L2B9ZVM9 353 aa18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 E7EWF7 191 aa18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 SLURP2P0DP57 97 aa18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 ZKSCAN1P17029 563 aaPredicted RBP18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 ANAPC15P60006 121 aa18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 SPDYE2Q495Y8 402 aa18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 JAKMIP1Q96N16 626 aaKnown RBP18.62■□□□□ 0.57
SFSWAP-206ENST00000537582 H7C1D1 291 aa18.61■□□□□ 0.57
SFSWAP-206ENST00000537582 PLCD1P51178 756 aa18.61■□□□□ 0.57
SFSWAP-206ENST00000537582 HIRAP54198 1017 aaPredicted RBP18.61■□□□□ 0.57
SFSWAP-206ENST00000537582 IL17RAQ96F46 866 aa18.61■□□□□ 0.57
SFSWAP-206ENST00000537582 IDI2Q9BXS1 227 aa18.61■□□□□ 0.57
SFSWAP-206ENST00000537582 OSBPL5Q9H0X9 879 aaPredicted RBP18.61■□□□□ 0.57
SFSWAP-206ENST00000537582 VEZTQ9HBM0 779 aa18.61■□□□□ 0.57
SFSWAP-206ENST00000537582 TSGA10IPQ3SY00 556 aa18.6■□□□□ 0.57
SFSWAP-206ENST00000537582 SH3BP5LQ7L8J4 393 aa18.6■□□□□ 0.57
SFSWAP-206ENST00000537582 DYNLL2Q96FJ2 89 aa18.6■□□□□ 0.57
SFSWAP-206ENST00000537582 DDRGK1Q96HY6 314 aa18.6■□□□□ 0.57
SFSWAP-206ENST00000537582 ARPP21Q9UBL0 812 aaPredicted RBP18.6■□□□□ 0.57
SFSWAP-206ENST00000537582 NEDD4P46934 1319 aa18.6■□□□□ 0.57
SFSWAP-206ENST00000537582 CNTNAP1P78357 1384 aa18.6■□□□□ 0.57
SFSWAP-206ENST00000537582 LAMB1P07942 1786 aa18.6■□□□□ 0.57
SFSWAP-206ENST00000537582 GLTPD2A6NH11 291 aa18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 CASTP20810 708 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 SBK1Q52WX2 424 aa18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 C12orf60Q5U649 245 aa18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 DPY19L2Q6NUT2 758 aa18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 CDAN1Q8IWY9 1227 aa18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 TCEANC2Q96MN5 208 aa18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 ZC3H4Q9UPT8 1303 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 DDTLA6NHG4 134 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 POLR3DP05423 398 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 SLC44A5Q8NCS7 719 aa18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 L3MBTL3Q96JM7 780 aaPredicted RBP18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 ANAPC4Q9UJX5 808 aa18.59■□□□□ 0.57
SFSWAP-206ENST00000537582 PRDM1O75626 825 aa18.58■□□□□ 0.56
SFSWAP-206ENST00000537582 LMOD1P29536 600 aaPredicted RBP18.58■□□□□ 0.56
SFSWAP-206ENST00000537582 POTECB2RU33 542 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 MMP14P50281 582 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 AKNAD1Q5T1N1 836 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 CHST3Q7LGC8 479 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 NEK1Q96PY6 1258 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 ZSWIM6Q9HCJ5 1215 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 TMOD2Q9NZR1 351 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 HACL1Q9UJ83 578 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 MYH1P12882 1939 aa18.57■□□□□ 0.56
SFSWAP-206ENST00000537582 MYO1BO43795 1136 aa18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 NEK4P51957 841 aa18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 RABEP1Q15276 862 aa18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 RRP12Q5JTH9 1297 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 ANGEL2Q5VTE6 544 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 STAG1Q8WVM7 1258 aa18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 TMEM39BQ9GZU3 492 aa18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 ADARB2Q9NS39 739 aaKnown RBP18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 ROBO3Q96MS0 1386 aa18.56■□□□□ 0.56
SFSWAP-206ENST00000537582 FAM196BA6NMK8 535 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 B4E1Z4 1266 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 KRT32Q14532 448 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 ZSCAN29Q8IWY8 852 aaPredicted RBP18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 GGA3Q9NZ52 723 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 SIPA1L1O43166 1804 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 ENTPD3O75355 529 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 NPM3O75607 178 aaKnown RBP18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 BLOC1S2Q6QNY1 142 aa18.55■□□□□ 0.56
SFSWAP-206ENST00000537582 MFSD6Q6ZSS7 791 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms