RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 OCLNQ16625 522 aa10.8□□□□□ -0.68
LMO3-216ENST00000537568 KCNH5Q8NCM2 988 aa10.8□□□□□ -0.68
LMO3-216ENST00000537568 ENAMQ9NRM1 1142 aa10.8□□□□□ -0.68
LMO3-216ENST00000537568 EGFL7Q9UHF1 273 aa10.8□□□□□ -0.68
LMO3-216ENST00000537568 PHF24Q9UPV7 400 aa10.8□□□□□ -0.68
LMO3-216ENST00000537568 DDNO94850 711 aaPredicted RBP10.79□□□□□ -0.68
LMO3-216ENST00000537568 MKNK1Q9BUB5 465 aa10.79□□□□□ -0.68
LMO3-216ENST00000537568 LAMA3Q16787 3333 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 ADAMTSL1Q8N6G6 1762 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 ICMTO60725 284 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 GDF11O95390 407 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 MAPK1P28482 360 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 IRS1P35568 1242 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 MAP2K3P46734 347 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 TMEM151AQ8N4L1 468 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
LMO3-216ENST00000537568 ANKRD24Q8TF21 1146 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 SCARF2Q96GP6 870 aaPredicted RBP10.78□□□□□ -0.68
LMO3-216ENST00000537568 ABHD17AQ96GS6 310 aa10.78□□□□□ -0.68
LMO3-216ENST00000537568 TAF1DQ9H5J8 278 aaPredicted RBP10.78□□□□□ -0.68
LMO3-216ENST00000537568 ABT1Q9ULW3 272 aaKnown RBP10.78□□□□□ -0.68
LMO3-216ENST00000537568 MAP2P11137 1827 aaKnown RBP10.77□□□□□ -0.68
LMO3-216ENST00000537568 CDK2AP1O14519 115 aa10.77□□□□□ -0.69
LMO3-216ENST00000537568 BNIP3LO60238 219 aa10.77□□□□□ -0.69
LMO3-216ENST00000537568 GYS1P13807 737 aa10.77□□□□□ -0.69
LMO3-216ENST00000537568 TMF1P82094 1093 aa10.77□□□□□ -0.69
LMO3-216ENST00000537568 FMR1Q06787 632 aaKnown RBP eCLIP10.77□□□□□ -0.69
LMO3-216ENST00000537568 NLGN1Q8N2Q7 840 aa10.77□□□□□ -0.69
LMO3-216ENST00000537568 GTF3C2Q8WUA4 911 aaPredicted RBP10.77□□□□□ -0.69
LMO3-216ENST00000537568 OXCT2Q9BYC2 517 aaPredicted RBP10.77□□□□□ -0.69
LMO3-216ENST00000537568 NDFIP2Q9NV92 336 aa10.77□□□□□ -0.69
LMO3-216ENST00000537568 ZNF358Q9NW07 568 aa10.77□□□□□ -0.69
LMO3-216ENST00000537568 SEPT3Q9UH03 358 aa10.77□□□□□ -0.69
LMO3-216ENST00000537568 ATXN7L1Q9ULK2 861 aaPredicted RBP10.77□□□□□ -0.69
LMO3-216ENST00000537568 TCF3P15923 654 aa10.76□□□□□ -0.69
LMO3-216ENST00000537568 ITPK1Q13572 414 aa10.76□□□□□ -0.69
LMO3-216ENST00000537568 CABP1Q9NZU7 370 aa10.76□□□□□ -0.69
LMO3-216ENST00000537568 BACH1O14867 736 aa10.75□□□□□ -0.69
LMO3-216ENST00000537568 CA12O43570 354 aa10.75□□□□□ -0.69
LMO3-216ENST00000537568 DDR1Q08345 913 aa10.75□□□□□ -0.69
LMO3-216ENST00000537568 GRM1Q13255 1194 aa10.75□□□□□ -0.69
LMO3-216ENST00000537568 NBPF1Q3BBV0 1214 aa10.75□□□□□ -0.69
LMO3-216ENST00000537568 NEDD1Q8NHV4 660 aa10.75□□□□□ -0.69
LMO3-216ENST00000537568 HTTP42858 3142 aa10.75□□□□□ -0.69
LMO3-216ENST00000537568 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
LMO3-216ENST00000537568 OIP5O43482 229 aa10.74□□□□□ -0.69
LMO3-216ENST00000537568 FGFR3P22607 806 aa10.74□□□□□ -0.69
LMO3-216ENST00000537568 MAP2K2P36507 400 aa10.74□□□□□ -0.69
LMO3-216ENST00000537568 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
LMO3-216ENST00000537568 MAP1SQ66K74 1059 aaPredicted RBP10.74□□□□□ -0.69
LMO3-216ENST00000537568 ZCRB1Q8TBF4 217 aaKnown RBP10.74□□□□□ -0.69
LMO3-216ENST00000537568 ZCCHC2Q9C0B9 1178 aaKnown RBP10.74□□□□□ -0.69
LMO3-216ENST00000537568 PARP3Q9Y6F1 533 aa10.74□□□□□ -0.69
LMO3-216ENST00000537568 DNMT3AQ9Y6K1 912 aaPredicted RBP10.74□□□□□ -0.69
LMO3-216ENST00000537568 TTC21BQ7Z4L5 1316 aa10.74□□□□□ -0.69
LMO3-216ENST00000537568 CEP290O15078 2479 aa10.74□□□□□ -0.69
LMO3-216ENST00000537568 FAM208AQ9UK61 1670 aaKnown RBP10.73□□□□□ -0.69
LMO3-216ENST00000537568 C2CD2LO14523 706 aa10.73□□□□□ -0.69
LMO3-216ENST00000537568 C21orf2O43822 256 aa10.73□□□□□ -0.69
LMO3-216ENST00000537568 ECE1P42892 770 aa10.73□□□□□ -0.69
LMO3-216ENST00000537568 TAGLNQ01995 201 aaKnown RBP10.73□□□□□ -0.69
LMO3-216ENST00000537568 FIGNL1Q6PIW4 674 aa10.73□□□□□ -0.69
LMO3-216ENST00000537568 CNTROBQ8N137 903 aa10.73□□□□□ -0.69
LMO3-216ENST00000537568 SCHIP1Q9P0W5 487 aaPredicted RBP10.73□□□□□ -0.69
LMO3-216ENST00000537568 LOC102724428A0A0B4J2F2 783 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 A0A1W2PNR3 127 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 BMP4P12644 408 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 HMGB2P26583 209 aaKnown RBP10.72□□□□□ -0.69
LMO3-216ENST00000537568 EPHA4P54764 986 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 SIK1P57059 783 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 CTBSQ01459 385 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 ARSJQ5FYB0 599 aaPredicted RBP10.72□□□□□ -0.69
LMO3-216ENST00000537568 CST9Q5W186 159 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 KANK3Q6NY19 840 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 C1orf229Q6ZS94 237 aaPredicted RBP10.72□□□□□ -0.69
LMO3-216ENST00000537568 NLRP8Q86W28 1048 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 TSEN2Q8NCE0 465 aaKnown RBP10.72□□□□□ -0.69
LMO3-216ENST00000537568 YTHDC1Q96MU7 727 aaKnown RBP10.72□□□□□ -0.69
LMO3-216ENST00000537568 DDX21Q9NR30 783 aaKnown RBP eCLIP10.72□□□□□ -0.69
LMO3-216ENST00000537568 ZDHHC3Q9NYG2 299 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 DCTN4Q9UJW0 460 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 CNTNAP5Q8WYK1 1306 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 CENPFP49454 3210 aa10.72□□□□□ -0.69
LMO3-216ENST00000537568 CCER2I3L3R5 266 aa10.71□□□□□ -0.69
LMO3-216ENST00000537568 TATP17735 454 aaPredicted RBP10.71□□□□□ -0.69
LMO3-216ENST00000537568 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.69
LMO3-216ENST00000537568 MPRIPQ6WCQ1 1025 aa10.71□□□□□ -0.69
LMO3-216ENST00000537568 CAPN12Q6ZSI9 719 aa10.71□□□□□ -0.69
LMO3-216ENST00000537568 GAS2L2Q8NHY3 880 aa10.71□□□□□ -0.69
LMO3-216ENST00000537568 ZDHHC1Q8WTX9 485 aa10.71□□□□□ -0.69
LMO3-216ENST00000537568 ZIC5Q96T25 663 aa10.71□□□□□ -0.69
LMO3-216ENST00000537568 PCDHGC4Q9Y5F7 938 aa10.71□□□□□ -0.69
LMO3-216ENST00000537568 SHISA8B8ZZ34 492 aa10.7□□□□□ -0.7
LMO3-216ENST00000537568 FOXK2Q01167 660 aa10.7□□□□□ -0.7
LMO3-216ENST00000537568 FKBP5Q13451 457 aaPredicted RBP10.7□□□□□ -0.7
LMO3-216ENST00000537568 EAPPQ56P03 285 aaPredicted RBP10.7□□□□□ -0.7
LMO3-216ENST00000537568 ZSCAN29Q8IWY8 852 aaPredicted RBP10.7□□□□□ -0.7
LMO3-216ENST00000537568 ASB16Q96NS5 453 aa10.7□□□□□ -0.7
LMO3-216ENST00000537568 HCN2Q9UL51 889 aa10.7□□□□□ -0.7
LMO3-216ENST00000537568 SUPT16HQ9Y5B9 1047 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms