RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MYL5Q02045 173 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 IFT88Q13099 833 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 NFE2L2Q16236 605 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 CRELD2Q6UXH1 353 aaPredicted RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 FMR1NBQ8N0W7 255 aaPredicted RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 C8orf58Q8NAV2 365 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 CCHCR1Q8TD31 782 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 NSMCE1Q8WV22 266 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 CCDC97Q96F63 343 aaPredicted RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 RPGRIP1Q96KN7 1286 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 RUFY1Q96T51 708 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 YIPF3Q9GZM5 350 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 EBF2Q9HAK2 575 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 MYO1AQ9UBC5 1043 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 PCDHGC5Q9Y5F6 944 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 ATP1A3P13637 1013 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 RANBP1P43487 201 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 TBX2Q13207 712 aaPredicted RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 KRT24Q2M2I5 525 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 ADCK5Q3MIX3 580 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 CC2D2BQ6DHV5 1058 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 NOA1Q8NC60 698 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 PLEKHG4BQ96PX9 1271 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 PUS7Q96PZ0 661 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 NAA15Q9BXJ9 866 aaKnown RBP9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 RIPOR2Q9Y4F9 1068 aa9.63□□□□□ -0.87
SRGAP1-202ENST00000537556 SRRM3A6NNA2 597 aaPredicted RBP9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 EPB41P11171 864 aaKnown RBP9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 G3BP1Q13283 466 aaKnown RBP eCLIP9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 CCDC38Q502W7 563 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 LRRC23Q53EV4 343 aaPredicted RBP9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 ARHGAP22Q7Z5H3 698 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 ZNF473Q8WTR7 871 aaKnown RBP9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 TSC22D3Q99576 134 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 DESI2Q9BSY9 194 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 SELENOOQ9BVL4 669 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 TSGA10Q9BZW7 698 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 MRPL44Q9H9J2 332 aaKnown RBP9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 BLOC1S6Q9UL45 172 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 KDRP35968 1356 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 BIN1O00499 593 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 MGRN1O60291 552 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 PPFIA3O75145 1194 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 GOLGA8FQ08AF8 430 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 GOLGA8DPQ0D2H9 430 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 MTX1Q13505 466 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 AMOTQ4VCS5 1084 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 SPECC1Q5M775 1068 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 CFAP70Q5T0N1 1121 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 SPECC1LQ69YQ0 1117 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 TC2NQ8N9U0 490 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 FANCLQ9NW38 375 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
SRGAP1-202ENST00000537556 ZSCAN9O15535 394 aaPredicted RBP9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 LUC7L3O95232 432 aaKnown RBP9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 PDCLQ13371 301 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 CCDC70Q6NSX1 233 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 ZFAND2BQ8WV99 257 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 DPF2Q92785 391 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 P3H4Q92791 437 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 BRF1Q92994 677 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 ACSBG1Q96GR2 724 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 ALDH8A1Q9H2A2 487 aaPredicted RBP9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 C15orf41Q9Y2V0 281 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 U3KPZ7 1027 aaPredicted RBP9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 MYO3AQ8NEV4 1616 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 A0A1W2PQ27 194 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 A0A1W2PQ64 194 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 A0A1W2PQD8 194 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 CCT4P50991 539 aaKnown RBP9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 XRCC4Q13426 336 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 DBN1Q16643 649 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 CCDC57Q2TAC2 916 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 ADALQ6DHV7 355 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 APLFQ8IW19 511 aaPredicted RBP9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 MIPOL1Q8TD10 442 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 CUL5Q93034 780 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 EPAS1Q99814 870 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 FAM184BQ9ULE4 1060 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 TTF2Q9UNY4 1162 aaKnown RBP9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 ADGRG1Q9Y653 693 aa9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 INO80Q9ULG1 1556 aaPredicted RBP9.61□□□□□ -0.87
SRGAP1-202ENST00000537556 ECEL1O95672 775 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 PYGBP11216 843 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 LSP1P33241 339 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 MYO1EQ12965 1108 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 BLOC1S2Q6QNY1 142 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 C6orf89Q6UWU4 347 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 ARMCX6Q7L4S7 300 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 MYLK4Q86YV6 388 aaPredicted RBP9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 TBC1D31Q96DN5 1066 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 ABCA9Q8IUA7 1624 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 FAM107AO95990 144 aa9.6□□□□□ -0.87
SRGAP1-202ENST00000537556 SLC4A2P04920 1241 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms