RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 ST5P78524 1137 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 UBAP2LQ14157 1087 aaKnown RBP9.16□□□□□ -0.94
YBX3-206ENST00000536823 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 LRP10Q7Z4F1 713 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 NBPF5PQ86XG9 351 aaPredicted RBP9.16□□□□□ -0.94
YBX3-206ENST00000536823 ATXN7L1Q9ULK2 861 aaPredicted RBP9.16□□□□□ -0.94
YBX3-206ENST00000536823 NIP7Q9Y221 180 aaKnown RBP eCLIP9.16□□□□□ -0.94
YBX3-206ENST00000536823 CEP350Q5VT06 3117 aa9.16□□□□□ -0.94
YBX3-206ENST00000536823 IBTKQ9P2D0 1353 aaPredicted RBP9.15□□□□□ -0.94
YBX3-206ENST00000536823 APAF1O14727 1248 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 HOXB7P09629 217 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 MYL6BP14649 208 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 RFC5P40937 340 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 HLFQ16534 295 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 CCDC184Q52MB2 194 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 ARTNQ5T4W7 220 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 KIF6Q6ZMV9 814 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 TTLL7Q6ZT98 887 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 TTLL6Q8N841 843 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 BANK1Q8NDB2 785 aa9.15□□□□□ -0.94
YBX3-206ENST00000536823 ARFGEF2Q9Y6D5 1785 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 A0A1B0GTH6 734 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 ANP32CO43423 234 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 EIF2S2P20042 333 aaKnown RBP9.14□□□□□ -0.95
YBX3-206ENST00000536823 MCM6Q14566 821 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 LBRQ14739 615 aaKnown RBP9.14□□□□□ -0.95
YBX3-206ENST00000536823 RSPO4Q2I0M5 234 aaPredicted RBP9.14□□□□□ -0.95
YBX3-206ENST00000536823 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 PROSER3Q2NL68 480 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 NBPF11Q86T75 865 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 ARHGEF10LQ9HCE6 1279 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 LAS1LQ9Y4W2 734 aaKnown RBP9.14□□□□□ -0.95
YBX3-206ENST00000536823 SBF1O95248 1867 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 RIC1Q4ADV7 1423 aa9.14□□□□□ -0.95
YBX3-206ENST00000536823 ABCC12Q96J65 1359 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 UBN2Q6ZU65 1347 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 ANXA1P04083 346 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 ZNF853P0CG23 659 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 SRGNP10124 158 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 FGFR3P22607 806 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 CALD1Q05682 793 aaKnown RBP9.13□□□□□ -0.95
YBX3-206ENST00000536823 TMEM259Q4ZIN3 620 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 C9orf131Q5VYM1 1079 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 STYK1Q6J9G0 422 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 TPTE2Q6XPS3 522 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 RNF135Q8IUD6 432 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 PGBD3Q8N328 593 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 ZNF622Q969S3 477 aaKnown RBP eCLIP9.13□□□□□ -0.95
YBX3-206ENST00000536823 ABHD17AQ96GS6 310 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 ZMYND15Q9H091 742 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 MRS2Q9HD23 443 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
YBX3-206ENST00000536823 TNRC6CQ9HCJ0 1690 aaKnown RBP9.13□□□□□ -0.95
YBX3-206ENST00000536823 SLX4Q8IY92 1834 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 ANKRD36CQ5JPF3 1778 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 KLRG2A4D1S0 409 aaPredicted RBP9.12□□□□□ -0.95
YBX3-206ENST00000536823 NFKBIEO00221 500 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 PHKA2P46019 1235 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 GNAI1P63096 354 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 HDGFL1Q5TGJ6 251 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 ZNF526Q8TF50 670 aaPredicted RBP9.12□□□□□ -0.95
YBX3-206ENST00000536823 CNKSR1Q969H4 720 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 MASTLQ96GX5 879 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 NYXQ9GZU5 481 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 RUBCNLQ9H714 662 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 DDX21Q9NR30 783 aaKnown RBP eCLIP9.12□□□□□ -0.95
YBX3-206ENST00000536823 RNF181Q9P0P0 153 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 CACNA1SQ13698 1873 aa9.12□□□□□ -0.95
YBX3-206ENST00000536823 FER1L6Q2WGJ9 1857 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 KRTAP4-8A0A0G2JLE6 195 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 FAM177BA6PVY3 158 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 AP1G2O75843 785 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 NPR1P16066 1061 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 GPTP24298 496 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 C1QTNF8P60827 252 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 CTBSQ01459 385 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 PARP10Q53GL7 1025 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 EFHC2Q5JST6 749 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 DUSP27Q5VZP5 1158 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 PRPF40BQ6NWY9 871 aaKnown RBP9.11□□□□□ -0.95
YBX3-206ENST00000536823 CHSY3Q70JA7 882 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 ZNF34Q8IZ26 560 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 XAGE3Q8WTP9 111 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 CHPF2Q9P2E5 772 aa9.11□□□□□ -0.95
YBX3-206ENST00000536823 LTBP3Q9NS15 1303 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 NEURL1BA8MQ27 555 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 C21orf2O43822 256 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 NTSR2O95665 410 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 ARAFP10398 606 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 LMNB1P20700 586 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 GTF2E1P29083 439 aaPredicted RBP9.1□□□□□ -0.95
YBX3-206ENST00000536823 CCDC27Q2M243 656 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 CRY2Q49AN0 593 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 NKAPLQ5M9Q1 402 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 COPS6Q7L5N1 327 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 KRTAP19-1Q8IUB9 90 aa9.1□□□□□ -0.95
YBX3-206ENST00000536823 HMX1Q9NP08 348 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms