RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 NAA16Q6N069 864 aaPredicted RBP23.22■■□□□ 1.31
LRRK1-210ENST00000534045 MS4A4AQ96JQ5 239 aa23.22■■□□□ 1.31
LRRK1-210ENST00000534045 BCL11AQ9H165 835 aa23.22■■□□□ 1.31
LRRK1-210ENST00000534045 R3HDMLQ9H3Y0 253 aa23.22■■□□□ 1.31
LRRK1-210ENST00000534045 PPATQ06203 517 aa23.21■■□□□ 1.31
LRRK1-210ENST00000534045 AACSQ86V21 672 aa23.21■■□□□ 1.31
LRRK1-210ENST00000534045 EAF2Q96CJ1 260 aaPredicted RBP23.21■■□□□ 1.31
LRRK1-210ENST00000534045 ZNF512BQ96KM6 892 aaPredicted RBP23.21■■□□□ 1.31
LRRK1-210ENST00000534045 PTPN18Q99952 460 aa23.21■■□□□ 1.31
LRRK1-210ENST00000534045 ZFYVE28Q9HCC9 887 aa23.21■■□□□ 1.31
LRRK1-210ENST00000534045 DOCK2Q92608 1830 aa23.21■■□□□ 1.31
LRRK1-210ENST00000534045 APBB1O00213 710 aa23.2■■□□□ 1.3
LRRK1-210ENST00000534045 CRHR2Q13324 411 aa23.2■■□□□ 1.3
LRRK1-210ENST00000534045 PPIL2Q13356 520 aa23.2■■□□□ 1.3
LRRK1-210ENST00000534045 TAF1CQ15572 869 aaPredicted RBP23.2■■□□□ 1.3
LRRK1-210ENST00000534045 BRI3BPQ8WY22 251 aa23.2■■□□□ 1.3
LRRK1-210ENST00000534045 ZNF112Q9UJU3 913 aa23.2■■□□□ 1.3
LRRK1-210ENST00000534045 DBNLQ9UJU6 430 aaKnown RBP23.2■■□□□ 1.3
LRRK1-210ENST00000534045 IRF6O14896 467 aa23.19■■□□□ 1.3
LRRK1-210ENST00000534045 PICK1Q9NRD5 415 aa23.19■■□□□ 1.3
LRRK1-210ENST00000534045 ZBTB40Q9NUA8 1239 aa23.19■■□□□ 1.3
LRRK1-210ENST00000534045 MAST2Q6P0Q8 1798 aa23.19■■□□□ 1.3
LRRK1-210ENST00000534045 PLCG2P16885 1265 aa23.18■■□□□ 1.3
LRRK1-210ENST00000534045 ZAP70P43403 619 aa23.18■■□□□ 1.3
LRRK1-210ENST00000534045 PDE3AQ14432 1141 aa23.18■■□□□ 1.3
LRRK1-210ENST00000534045 TEX11Q8IYF3 940 aa23.18■■□□□ 1.3
LRRK1-210ENST00000534045 CLASRPQ8N2M8 674 aaKnown RBP23.18■■□□□ 1.3
LRRK1-210ENST00000534045 ERO1AQ96HE7 468 aa23.18■■□□□ 1.3
LRRK1-210ENST00000534045 IGSF3O75054 1194 aa23.17■■□□□ 1.3
LRRK1-210ENST00000534045 CYP2E1P05181 493 aaPredicted RBP23.17■■□□□ 1.3
LRRK1-210ENST00000534045 RHBDL3P58872 404 aa23.17■■□□□ 1.3
LRRK1-210ENST00000534045 ARHGEF6Q15052 776 aa23.17■■□□□ 1.3
LRRK1-210ENST00000534045 RHPN1Q8TCX5 695 aa23.17■■□□□ 1.3
LRRK1-210ENST00000534045 ZNF384Q8TF68 577 aa23.17■■□□□ 1.3
LRRK1-210ENST00000534045 KIF1BPQ96EK5 621 aa23.17■■□□□ 1.3
LRRK1-210ENST00000534045 IL1RAPL2Q9NP60 686 aa23.17■■□□□ 1.3
LRRK1-210ENST00000534045 DDX4Q9NQI0 724 aaKnown RBP23.17■■□□□ 1.3
LRRK1-210ENST00000534045 TLR7Q9NYK1 1049 aaKnown RBP23.17■■□□□ 1.3
LRRK1-210ENST00000534045 DDTLA6NHG4 134 aaPredicted RBP23.16■■□□□ 1.3
LRRK1-210ENST00000534045 NPM3O75607 178 aaKnown RBP23.16■■□□□ 1.3
LRRK1-210ENST00000534045 IDH1O75874 414 aaKnown RBP23.16■■□□□ 1.3
LRRK1-210ENST00000534045 SP3Q02447 781 aa23.16■■□□□ 1.3
LRRK1-210ENST00000534045 AATFQ9NY61 560 aaKnown RBP eCLIP23.16■■□□□ 1.3
LRRK1-210ENST00000534045 TRIM17Q9Y577 477 aa23.16■■□□□ 1.3
LRRK1-210ENST00000534045 RAB11FIP3O75154 756 aa23.15■■□□□ 1.3
LRRK1-210ENST00000534045 IFIT2P09913 472 aaKnown RBP23.15■■□□□ 1.3
LRRK1-210ENST00000534045 NOL9Q5SY16 702 aaKnown RBP23.15■■□□□ 1.3
LRRK1-210ENST00000534045 FBXO46Q6PJ61 603 aaPredicted RBP23.15■■□□□ 1.3
LRRK1-210ENST00000534045 SH3BP5LQ7L8J4 393 aa23.15■■□□□ 1.3
LRRK1-210ENST00000534045 FAM43AQ8N2R8 423 aa23.15■■□□□ 1.3
LRRK1-210ENST00000534045 SCYL3Q8IZE3 742 aa23.14■■□□□ 1.29
LRRK1-210ENST00000534045 SH3RF3Q8TEJ3 882 aaPredicted RBP23.14■■□□□ 1.29
LRRK1-210ENST00000534045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.14■■□□□ 1.29
LRRK1-210ENST00000534045 HPS5Q9UPZ3 1129 aa23.14■■□□□ 1.29
LRRK1-210ENST00000534045 ZHX2Q9Y6X8 837 aa23.14■■□□□ 1.29
LRRK1-210ENST00000534045 MYO5AQ9Y4I1 1855 aaKnown RBP23.13■■□□□ 1.29
LRRK1-210ENST00000534045 BTBD19C9JJ37 291 aa23.13■■□□□ 1.29
LRRK1-210ENST00000534045 CTNND1O60716 968 aaKnown RBP23.13■■□□□ 1.29
LRRK1-210ENST00000534045 CYP7A1P22680 504 aa23.13■■□□□ 1.29
LRRK1-210ENST00000534045 MAP3K12Q12852 859 aa23.13■■□□□ 1.29
LRRK1-210ENST00000534045 OSBPL5Q9H0X9 879 aaPredicted RBP23.13■■□□□ 1.29
LRRK1-210ENST00000534045 ZCCHC17Q9NP64 241 aaKnown RBP23.13■■□□□ 1.29
LRRK1-210ENST00000534045 PHF20L1A8MW92 1017 aa23.12■■□□□ 1.29
LRRK1-210ENST00000534045 CXCL11O14625 94 aa23.12■■□□□ 1.29
LRRK1-210ENST00000534045 PPP4CP60510 307 aa23.12■■□□□ 1.29
LRRK1-210ENST00000534045 KIF22Q14807 665 aa23.12■■□□□ 1.29
LRRK1-210ENST00000534045 TRIM34Q9BYJ4 488 aa23.12■■□□□ 1.29
LRRK1-210ENST00000534045 EFCC1Q9HA90 598 aa23.12■■□□□ 1.29
LRRK1-210ENST00000534045 PIH1D3Q9NQM4 214 aaKnown RBP23.12■■□□□ 1.29
LRRK1-210ENST00000534045 TBC1D12O60347 775 aa23.11■■□□□ 1.29
LRRK1-210ENST00000534045 MAP3K10Q02779 954 aa23.11■■□□□ 1.29
LRRK1-210ENST00000534045 MLLT1Q03111 559 aaPredicted RBP23.11■■□□□ 1.29
LRRK1-210ENST00000534045 TTF1Q15361 905 aaPredicted RBP23.11■■□□□ 1.29
LRRK1-210ENST00000534045 C20orf194Q5TEA3 1177 aa23.11■■□□□ 1.29
LRRK1-210ENST00000534045 CD99L2Q8TCZ2 262 aa23.11■■□□□ 1.29
LRRK1-210ENST00000534045 TGFBRAP1Q8WUH2 860 aa23.11■■□□□ 1.29
LRRK1-210ENST00000534045 DHX36Q9H2U1 1008 aaKnown RBP23.11■■□□□ 1.29
LRRK1-210ENST00000534045 KCNH4Q9UQ05 1017 aa23.11■■□□□ 1.29
LRRK1-210ENST00000534045 FASTKD5Q7L8L6 764 aaKnown RBP23.1■■□□□ 1.29
LRRK1-210ENST00000534045 SIRT2Q8IXJ6 389 aa23.1■■□□□ 1.29
LRRK1-210ENST00000534045 PI4KBQ9UBF8 816 aa23.1■■□□□ 1.29
LRRK1-210ENST00000534045 PDHXO00330 501 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 TLR2O60603 784 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 PTPRAP18433 802 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 OTOP1Q7RTM1 612 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 ANKRD23Q86SG2 305 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 CERS3Q8IU89 383 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 MAPKAPK5Q8IW41 473 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 MAGEB6Q8N7X4 407 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 NDUFB9Q9Y6M9 179 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 RFX7Q2KHR2 1363 aa23.09■■□□□ 1.29
LRRK1-210ENST00000534045 TMED8Q6PL24 325 aaPredicted RBP23.08■■□□□ 1.29
LRRK1-210ENST00000534045 CRACR2BQ8N4Y2 399 aaPredicted RBP23.08■■□□□ 1.29
LRRK1-210ENST00000534045 HERC5Q9UII4 1024 aaKnown RBP23.08■■□□□ 1.29
LRRK1-210ENST00000534045 ATRNL1Q5VV63 1379 aa23.08■■□□□ 1.29
LRRK1-210ENST00000534045 CDK5RAP2Q96SN8 1893 aa23.08■■□□□ 1.29
LRRK1-210ENST00000534045 USP5P45974 858 aa23.07■■□□□ 1.28
LRRK1-210ENST00000534045 SOX10P56693 466 aa23.07■■□□□ 1.28
LRRK1-210ENST00000534045 ADGRA1Q86SQ6 560 aa23.07■■□□□ 1.28
LRRK1-210ENST00000534045 MIGA1Q8NAN2 632 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms