RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 STOX1Q6ZVD7 989 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 NECAB1Q8N987 351 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 ZNF296Q8WUU4 475 aaPredicted RBP11.37□□□□□ -0.59
CHKA-207ENST00000533728 FOXD4L4Q8WXT5 416 aaPredicted RBP11.37□□□□□ -0.59
CHKA-207ENST00000533728 CDC5LQ99459 802 aaKnown RBP11.37□□□□□ -0.59
CHKA-207ENST00000533728 PANK2Q9BZ23 570 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 SRP68Q9UHB9 627 aaKnown RBP11.37□□□□□ -0.59
CHKA-207ENST00000533728 TBC1D2BQ9UPU7 963 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 TAF6LQ9Y6J9 622 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 NDUFB9Q9Y6M9 179 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 MYH6P13533 1939 aa11.37□□□□□ -0.59
CHKA-207ENST00000533728 IGSF3O75054 1194 aa11.36□□□□□ -0.59
CHKA-207ENST00000533728 ZPR1O75312 459 aa11.36□□□□□ -0.59
CHKA-207ENST00000533728 SUSD4Q5VX71 490 aa11.36□□□□□ -0.59
CHKA-207ENST00000533728 TMED8Q6PL24 325 aaPredicted RBP11.36□□□□□ -0.59
CHKA-207ENST00000533728 DEFB123Q8N688 67 aa11.36□□□□□ -0.59
CHKA-207ENST00000533728 ZNF408Q9H9D4 720 aa11.36□□□□□ -0.59
CHKA-207ENST00000533728 CNPY2Q9Y2B0 182 aa11.36□□□□□ -0.59
CHKA-207ENST00000533728 EYSQ5T1H1 3165 aa11.36□□□□□ -0.59
CHKA-207ENST00000533728 VPS37CA5D8V6 355 aaPredicted RBP11.35□□□□□ -0.59
CHKA-207ENST00000533728 FAM155AB1AL88 458 aaPredicted RBP11.35□□□□□ -0.59
CHKA-207ENST00000533728 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
CHKA-207ENST00000533728 MCM5P33992 734 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 IGHMBP2P38935 993 aaKnown RBP11.35□□□□□ -0.59
CHKA-207ENST00000533728 HUNKP57058 714 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 FGD1P98174 961 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 MAPK8IP2Q13387 824 aaPredicted RBP11.35□□□□□ -0.59
CHKA-207ENST00000533728 SCARF1Q14162 830 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 SF3B3Q15393 1217 aaKnown RBP11.35□□□□□ -0.59
CHKA-207ENST00000533728 SLC10A5Q5PT55 438 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 CCDC102BQ68D86 513 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 NCOA7Q8NI08 942 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 PDLIM2Q96JY6 352 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 MPHOSPH8Q99549 860 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 LARP6Q9BRS8 491 aaKnown RBP11.35□□□□□ -0.59
CHKA-207ENST00000533728 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 PRO3102Q9H379 93 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 TSPY26PQ9H489 355 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 NSFL1CQ9UNZ2 370 aaKnown RBP11.35□□□□□ -0.59
CHKA-207ENST00000533728 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
CHKA-207ENST00000533728 SYCE3A1L190 88 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 FOXP2O15409 715 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 GPAA1O43292 621 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
CHKA-207ENST00000533728 FGAP02671 866 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 MB21D2Q8IYB1 491 aaPredicted RBP11.34□□□□□ -0.59
CHKA-207ENST00000533728 GPC2Q8N158 579 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
CHKA-207ENST00000533728 BRF1Q92994 677 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 ZNF622Q969S3 477 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHKA-207ENST00000533728 RBSNQ9H1K0 784 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 TAF1P21675 1872 aa11.34□□□□□ -0.59
CHKA-207ENST00000533728 LAMB1P07942 1786 aa11.33□□□□□ -0.59
CHKA-207ENST00000533728 SLX4Q8IY92 1834 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 COL11A2P13942 1736 aaPredicted RBP11.33□□□□□ -0.6
CHKA-207ENST00000533728 TCRBV5S4A2TA0A5A2 114 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 GADD45BO75293 160 aaPredicted RBP11.33□□□□□ -0.6
CHKA-207ENST00000533728 CHGBP05060 677 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 GNAT2P19087 354 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 DNM1Q05193 864 aaKnown RBP11.33□□□□□ -0.6
CHKA-207ENST00000533728 SCRN1Q12765 414 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 MAP3K12Q12852 859 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 RESTQ13127 1097 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 NFIXQ14938 502 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 CDC37L1Q7L3B6 337 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 TRIM44Q96DX7 344 aaPredicted RBP11.33□□□□□ -0.6
CHKA-207ENST00000533728 CFAP45Q9UL16 551 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 NIP7Q9Y221 180 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHKA-207ENST00000533728 PDS5AQ29RF7 1337 aaKnown RBP11.33□□□□□ -0.6
CHKA-207ENST00000533728 SYNGAP1Q96PV0 1343 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 MUC6Q6W4X9 2439 aa11.33□□□□□ -0.6
CHKA-207ENST00000533728 BDP1A6H8Y1 2624 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 TMEM265A0A087WTH1 108 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 ZNF213O14771 459 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 PDE6AP16499 860 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 PDIA3P30101 505 aaKnown RBP11.32□□□□□ -0.6
CHKA-207ENST00000533728 PHKA1P46020 1223 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 COL9A3Q14050 684 aaPredicted RBP11.32□□□□□ -0.6
CHKA-207ENST00000533728 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 RGMBQ6NW40 437 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 USP50Q70EL3 339 aaPredicted RBP11.32□□□□□ -0.6
CHKA-207ENST00000533728 SPATA5Q8NB90 893 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 CCDC102AQ96A19 550 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 CHAMP1Q96JM3 812 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 TMEM87BQ96K49 555 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 TCEANC2Q96MN5 208 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
CHKA-207ENST00000533728 CSRNP1Q96S65 589 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 NYXQ9GZU5 481 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 PUS7LQ9H0K6 701 aaKnown RBP11.32□□□□□ -0.6
CHKA-207ENST00000533728 ZNF804BA4D1E1 1349 aa11.32□□□□□ -0.6
CHKA-207ENST00000533728 NID2Q14112 1375 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 A0A1W2PPC1 479 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 H3BQV1 296 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 FIBPO43427 364 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 CLCN1P35523 988 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 TRDNQ13061 729 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 SLC9C2Q5TAH2 1124 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 TBC1D9BQ66K14 1250 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms