RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 BCAMP50895 628 aa9.85□□□□□ -0.83
NXF1-215ENST00000533440 NFIAQ12857 509 aa9.85□□□□□ -0.83
NXF1-215ENST00000533440 SUCLG2Q96I99 432 aa9.85□□□□□ -0.83
NXF1-215ENST00000533440 C9orf78Q9NZ63 289 aaPredicted RBP9.85□□□□□ -0.83
NXF1-215ENST00000533440 ATRNL1Q5VV63 1379 aa9.85□□□□□ -0.83
NXF1-215ENST00000533440 KIF16BQ96L93 1317 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 DOCK3Q8IZD9 2030 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 ALDH1L1O75891 902 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 TCP10Q12799 353 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 RABL6Q3YEC7 729 aaPredicted RBP9.84□□□□□ -0.83
NXF1-215ENST00000533440 LRRC24Q50LG9 513 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 CDC42EP5Q6NZY7 148 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 C7orf61Q8IZ16 206 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 TDHQ8IZJ6 230 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.84□□□□□ -0.83
NXF1-215ENST00000533440 FAM198AQ9UFP1 575 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 ZMYND8Q9ULU4 1186 aaPredicted RBP9.84□□□□□ -0.83
NXF1-215ENST00000533440 DAGLAQ9Y4D2 1042 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 AFG3L2Q9Y4W6 797 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 ZHX2Q9Y6X8 837 aa9.84□□□□□ -0.83
NXF1-215ENST00000533440 FANCIQ9NVI1 1328 aa9.83□□□□□ -0.84
NXF1-215ENST00000533440 LAMA2P24043 3122 aaKnown RBP9.83□□□□□ -0.84
NXF1-215ENST00000533440 PTPRAP18433 802 aa9.83□□□□□ -0.84
NXF1-215ENST00000533440 FGFR2P21802 821 aa9.83□□□□□ -0.84
NXF1-215ENST00000533440 MAGEA10P43363 369 aaPredicted RBP9.83□□□□□ -0.84
NXF1-215ENST00000533440 MAP3K10Q02779 954 aa9.83□□□□□ -0.84
NXF1-215ENST00000533440 METTL24Q5JXM2 366 aa9.83□□□□□ -0.84
NXF1-215ENST00000533440 SCYL3Q8IZE3 742 aa9.83□□□□□ -0.84
NXF1-215ENST00000533440 COA7Q96BR5 231 aa9.83□□□□□ -0.84
NXF1-215ENST00000533440 NBPF3Q9H094 633 aa9.83□□□□□ -0.84
NXF1-215ENST00000533440 UTYO14607 1347 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 EYSQ5T1H1 3165 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 PTPRFP10586 1907 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 AK9Q5TCS8 1911 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 NBPF7P0C2Y1 421 aaPredicted RBP9.82□□□□□ -0.84
NXF1-215ENST00000533440 SYN1P17600 705 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 DIXDC1Q155Q3 683 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 FAM110CQ1W6H9 321 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 GADL1Q6ZQY3 521 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 ZFPM1Q8IX07 1006 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 WDR66Q8TBY9 1149 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 SMCR8Q8TEV9 937 aaPredicted RBP9.82□□□□□ -0.84
NXF1-215ENST00000533440 SRCIN1Q9C0H9 1055 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 RPTORQ8N122 1335 aa9.82□□□□□ -0.84
NXF1-215ENST00000533440 HMGCRP04035 888 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 IFIT1P09914 478 aaKnown RBP9.81□□□□□ -0.84
NXF1-215ENST00000533440 EXOSC9Q06265 439 aaKnown RBP9.81□□□□□ -0.84
NXF1-215ENST00000533440 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.81□□□□□ -0.84
NXF1-215ENST00000533440 ANKRD13CQ8N6S4 541 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 ANKRD44Q8N8A2 993 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 IDI2Q9BXS1 227 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 BICC1Q9H694 974 aaKnown RBP9.81□□□□□ -0.84
NXF1-215ENST00000533440 C11orf49Q9H6J7 331 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 PICK1Q9NRD5 415 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 USP40Q9NVE5 1235 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 GJD2Q9UKL4 321 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 OGDHLQ9ULD0 1010 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 AGTPBP1Q9UPW5 1226 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 PHIPQ8WWQ0 1821 aa9.81□□□□□ -0.84
NXF1-215ENST00000533440 DOCK2Q92608 1830 aa9.8□□□□□ -0.84
NXF1-215ENST00000533440 RFX7Q2KHR2 1363 aa9.8□□□□□ -0.84
NXF1-215ENST00000533440 DDX60LQ5H9U9 1706 aaKnown RBP9.8□□□□□ -0.84
NXF1-215ENST00000533440 POTEB2H3BUK9 544 aa9.8□□□□□ -0.84
NXF1-215ENST00000533440 ENTPD3O75355 529 aa9.8□□□□□ -0.84
NXF1-215ENST00000533440 PRDX5P30044 214 aa9.8□□□□□ -0.84
NXF1-215ENST00000533440 TRIM32Q13049 653 aa9.8□□□□□ -0.84
NXF1-215ENST00000533440 PUM3Q15397 648 aaKnown RBP9.8□□□□□ -0.84
NXF1-215ENST00000533440 FAM109BQ6ICB4 259 aaPredicted RBP9.8□□□□□ -0.84
NXF1-215ENST00000533440 SH3BP5LQ7L8J4 393 aa9.8□□□□□ -0.84
NXF1-215ENST00000533440 UBE2OQ9C0C9 1292 aaKnown RBP9.8□□□□□ -0.84
NXF1-215ENST00000533440 HMX1Q9NP08 348 aaPredicted RBP9.8□□□□□ -0.84
NXF1-215ENST00000533440 PFASO15067 1338 aa9.8□□□□□ -0.84
NXF1-215ENST00000533440 COL2A1P02458 1487 aaPredicted RBP9.79□□□□□ -0.84
NXF1-215ENST00000533440 CDH23Q9H251 3354 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 CTNND1O60716 968 aaKnown RBP9.79□□□□□ -0.84
NXF1-215ENST00000533440 ZEB1P37275 1124 aaPredicted RBP9.79□□□□□ -0.84
NXF1-215ENST00000533440 RGS3P49796 1198 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 TREML2Q5T2D2 321 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 SLC4A10Q6U841 1118 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 WDR63Q8IWG1 891 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 PROCA1Q8NCQ7 364 aaPredicted RBP9.79□□□□□ -0.84
NXF1-215ENST00000533440 KLHDC4Q8TBB5 520 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 LPIN2Q92539 896 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 GUCD1Q96NT3 240 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 LRRFIP2Q9Y608 721 aaKnown RBP9.79□□□□□ -0.84
NXF1-215ENST00000533440 MUC3AQ02505 3323 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 MYH13Q9UKX3 1938 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 SALL1Q9NSC2 1324 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 DOCK1Q14185 1865 aa9.79□□□□□ -0.84
NXF1-215ENST00000533440 DDTLA6NHG4 134 aaPredicted RBP9.78□□□□□ -0.84
NXF1-215ENST00000533440 TRIM75PA6NK02 468 aa9.78□□□□□ -0.84
NXF1-215ENST00000533440 LDHBP07195 334 aaKnown RBP9.78□□□□□ -0.84
NXF1-215ENST00000533440 SLURP2P0DP57 97 aa9.78□□□□□ -0.84
NXF1-215ENST00000533440 COL6A1P12109 1028 aa9.78□□□□□ -0.84
NXF1-215ENST00000533440 SLC5A1P13866 664 aa9.78□□□□□ -0.84
NXF1-215ENST00000533440 GCLCP48506 637 aaPredicted RBP9.78□□□□□ -0.84
NXF1-215ENST00000533440 CACNB1Q02641 598 aaPredicted RBP9.78□□□□□ -0.84
NXF1-215ENST00000533440 MAP3K21Q5TCX8 1036 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms