RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 ATRNL1Q5VV63 1379 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 IRF6O14896 467 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 INPP5BP32019 993 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 RHBDL3P58872 404 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 ERC1Q8IUD2 1116 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 ZFPM1Q8IX07 1006 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 CHMP4BQ9H444 224 aaKnown RBP28.77■■■□□ 2.2
SMPD1-209ENST00000533196 ZFYVE28Q9HCC9 887 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 LRP2BPQ9P2M1 347 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 DDX19BQ9UMR2 479 aa28.77■■■□□ 2.2
SMPD1-209ENST00000533196 MAP3K10Q02779 954 aa28.76■■■□□ 2.19
SMPD1-209ENST00000533196 HSP90AB4PQ58FF6 505 aa28.76■■■□□ 2.19
SMPD1-209ENST00000533196 HPS5Q9UPZ3 1129 aa28.76■■■□□ 2.19
SMPD1-209ENST00000533196 MAST2Q6P0Q8 1798 aa28.75■■■□□ 2.19
SMPD1-209ENST00000533196 TAF1CQ15572 869 aaPredicted RBP28.75■■■□□ 2.19
SMPD1-209ENST00000533196 ZSCAN29Q8IWY8 852 aaPredicted RBP28.75■■■□□ 2.19
SMPD1-209ENST00000533196 SP3Q02447 781 aa28.74■■■□□ 2.19
SMPD1-209ENST00000533196 RPAP2Q8IXW5 612 aaPredicted RBP28.74■■■□□ 2.19
SMPD1-209ENST00000533196 FAM43AQ8N2R8 423 aa28.74■■■□□ 2.19
SMPD1-209ENST00000533196 DDX4Q9NQI0 724 aaKnown RBP28.74■■■□□ 2.19
SMPD1-209ENST00000533196 DBNLQ9UJU6 430 aaKnown RBP28.74■■■□□ 2.19
SMPD1-209ENST00000533196 RCAN3Q9UKA8 241 aa28.74■■■□□ 2.19
SMPD1-209ENST00000533196 KCNH4Q9UQ05 1017 aa28.74■■■□□ 2.19
SMPD1-209ENST00000533196 COL2A1P02458 1487 aaPredicted RBP28.73■■■□□ 2.19
SMPD1-209ENST00000533196 MLLT1Q03111 559 aaPredicted RBP28.73■■■□□ 2.19
SMPD1-209ENST00000533196 SH3BP5LQ7L8J4 393 aa28.73■■■□□ 2.19
SMPD1-209ENST00000533196 NOL10Q9BSC4 688 aaKnown RBP28.73■■■□□ 2.19
SMPD1-209ENST00000533196 DDTLA6NHG4 134 aaPredicted RBP28.72■■■□□ 2.19
SMPD1-209ENST00000533196 PHF20L1A8MW92 1017 aa28.72■■■□□ 2.19
SMPD1-209ENST00000533196 PICALMQ13492 652 aa28.72■■■□□ 2.19
SMPD1-209ENST00000533196 EAF2Q96CJ1 260 aaPredicted RBP28.72■■■□□ 2.19
SMPD1-209ENST00000533196 TRIM17Q9Y577 477 aa28.72■■■□□ 2.19
SMPD1-209ENST00000533196 TBC1D12O60347 775 aa28.71■■■□□ 2.19
SMPD1-209ENST00000533196 ARHGEF6Q15052 776 aa28.71■■■□□ 2.19
SMPD1-209ENST00000533196 SCYL3Q8IZE3 742 aa28.71■■■□□ 2.19
SMPD1-209ENST00000533196 SNRKQ9NRH2 765 aa28.71■■■□□ 2.19
SMPD1-209ENST00000533196 BTBD19C9JJ37 291 aa28.7■■■□□ 2.18
SMPD1-209ENST00000533196 HMMRO75330 724 aa28.7■■■□□ 2.18
SMPD1-209ENST00000533196 BAG3O95817 575 aa28.7■■■□□ 2.18
SMPD1-209ENST00000533196 CYP2E1P05181 493 aaPredicted RBP28.7■■■□□ 2.18
SMPD1-209ENST00000533196 NAA16Q6N069 864 aaPredicted RBP28.7■■■□□ 2.18
SMPD1-209ENST00000533196 OTOP1Q7RTM1 612 aa28.7■■■□□ 2.18
SMPD1-209ENST00000533196 ZBTB40Q9NUA8 1239 aa28.7■■■□□ 2.18
SMPD1-209ENST00000533196 CXCL11O14625 94 aa28.69■■■□□ 2.18
SMPD1-209ENST00000533196 PLCG2P16885 1265 aa28.69■■■□□ 2.18
SMPD1-209ENST00000533196 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.69■■■□□ 2.18
SMPD1-209ENST00000533196 CCDC8Q9H0W5 538 aaPredicted RBP28.69■■■□□ 2.18
SMPD1-209ENST00000533196 EXOC6BQ9Y2D4 811 aa28.69■■■□□ 2.18
SMPD1-209ENST00000533196 COG6Q9Y2V7 657 aa28.69■■■□□ 2.18
SMPD1-209ENST00000533196 MYO5AQ9Y4I1 1855 aaKnown RBP28.69■■■□□ 2.18
SMPD1-209ENST00000533196 TLR2O60603 784 aa28.68■■■□□ 2.18
SMPD1-209ENST00000533196 CTNND1O60716 968 aaKnown RBP28.68■■■□□ 2.18
SMPD1-209ENST00000533196 PPP4CP60510 307 aa28.68■■■□□ 2.18
SMPD1-209ENST00000533196 ANKRD23Q86SG2 305 aa28.68■■■□□ 2.18
SMPD1-209ENST00000533196 CD99L2Q8TCZ2 262 aa28.68■■■□□ 2.18
SMPD1-209ENST00000533196 PICK1Q9NRD5 415 aa28.68■■■□□ 2.18
SMPD1-209ENST00000533196 DOCK1Q14185 1865 aa28.68■■■□□ 2.18
SMPD1-209ENST00000533196 ZAP70P43403 619 aa28.67■■■□□ 2.18
SMPD1-209ENST00000533196 TMED8Q6PL24 325 aaPredicted RBP28.67■■■□□ 2.18
SMPD1-209ENST00000533196 TEX11Q8IYF3 940 aa28.67■■■□□ 2.18
SMPD1-209ENST00000533196 OSBPL5Q9H0X9 879 aaPredicted RBP28.67■■■□□ 2.18
SMPD1-209ENST00000533196 EFCC1Q9HA90 598 aa28.67■■■□□ 2.18
SMPD1-209ENST00000533196 TLR7Q9NYK1 1049 aaKnown RBP28.67■■■□□ 2.18
SMPD1-209ENST00000533196 PDE3AQ14432 1141 aa28.65■■■□□ 2.18
SMPD1-209ENST00000533196 AACSQ86V21 672 aa28.65■■■□□ 2.18
SMPD1-209ENST00000533196 RHPN1Q8TCX5 695 aa28.65■■■□□ 2.18
SMPD1-209ENST00000533196 PTPN22Q9Y2R2 807 aa28.65■■■□□ 2.18
SMPD1-209ENST00000533196 FOCADQ5VW36 1801 aa28.64■■■□□ 2.18
SMPD1-209ENST00000533196 PTPRAP18433 802 aa28.64■■■□□ 2.18
SMPD1-209ENST00000533196 DHX36Q9H2U1 1008 aaKnown RBP28.64■■■□□ 2.18
SMPD1-209ENST00000533196 AATFQ9NY61 560 aaKnown RBP eCLIP28.64■■■□□ 2.18
SMPD1-209ENST00000533196 CDK5RAP2Q96SN8 1893 aa28.63■■■□□ 2.17
SMPD1-209ENST00000533196 SOX10P56693 466 aa28.63■■■□□ 2.17
SMPD1-209ENST00000533196 CERS3Q8IU89 383 aa28.63■■■□□ 2.17
SMPD1-209ENST00000533196 SH3RF3Q8TEJ3 882 aaPredicted RBP28.63■■■□□ 2.17
SMPD1-209ENST00000533196 KIF1BPQ96EK5 621 aa28.63■■■□□ 2.17
SMPD1-209ENST00000533196 PIH1D3Q9NQM4 214 aaKnown RBP28.63■■■□□ 2.17
SMPD1-209ENST00000533196 ZHX2Q9Y6X8 837 aa28.63■■■□□ 2.17
SMPD1-209ENST00000533196 PHIPQ8WWQ0 1821 aa28.62■■■□□ 2.17
SMPD1-209ENST00000533196 MOGSQ13724 837 aa28.62■■■□□ 2.17
SMPD1-209ENST00000533196 FASTKD5Q7L8L6 764 aaKnown RBP28.62■■■□□ 2.17
SMPD1-209ENST00000533196 CLASRPQ8N2M8 674 aaKnown RBP28.62■■■□□ 2.17
SMPD1-209ENST00000533196 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.62■■■□□ 2.17
SMPD1-209ENST00000533196 HERC5Q9UII4 1024 aaKnown RBP28.62■■■□□ 2.17
SMPD1-209ENST00000533196 PTPRFP10586 1907 aa28.62■■■□□ 2.17
SMPD1-209ENST00000533196 PDHXO00330 501 aa28.61■■■□□ 2.17
SMPD1-209ENST00000533196 RAB11FIP3O75154 756 aa28.61■■■□□ 2.17
SMPD1-209ENST00000533196 KIF22Q14807 665 aa28.61■■■□□ 2.17
SMPD1-209ENST00000533196 AFG3L2Q9Y4W6 797 aa28.61■■■□□ 2.17
SMPD1-209ENST00000533196 A0A0G2JLL6 359 aaPredicted RBP28.6■■■□□ 2.17
SMPD1-209ENST00000533196 GNRH1P01148 92 aa28.6■■■□□ 2.17
SMPD1-209ENST00000533196 PRRT2Q7Z6L0 340 aaPredicted RBP28.6■■■□□ 2.17
SMPD1-209ENST00000533196 SIRT2Q8IXJ6 389 aa28.6■■■□□ 2.17
SMPD1-209ENST00000533196 TBC1D2Q9BYX2 928 aa28.6■■■□□ 2.17
SMPD1-209ENST00000533196 IL1RAPL2Q9NP60 686 aa28.6■■■□□ 2.17
SMPD1-209ENST00000533196 PI4KBQ9UBF8 816 aa28.6■■■□□ 2.17
SMPD1-209ENST00000533196 C17orf99Q6UX52 265 aa28.59■■■□□ 2.17
SMPD1-209ENST00000533196 ADGRA1Q86SQ6 560 aa28.59■■■□□ 2.17
SMPD1-209ENST00000533196 ATAD5Q96QE3 1844 aa28.58■■■□□ 2.17
SMPD1-209ENST00000533196 IDH1O75874 414 aaKnown RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms