RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ZNF408Q9H9D4 720 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 DDX4Q9NQI0 724 aaKnown RBP13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 ATP8A2Q9NTI2 1148 aa13.49□□□□□ -0.25
TRAPPC4-211ENST00000533012 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 PASKQ96RG2 1323 aa13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 PATL2C9JE40 543 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 PRKAB2O43741 272 aa13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 CELF2O95319 508 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 APPP05067 770 aa13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 CHMLP26374 656 aa13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 MFAP1P55081 439 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 C1QTNF8P60827 252 aa13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 NBPF12Q5TAG4 269 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 SDR42E1Q8WUS8 393 aa13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 TEPSINQ96N21 525 aa13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 DHX36Q9H2U1 1008 aaKnown RBP13.48□□□□□ -0.25
TRAPPC4-211ENST00000533012 MYH2Q9UKX2 1941 aa13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 FLT1P17948 1338 aa13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 CST9Q5W186 159 aa13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 CASC1Q6TDU7 716 aa13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 C2orf69Q8N8R5 385 aa13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 CSRNP1Q96S65 589 aa13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 DCP1AQ9NPI6 582 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 PI4KBQ9UBF8 816 aa13.47□□□□□ -0.25
TRAPPC4-211ENST00000533012 DOCK2Q92608 1830 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 MAST2Q6P0Q8 1798 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 DDTLA6NHG4 134 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 POLR3DP05423 398 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 HLA-DOAP06340 250 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 APLP1P51693 650 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 TTLL12Q14166 644 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 GIMAP6Q6P9H5 292 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 CCDC129Q6ZRS4 1044 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 SH3BP5LQ7L8J4 393 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 TTC6Q86TZ1 520 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 FOXP4Q8IVH2 680 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 AMOTL1Q8IY63 956 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 NACAP1Q9BZK3 213 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 MCM9Q9NXL9 1143 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 MKRN1Q9UHC7 482 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 PALD1Q9ULE6 856 aa13.46□□□□□ -0.25
TRAPPC4-211ENST00000533012 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 MYO5AQ9Y4I1 1855 aaKnown RBP13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 TMEM88BA6NKF7 163 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 GSG1L2A8MUP6 293 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 FKBP1BP68106 108 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 PRKG1Q13976 671 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 DCAF15Q66K64 600 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 MIGA2Q7L4E1 593 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 ARMC9Q7Z3E5 817 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 CDAN1Q8IWY9 1227 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 GBA2Q9HCG7 927 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 ATRNL1Q5VV63 1379 aa13.45□□□□□ -0.26
TRAPPC4-211ENST00000533012 CCDC171Q6TFL3 1326 aa13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 USP17L12C9JPN9 530 aa13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 USP17L21D6R901 530 aa13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 CDC45O75419 566 aa13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 TDO2P48775 406 aa13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 ZNF589Q86UQ0 364 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 IFNL3Q8IZI9 196 aa13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 TRIM34Q9BYJ4 488 aa13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
TRAPPC4-211ENST00000533012 RAD50Q92878 1312 aa13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 TBC1D12O60347 775 aa13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 USP2O75604 605 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 IREB2P48200 963 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 MAP3K10Q02779 954 aa13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 SLC4A8Q2Y0W8 1093 aa13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 VPS53Q5VIR6 699 aa13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 ZNF341Q9BYN7 854 aa13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 NAPBQ9H115 298 aa13.43□□□□□ -0.26
TRAPPC4-211ENST00000533012 MINDY4BA8MYZ0 360 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 UBE2Q2LH0YL09 131 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 SGSM2O43147 1006 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 HSPD1P10809 573 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 PLCD1P51178 756 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 ALX1Q15699 326 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 SBK1Q52WX2 424 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 C12orf60Q5U649 245 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 KIAA1211Q6ZU35 1233 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 ARPP21Q9UBL0 812 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 HERC5Q9UII4 1024 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 SERPINB13Q9UIV8 391 aa13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 ABT1Q9ULW3 272 aaKnown RBP13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 COL2A1P02458 1487 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC4-211ENST00000533012 UNCXA6NJT0 531 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 FGAP02671 866 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 HSPA6P17066 643 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 HUNKP57058 714 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 MAP3K9P80192 1104 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 MAP3K11Q16584 847 aa13.41□□□□□ -0.26
TRAPPC4-211ENST00000533012 MOB2Q70IA6 237 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms