RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 GABRQQ9UN88 632 aa21.56■■□□□ 1.04
PKP3-208ENST00000531857 ZHX2Q9Y6X8 837 aa21.56■■□□□ 1.04
PKP3-208ENST00000531857 RFX7Q2KHR2 1363 aa21.56■■□□□ 1.04
PKP3-208ENST00000531857 PTPRAP18433 802 aa21.55■■□□□ 1.04
PKP3-208ENST00000531857 GJA8P48165 433 aa21.55■■□□□ 1.04
PKP3-208ENST00000531857 CCDC102BQ68D86 513 aa21.55■■□□□ 1.04
PKP3-208ENST00000531857 DPF3Q92784 378 aa21.55■■□□□ 1.04
PKP3-208ENST00000531857 IDI2Q9BXS1 227 aa21.55■■□□□ 1.04
PKP3-208ENST00000531857 LRRFIP2Q9Y608 721 aaKnown RBP21.55■■□□□ 1.04
PKP3-208ENST00000531857 ATAD5Q96QE3 1844 aa21.55■■□□□ 1.04
PKP3-208ENST00000531857 GAKO14976 1311 aa21.55■■□□□ 1.04
PKP3-208ENST00000531857 A0A0G2JLL6 359 aaPredicted RBP21.54■■□□□ 1.04
PKP3-208ENST00000531857 ENTPD3O75355 529 aa21.54■■□□□ 1.04
PKP3-208ENST00000531857 GJB1P08034 283 aa21.54■■□□□ 1.04
PKP3-208ENST00000531857 IL15P40933 162 aaPredicted RBP21.54■■□□□ 1.04
PKP3-208ENST00000531857 FCGRTP55899 365 aa21.54■■□□□ 1.04
PKP3-208ENST00000531857 CHRDL2Q6WN34 429 aa21.54■■□□□ 1.04
PKP3-208ENST00000531857 PRRT2Q7Z6L0 340 aaPredicted RBP21.54■■□□□ 1.04
PKP3-208ENST00000531857 UBE2Q1Q7Z7E8 422 aa21.54■■□□□ 1.04
PKP3-208ENST00000531857 RNF208Q9H0X6 261 aa21.54■■□□□ 1.04
PKP3-208ENST00000531857 BIN2Q9UBW5 565 aaPredicted RBP21.54■■□□□ 1.04
PKP3-208ENST00000531857 AFG3L2Q9Y4W6 797 aa21.54■■□□□ 1.04
PKP3-208ENST00000531857 DDTLA6NHG4 134 aaPredicted RBP21.53■■□□□ 1.04
PKP3-208ENST00000531857 GADL1Q6ZQY3 521 aa21.53■■□□□ 1.04
PKP3-208ENST00000531857 ZSCAN29Q8IWY8 852 aaPredicted RBP21.53■■□□□ 1.04
PKP3-208ENST00000531857 NKX2-3Q8TAU0 364 aa21.53■■□□□ 1.04
PKP3-208ENST00000531857 DDX4Q9NQI0 724 aaKnown RBP21.53■■□□□ 1.04
PKP3-208ENST00000531857 PICK1Q9NRD5 415 aa21.53■■□□□ 1.04
PKP3-208ENST00000531857 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.53■■□□□ 1.04
PKP3-208ENST00000531857 NOB1Q9ULX3 412 aaKnown RBP21.53■■□□□ 1.04
PKP3-208ENST00000531857 TIMM10P62072 90 aa21.52■■□□□ 1.04
PKP3-208ENST00000531857 MAP3K10Q02779 954 aa21.52■■□□□ 1.04
PKP3-208ENST00000531857 RASGRF1Q13972 1273 aa21.52■■□□□ 1.04
PKP3-208ENST00000531857 FASTKD5Q7L8L6 764 aaKnown RBP21.52■■□□□ 1.04
PKP3-208ENST00000531857 COPRSQ9NQ92 184 aa21.52■■□□□ 1.04
PKP3-208ENST00000531857 ABCF2Q9UG63 623 aa21.52■■□□□ 1.04
PKP3-208ENST00000531857 SZT2Q5T011 3432 aa21.52■■□□□ 1.04
PKP3-208ENST00000531857 ZBTB22O15209 634 aa21.51■■□□□ 1.03
PKP3-208ENST00000531857 DZIP1Q86YF9 867 aaKnown RBP21.51■■□□□ 1.03
PKP3-208ENST00000531857 ZGPATQ8N5A5 531 aaKnown RBP21.51■■□□□ 1.03
PKP3-208ENST00000531857 UNC93B1Q9H1C4 597 aa21.51■■□□□ 1.03
PKP3-208ENST00000531857 RBM27Q9P2N5 1060 aaKnown RBP21.51■■□□□ 1.03
PKP3-208ENST00000531857 UBXN2AP68543 259 aa21.5■■□□□ 1.03
PKP3-208ENST00000531857 PICALMQ13492 652 aa21.5■■□□□ 1.03
PKP3-208ENST00000531857 CCDC84Q86UT8 332 aaPredicted RBP21.5■■□□□ 1.03
PKP3-208ENST00000531857 TRMT2AQ8IZ69 625 aaKnown RBP21.5■■□□□ 1.03
PKP3-208ENST00000531857 SLAIN1Q8ND83 568 aa21.5■■□□□ 1.03
PKP3-208ENST00000531857 MEIS3Q99687 375 aa21.5■■□□□ 1.03
PKP3-208ENST00000531857 ALPK3Q96L96 1907 aa21.49■■□□□ 1.03
PKP3-208ENST00000531857 TRIM75PA6NK02 468 aa21.49■■□□□ 1.03
PKP3-208ENST00000531857 ADCY3O60266 1144 aa21.49■■□□□ 1.03
PKP3-208ENST00000531857 CTNND1O60716 968 aaKnown RBP21.49■■□□□ 1.03
PKP3-208ENST00000531857 ELNP15502 786 aa21.49■■□□□ 1.03
PKP3-208ENST00000531857 BTDP43251 543 aa21.49■■□□□ 1.03
PKP3-208ENST00000531857 FLT3LGP49771 235 aa21.49■■□□□ 1.03
PKP3-208ENST00000531857 U2AF1L4Q8WU68 220 aaKnown RBP21.49■■□□□ 1.03
PKP3-208ENST00000531857 FAM163AQ96GL9 167 aaPredicted RBP21.49■■□□□ 1.03
PKP3-208ENST00000531857 RANBP2P49792 3224 aaKnown RBP21.49■■□□□ 1.03
PKP3-208ENST00000531857 LOC285556D6RIA3 1793 aa21.48■■□□□ 1.03
PKP3-208ENST00000531857 ZNF384Q8TF68 577 aa21.48■■□□□ 1.03
PKP3-208ENST00000531857 SLC45A1Q9Y2W3 748 aa21.48■■□□□ 1.03
PKP3-208ENST00000531857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.48■■□□□ 1.03
PKP3-208ENST00000531857 MROH7-TTC4A0A0A0MT08 1334 aa21.48■■□□□ 1.03
PKP3-208ENST00000531857 PDS5AQ29RF7 1337 aaKnown RBP21.48■■□□□ 1.03
PKP3-208ENST00000531857 A0A1B0GUL7 405 aa21.47■■□□□ 1.03
PKP3-208ENST00000531857 SGPL1O95470 568 aa21.47■■□□□ 1.03
PKP3-208ENST00000531857 XAGE2Q96GT9 111 aa21.47■■□□□ 1.03
PKP3-208ENST00000531857 HTATIP2Q9BUP3 242 aa21.47■■□□□ 1.03
PKP3-208ENST00000531857 FAM196BA6NMK8 535 aa21.46■■□□□ 1.03
PKP3-208ENST00000531857 TNPO2O14787 897 aaKnown RBP21.46■■□□□ 1.03
PKP3-208ENST00000531857 FARP2O94887 1054 aaPredicted RBP21.46■■□□□ 1.03
PKP3-208ENST00000531857 INHAP05111 366 aa21.46■■□□□ 1.03
PKP3-208ENST00000531857 RHBDL3P58872 404 aa21.46■■□□□ 1.03
PKP3-208ENST00000531857 MECOMQ03112 1051 aa21.46■■□□□ 1.03
PKP3-208ENST00000531857 TFCP2Q12800 502 aa21.46■■□□□ 1.03
PKP3-208ENST00000531857 SPTY2D1Q68D10 685 aaPredicted RBP21.46■■□□□ 1.03
PKP3-208ENST00000531857 SLF2Q8IX21 1173 aa21.46■■□□□ 1.03
PKP3-208ENST00000531857 SMCR8Q8TEV9 937 aaPredicted RBP21.46■■□□□ 1.03
PKP3-208ENST00000531857 API5Q9BZZ5 524 aaKnown RBP21.46■■□□□ 1.03
PKP3-208ENST00000531857 CDK5RAP2Q96SN8 1893 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 GPR75-ASB3A0A0A6YYF3 556 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 CCER2I3L3R5 266 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 TREML2Q5T2D2 321 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 ERICH6Q7L0X2 663 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 ANKRD13CQ8N6S4 541 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 PRO3102Q9H379 93 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 AGTPBP1Q9UPW5 1226 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 HDAC5Q9UQL6 1122 aa21.45■■□□□ 1.02
PKP3-208ENST00000531857 SIPA1L1O43166 1804 aa21.44■■□□□ 1.02
PKP3-208ENST00000531857 PI16Q6UXB8 463 aa21.44■■□□□ 1.02
PKP3-208ENST00000531857 PXYLP1Q8TE99 480 aa21.44■■□□□ 1.02
PKP3-208ENST00000531857 PLXNB2O15031 1838 aa21.43■■□□□ 1.02
PKP3-208ENST00000531857 ZBTB7BO15156 539 aaPredicted RBP21.43■■□□□ 1.02
PKP3-208ENST00000531857 SRGAP3O43295 1099 aa21.43■■□□□ 1.02
PKP3-208ENST00000531857 TBC1D12O60347 775 aa21.43■■□□□ 1.02
PKP3-208ENST00000531857 IRF5Q13568 498 aa21.43■■□□□ 1.02
PKP3-208ENST00000531857 TBC1D9Q6ZT07 1266 aa21.43■■□□□ 1.02
PKP3-208ENST00000531857 DEFB118Q96PH6 123 aa21.43■■□□□ 1.02
PKP3-208ENST00000531857 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.43■■□□□ 1.02
PKP3-208ENST00000531857 HMG20BQ9P0W2 317 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms