RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 UBE3DQ7Z6J8 389 aa3.51□□□□□ -1.85
RC3H1-206ENST00000531594 ANKLE2Q86XL3 938 aa3.51□□□□□ -1.85
RC3H1-206ENST00000531594 SPACA3Q8IXA5 215 aa3.51□□□□□ -1.85
RC3H1-206ENST00000531594 SMYD4Q8IYR2 804 aaPredicted RBP3.51□□□□□ -1.85
RC3H1-206ENST00000531594 GTF3C2Q8WUA4 911 aaPredicted RBP3.51□□□□□ -1.85
RC3H1-206ENST00000531594 DIRC2Q96SL1 478 aa3.51□□□□□ -1.85
RC3H1-206ENST00000531594 PIDD1Q9HB75 910 aa3.51□□□□□ -1.85
RC3H1-206ENST00000531594 TMEM265A0A087WTH1 108 aa3.5□□□□□ -1.85
RC3H1-206ENST00000531594 RNGTTO60942 597 aaKnown RBP3.5□□□□□ -1.85
RC3H1-206ENST00000531594 KRTAP10-2P60368 255 aa3.5□□□□□ -1.85
RC3H1-206ENST00000531594 ID3Q02535 119 aa3.5□□□□□ -1.85
RC3H1-206ENST00000531594 NKPD1Q17RQ9 610 aa3.5□□□□□ -1.85
RC3H1-206ENST00000531594 ARHGAP27Q6ZUM4 889 aa3.5□□□□□ -1.85
RC3H1-206ENST00000531594 SIAH1Q8IUQ4 282 aa3.5□□□□□ -1.85
RC3H1-206ENST00000531594 TTC16Q8NEE8 873 aa3.5□□□□□ -1.85
RC3H1-206ENST00000531594 ISL2Q96A47 359 aa3.5□□□□□ -1.85
RC3H1-206ENST00000531594 GLI1P08151 1106 aa3.49□□□□□ -1.85
RC3H1-206ENST00000531594 HOXA5P20719 270 aa3.49□□□□□ -1.85
RC3H1-206ENST00000531594 HP1BP3Q5SSJ5 553 aaPredicted RBP3.49□□□□□ -1.85
RC3H1-206ENST00000531594 MPZL3Q6UWV2 235 aa3.49□□□□□ -1.85
RC3H1-206ENST00000531594 GALNT12Q8IXK2 581 aa3.49□□□□□ -1.85
RC3H1-206ENST00000531594 GJD3Q8N144 294 aa3.49□□□□□ -1.85
RC3H1-206ENST00000531594 KIRREL1Q96J84 757 aa3.49□□□□□ -1.85
RC3H1-206ENST00000531594 PPP1R16BQ96T49 567 aa3.49□□□□□ -1.85
RC3H1-206ENST00000531594 NSUN3Q9H649 340 aaKnown RBP3.49□□□□□ -1.85
RC3H1-206ENST00000531594 MKNK2Q9HBH9 465 aa3.49□□□□□ -1.85
RC3H1-206ENST00000531594 ITPKAP23677 461 aa3.48□□□□□ -1.85
RC3H1-206ENST00000531594 CTSWP56202 376 aa3.48□□□□□ -1.85
RC3H1-206ENST00000531594 AAMPQ13685 434 aa3.48□□□□□ -1.85
RC3H1-206ENST00000531594 KIF4BQ2VIQ3 1234 aa3.48□□□□□ -1.85
RC3H1-206ENST00000531594 STK35Q8TDR2 534 aa3.48□□□□□ -1.85
RC3H1-206ENST00000531594 ATXN3LQ9H3M9 355 aa3.48□□□□□ -1.85
RC3H1-206ENST00000531594 CARS2Q9HA77 564 aaKnown RBP3.48□□□□□ -1.85
RC3H1-206ENST00000531594 ABCB6Q9NP58 842 aa3.48□□□□□ -1.85
RC3H1-206ENST00000531594 CD320Q9NPF0 282 aa3.48□□□□□ -1.85
RC3H1-206ENST00000531594 SYNGAP1Q96PV0 1343 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 CNTNAP4Q9C0A0 1308 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 NFIBO00712 420 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 MPRIPQ6WCQ1 1025 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 ATG14Q6ZNE5 492 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 AMIGO3Q86WK7 504 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 NPHS2Q9NP85 383 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 ANO2Q9NQ90 1003 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 RAPGEFL1Q9UHV5 662 aa3.47□□□□□ -1.85
RC3H1-206ENST00000531594 A0A0G2JLL6 359 aaPredicted RBP3.46□□□□□ -1.86
RC3H1-206ENST00000531594 PRR33A8MZF0 331 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 ETV2O00321 342 aaPredicted RBP3.46□□□□□ -1.86
RC3H1-206ENST00000531594 NPR3P17342 541 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 NTF4P34130 210 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 AFMP43652 599 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 ORC1Q13415 861 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 KCNA10Q16322 511 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 KIAA0319Q5VV43 1072 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 CYFIP1Q7L576 1253 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 PDZD3Q86UT5 571 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 FBXO15Q8NCQ5 510 aaPredicted RBP3.46□□□□□ -1.86
RC3H1-206ENST00000531594 KRTAP9-8Q9BYQ0 159 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 EHD4Q9H223 541 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 ATP13A1Q9HD20 1204 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 PCOLCE2Q9UKZ9 415 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 SNX11Q9Y5W9 270 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 ADAMTS20P59510 1910 aa3.46□□□□□ -1.86
RC3H1-206ENST00000531594 EOMESO95936 686 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 GSTP1P09211 210 aaKnown RBP3.45□□□□□ -1.86
RC3H1-206ENST00000531594 EHHADHQ08426 723 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 AP3B2Q13367 1082 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 ZNF211Q13398 564 aaPredicted RBP3.45□□□□□ -1.86
RC3H1-206ENST00000531594 TMEM67Q5HYA8 995 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 ALKBH2Q6NS38 261 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.45□□□□□ -1.86
RC3H1-206ENST00000531594 ASB11Q8WXH4 323 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 ZFYVE1Q9HBF4 777 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 SEMA3GQ9NS98 782 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 CSADQ9Y600 493 aa3.45□□□□□ -1.86
RC3H1-206ENST00000531594 CARNS1A5YM72 827 aa3.44□□□□□ -1.86
RC3H1-206ENST00000531594 EIF4EBP3O60516 100 aaPredicted RBP3.44□□□□□ -1.86
RC3H1-206ENST00000531594 SLFN14P0C7P3 912 aa3.44□□□□□ -1.86
RC3H1-206ENST00000531594 LINC00310P59036 64 aa3.44□□□□□ -1.86
RC3H1-206ENST00000531594 ERVFC1P60507 584 aa3.44□□□□□ -1.86
RC3H1-206ENST00000531594 ZC3H12AQ5D1E8 599 aaKnown RBP3.44□□□□□ -1.86
RC3H1-206ENST00000531594 PPM1JQ5JR12 505 aa3.44□□□□□ -1.86
RC3H1-206ENST00000531594 DDX54Q8TDD1 881 aaKnown RBP3.44□□□□□ -1.86
RC3H1-206ENST00000531594 KCNB2Q92953 911 aa3.44□□□□□ -1.86
RC3H1-206ENST00000531594 HSPA12BQ96MM6 686 aa3.44□□□□□ -1.86
RC3H1-206ENST00000531594 IRF2BPLQ9H1B7 796 aa3.44□□□□□ -1.86
RC3H1-206ENST00000531594 SSU72Q9NP77 194 aaKnown RBP3.44□□□□□ -1.86
RC3H1-206ENST00000531594 SMG5Q9UPR3 1016 aaKnown RBP3.44□□□□□ -1.86
RC3H1-206ENST00000531594 NUAK1O60285 661 aa3.43□□□□□ -1.86
RC3H1-206ENST00000531594 MED14OSP0DP75 135 aa3.43□□□□□ -1.86
RC3H1-206ENST00000531594 SSFA2P28290 1259 aa3.43□□□□□ -1.86
RC3H1-206ENST00000531594 USP5P45974 858 aa3.43□□□□□ -1.86
RC3H1-206ENST00000531594 CIAPIN1Q6FI81 312 aa3.43□□□□□ -1.86
RC3H1-206ENST00000531594 PHLDB3Q6NSJ2 640 aa3.43□□□□□ -1.86
RC3H1-206ENST00000531594 RNF214Q8ND24 703 aa3.43□□□□□ -1.86
RC3H1-206ENST00000531594 PRDM10Q9NQV6 1147 aa3.43□□□□□ -1.86
RC3H1-206ENST00000531594 TMEM238LA0A1B0GVL6 79 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 TCAF2A6NFQ2 919 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 H3BS24 57 aa3.42□□□□□ -1.86
RC3H1-206ENST00000531594 IGF2BP3O00425 579 aaKnown RBP eCLIP3.42□□□□□ -1.86
RC3H1-206ENST00000531594 TMEM253P0C7T8 217 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms