RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ITGB4P16144 1822 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 COL16A1Q07092 1604 aaPredicted RBP6.68□□□□□ -1.34
PCF11-205ENST00000530906 JCADQ9P266 1359 aa6.68□□□□□ -1.34
PCF11-205ENST00000530906 BCL9O00512 1426 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 ANKRD36CQ5JPF3 1778 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 CELA2BP08218 269 aaPredicted RBP6.67□□□□□ -1.34
PCF11-205ENST00000530906 HSP90B1P14625 803 aaKnown RBP6.67□□□□□ -1.34
PCF11-205ENST00000530906 PSMA5P28066 241 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 ERVK-9P63128 1117 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 PTPN12Q05209 780 aaKnown RBP6.67□□□□□ -1.34
PCF11-205ENST00000530906 TNNI3KQ59H18 835 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 TSHZ3Q63HK5 1081 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 NBPF10Q6P3W6 841 aaKnown RBP6.67□□□□□ -1.34
PCF11-205ENST00000530906 KIF6Q6ZMV9 814 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 UBE3BQ7Z3V4 1068 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 UNC5CLQ8IV45 518 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 TRIM22Q8IYM9 498 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 NBPF15Q8N660 670 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 GMCL1Q96IK5 515 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 ISCA1Q9BUE6 129 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 ALDH8A1Q9H2A2 487 aaPredicted RBP6.67□□□□□ -1.34
PCF11-205ENST00000530906 SH2B1Q9NRF2 756 aaPredicted RBP6.67□□□□□ -1.34
PCF11-205ENST00000530906 PCDHB9Q9Y5E1 797 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 DNMT3AQ9Y6K1 912 aaPredicted RBP6.67□□□□□ -1.34
PCF11-205ENST00000530906 FPGT-TNNI3KV9GXZ4 949 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 LTBP4Q8N2S1 1624 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 CDHR2Q9BYE9 1310 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 ZNF831Q5JPB2 1677 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 NRAPQ86VF7 1730 aa6.67□□□□□ -1.34
PCF11-205ENST00000530906 A0A1W2PRU2 124 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 ERVV-1B6SEH8 477 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 EXOC5O00471 708 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 PCCAP05165 728 aaPredicted RBP6.66□□□□□ -1.34
PCF11-205ENST00000530906 MARSP56192 900 aaKnown RBP6.66□□□□□ -1.34
PCF11-205ENST00000530906 TCIRG1Q13488 830 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 KRT32Q14532 448 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 ANKRD1Q15327 319 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 DBN1Q16643 649 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 KLHL40Q2TBA0 621 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 TSGA10IPQ3SY00 556 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 VPS53Q5VIR6 699 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 KANK3Q6NY19 840 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 DDX54Q8TDD1 881 aaKnown RBP6.66□□□□□ -1.34
PCF11-205ENST00000530906 CHMP4CQ96CF2 233 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 EAF2Q96CJ1 260 aaPredicted RBP6.66□□□□□ -1.34
PCF11-205ENST00000530906 TMX3Q96JJ7 454 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 PCMTD1Q96MG8 357 aaPredicted RBP6.66□□□□□ -1.34
PCF11-205ENST00000530906 STRN4Q9NRL3 753 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 BTG4Q9NY30 223 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 LIMCH1Q9UPQ0 1083 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 PA2G4Q9UQ80 394 aaKnown RBP6.66□□□□□ -1.34
PCF11-205ENST00000530906 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.66□□□□□ -1.34
PCF11-205ENST00000530906 CCDC171Q6TFL3 1326 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 PALLDQ8WX93 1383 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 MED23Q9ULK4 1368 aa6.66□□□□□ -1.34
PCF11-205ENST00000530906 RREB1Q92766 1687 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 PHLPP1O60346 1717 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 FSD2A1L4K1 749 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 GOLGA6L3A6NEY3 463 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 EYA2O00167 538 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 MEN1O00255 615 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 BAG4O95429 457 aaKnown RBP6.65□□□□□ -1.34
PCF11-205ENST00000530906 MRE11P49959 708 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 FOXO4P98177 505 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 EPHA10Q5JZY3 1008 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 LMBR1LQ6UX01 489 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 CCDC125Q86Z20 511 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 MAP4K1Q92918 833 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 SCARF2Q96GP6 870 aaPredicted RBP6.65□□□□□ -1.34
PCF11-205ENST00000530906 TTC14Q96N46 770 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 HAUS7Q99871 368 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 FSD1Q9BTV5 496 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 BCL11AQ9H165 835 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 AKAP2Q9Y2D5 859 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 DYRK1BQ9Y463 629 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 ATP6V1DQ9Y5K8 247 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 SNX14Q9Y5W7 946 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 CYP46A1Q9Y6A2 500 aa6.65□□□□□ -1.34
PCF11-205ENST00000530906 MAP3K15Q6ZN16 1313 aa6.65□□□□□ -1.35
PCF11-205ENST00000530906 SH3TC1Q8TE82 1336 aa6.65□□□□□ -1.35
PCF11-205ENST00000530906 WDR33Q9C0J8 1336 aaKnown RBP6.65□□□□□ -1.35
PCF11-205ENST00000530906 ZNF609O15014 1411 aa6.65□□□□□ -1.35
PCF11-205ENST00000530906 GPR25O00155 361 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 GPR37L1O60883 481 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 PTCD1O75127 700 aaKnown RBP6.64□□□□□ -1.35
PCF11-205ENST00000530906 MBD3O95983 291 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 A1BGP04217 495 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 ZFYP08048 801 aaPredicted RBP6.64□□□□□ -1.35
PCF11-205ENST00000530906 IL6STP40189 918 aaPredicted RBP6.64□□□□□ -1.35
PCF11-205ENST00000530906 SCTRP47872 440 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 POU4F2Q12837 409 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 NECTIN1Q15223 517 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 USPL1Q5W0Q7 1092 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 CC2D2BQ6DHV5 1058 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 CWC27Q6UX04 472 aaKnown RBP6.64□□□□□ -1.35
PCF11-205ENST00000530906 TTLL7Q6ZT98 887 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 KBTBD3Q8NAB2 608 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 ZBTB38Q8NAP3 1195 aaPredicted RBP6.64□□□□□ -1.35
PCF11-205ENST00000530906 PIGBQ92521 554 aa6.64□□□□□ -1.35
PCF11-205ENST00000530906 GRIP2Q9C0E4 1043 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms