RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GNL2Q13823 731 aaKnown RBP19.94■□□□□ 0.78
BRCA2-204ENST00000530893 UBE4AQ14139 1066 aa19.94■□□□□ 0.78
BRCA2-204ENST00000530893 SF3B3Q15393 1217 aaKnown RBP19.94■□□□□ 0.78
BRCA2-204ENST00000530893 LCORLQ8N3X6 602 aa19.94■□□□□ 0.78
BRCA2-204ENST00000530893 SENP2Q9HC62 589 aa19.94■□□□□ 0.78
BRCA2-204ENST00000530893 A0A1B0GUL6 1792 aa19.94■□□□□ 0.78
BRCA2-204ENST00000530893 CCDC196A0A1B0GTZ2 297 aa19.93■□□□□ 0.78
BRCA2-204ENST00000530893 ERICH2A1L162 156 aa19.93■□□□□ 0.78
BRCA2-204ENST00000530893 ZNF202O95125 648 aa19.93■□□□□ 0.78
BRCA2-204ENST00000530893 PHKBQ93100 1093 aa19.93■□□□□ 0.78
BRCA2-204ENST00000530893 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.93■□□□□ 0.78
BRCA2-204ENST00000530893 FAM237AA0A1B0GTK4 181 aa19.93■□□□□ 0.78
BRCA2-204ENST00000530893 RANBP6O60518 1105 aaKnown RBP19.93■□□□□ 0.78
BRCA2-204ENST00000530893 RXRAP19793 462 aa19.93■□□□□ 0.78
BRCA2-204ENST00000530893 GTF2F1P35269 517 aaKnown RBP eCLIP19.93■□□□□ 0.78
BRCA2-204ENST00000530893 ANKRD18AQ8IVF6 992 aa19.93■□□□□ 0.78
BRCA2-204ENST00000530893 MAP7D2Q96T17 732 aa19.93■□□□□ 0.78
BRCA2-204ENST00000530893 SLC3A2P08195 630 aaKnown RBP19.92■□□□□ 0.78
BRCA2-204ENST00000530893 PPP2R5BQ15173 497 aa19.92■□□□□ 0.78
BRCA2-204ENST00000530893 C17orf53Q8N3J3 647 aaPredicted RBP19.92■□□□□ 0.78
BRCA2-204ENST00000530893 AIFM3Q96NN9 605 aa19.92■□□□□ 0.78
BRCA2-204ENST00000530893 BSDC1Q9NW68 430 aaPredicted RBP19.92■□□□□ 0.78
BRCA2-204ENST00000530893 ANAPC4Q9UJX5 808 aa19.92■□□□□ 0.78
BRCA2-204ENST00000530893 PFKFB1P16118 471 aa19.92■□□□□ 0.78
BRCA2-204ENST00000530893 CHAF1AQ13111 956 aaPredicted RBP19.92■□□□□ 0.78
BRCA2-204ENST00000530893 WTAPQ15007 396 aa19.92■□□□□ 0.78
BRCA2-204ENST00000530893 TRIM22Q8IYM9 498 aa19.92■□□□□ 0.78
BRCA2-204ENST00000530893 PDCL3Q9H2J4 239 aa19.92■□□□□ 0.78
BRCA2-204ENST00000530893 PRKAB2O43741 272 aa19.91■□□□□ 0.78
BRCA2-204ENST00000530893 PTPAQ15257 358 aa19.91■□□□□ 0.78
BRCA2-204ENST00000530893 MTERF4Q7Z6M4 381 aaKnown RBP19.91■□□□□ 0.78
BRCA2-204ENST00000530893 MAP3K14Q99558 947 aa19.91■□□□□ 0.78
BRCA2-204ENST00000530893 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.91■□□□□ 0.78
BRCA2-204ENST00000530893 HPSEQ9Y251 543 aa19.91■□□□□ 0.78
BRCA2-204ENST00000530893 CYP7A1P22680 504 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 CAVIN4Q5BKX8 364 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 SLC26A6Q9BXS9 759 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 INCENPQ9NQS7 918 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 NRBP1Q9UHY1 535 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 TACC3Q9Y6A5 838 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 WDHD1O75717 1129 aaPredicted RBP19.9■□□□□ 0.78
BRCA2-204ENST00000530893 NLRP12P59046 1061 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 PPARAQ07869 468 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 SAFBQ15424 915 aaKnown RBP eCLIP19.9■□□□□ 0.78
BRCA2-204ENST00000530893 RTN1Q16799 776 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 CCDC144CPQ8IYA2 1237 aa19.9■□□□□ 0.78
BRCA2-204ENST00000530893 LTBP4Q8N2S1 1624 aa19.89■□□□□ 0.78
BRCA2-204ENST00000530893 CNTNAP4Q9C0A0 1308 aa19.89■□□□□ 0.77
BRCA2-204ENST00000530893 CUTAO60888 179 aa19.89■□□□□ 0.77
BRCA2-204ENST00000530893 PCP11498 1178 aaKnown RBP19.89■□□□□ 0.77
BRCA2-204ENST00000530893 SYKP43405 635 aa19.89■□□□□ 0.77
BRCA2-204ENST00000530893 TPM4P67936 248 aa19.89■□□□□ 0.77
BRCA2-204ENST00000530893 SLC10A5Q5PT55 438 aa19.89■□□□□ 0.77
BRCA2-204ENST00000530893 AOPEPQ8N6M6 819 aa19.89■□□□□ 0.77
BRCA2-204ENST00000530893 SCN7AQ01118 1682 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 MAGEB6P1A0A0J9YX57 407 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 SEMA3EO15041 775 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 DEXIO95424 95 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 NOSTRINQ8IVI9 506 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 MIGA1Q8NAN2 632 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 ESR2Q92731 530 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 MYL10Q9BUA6 226 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 FOXP1Q9H334 677 aaPredicted RBP19.88■□□□□ 0.77
BRCA2-204ENST00000530893 TOMM22Q9NS69 142 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 CASZ1Q86V15 1759 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 MMP1P03956 469 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 DHX8Q14562 1220 aaKnown RBP19.88■□□□□ 0.77
BRCA2-204ENST00000530893 ERFEQ4G0M1 354 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 RESP18Q5W5W9 173 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 ELOA2Q8IYF1 753 aaPredicted RBP19.88■□□□□ 0.77
BRCA2-204ENST00000530893 UBAC1Q9BSL1 405 aa19.88■□□□□ 0.77
BRCA2-204ENST00000530893 MROH7-TTC4A0A0A0MT08 1334 aa19.87■□□□□ 0.77
BRCA2-204ENST00000530893 PDS5AQ29RF7 1337 aaKnown RBP19.87■□□□□ 0.77
BRCA2-204ENST00000530893 SMTNL1A8MU46 457 aa19.87■□□□□ 0.77
BRCA2-204ENST00000530893 MARCKSP29966 332 aaPredicted RBP19.87■□□□□ 0.77
BRCA2-204ENST00000530893 DPCR1Q3MIW9 517 aa19.87■□□□□ 0.77
BRCA2-204ENST00000530893 RRP12Q5JTH9 1297 aaKnown RBP19.87■□□□□ 0.77
BRCA2-204ENST00000530893 TMED8Q6PL24 325 aaPredicted RBP19.87■□□□□ 0.77
BRCA2-204ENST00000530893 LRRC8AQ8IWT6 810 aa19.87■□□□□ 0.77
BRCA2-204ENST00000530893 CACTINQ8WUQ7 758 aaKnown RBP19.87■□□□□ 0.77
BRCA2-204ENST00000530893 RAI14Q9P0K7 980 aa19.87■□□□□ 0.77
BRCA2-204ENST00000530893 TUBE1Q9UJT0 475 aa19.87■□□□□ 0.77
BRCA2-204ENST00000530893 CACNA1SQ13698 1873 aa19.87■□□□□ 0.77
BRCA2-204ENST00000530893 LRMPQ12912 555 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 CCDC144BQ3MJ40 725 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 SHC4Q6S5L8 630 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 BRIP1Q9BX63 1249 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 IMPACTQ9P2X3 320 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 ABCF2Q9UG63 623 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 IKBKBO14920 756 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 KCNQ2O43526 872 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 GSDMDP57764 484 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 RILPL1Q5EBL4 403 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 NBPF11Q86T75 865 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 CRACR2BQ8N4Y2 399 aaPredicted RBP19.86■□□□□ 0.77
BRCA2-204ENST00000530893 FANCBQ8NB91 859 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 LINC00116Q8NCU8 138 aa19.86■□□□□ 0.77
BRCA2-204ENST00000530893 ERCC4Q92889 916 aaPredicted RBP19.86■□□□□ 0.77
BRCA2-204ENST00000530893 RIOK1Q9BRS2 568 aaKnown RBP19.86■□□□□ 0.77
BRCA2-204ENST00000530893 NYXQ9GZU5 481 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms