RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 EFHC2Q5JST6 749 aa9.91□□□□□ -0.82
SVIP-204ENST00000530199 CCDC74AQ96AQ1 378 aa9.91□□□□□ -0.82
SVIP-204ENST00000530199 ZCCHC2Q9C0B9 1178 aaKnown RBP9.91□□□□□ -0.82
SVIP-204ENST00000530199 POLR3AO14802 1390 aaPredicted RBP9.9□□□□□ -0.82
SVIP-204ENST00000530199 NRG2O14511 850 aaPredicted RBP9.9□□□□□ -0.82
SVIP-204ENST00000530199 FOXN1O15353 648 aa9.9□□□□□ -0.82
SVIP-204ENST00000530199 MAN1A2O60476 641 aa9.9□□□□□ -0.82
SVIP-204ENST00000530199 GFRA3O60609 400 aa9.9□□□□□ -0.82
SVIP-204ENST00000530199 COL23A1Q86Y22 540 aaPredicted RBP9.9□□□□□ -0.82
SVIP-204ENST00000530199 ACSBG1Q96GR2 724 aa9.9□□□□□ -0.82
SVIP-204ENST00000530199 CARD10Q9BWT7 1032 aa9.9□□□□□ -0.82
SVIP-204ENST00000530199 POGKQ9P215 609 aa9.9□□□□□ -0.82
SVIP-204ENST00000530199 PLEKHG2Q9H7P9 1386 aa9.89□□□□□ -0.83
SVIP-204ENST00000530199 ABCC6O95255 1503 aa9.89□□□□□ -0.83
SVIP-204ENST00000530199 KCNQ4P56696 695 aa9.89□□□□□ -0.83
SVIP-204ENST00000530199 LBRQ14739 615 aaKnown RBP9.89□□□□□ -0.83
SVIP-204ENST00000530199 C9orf131Q5VYM1 1079 aa9.89□□□□□ -0.83
SVIP-204ENST00000530199 NLRP13Q86W25 1043 aa9.89□□□□□ -0.83
SVIP-204ENST00000530199 EPS8L3Q8TE67 593 aaKnown RBP9.89□□□□□ -0.83
SVIP-204ENST00000530199 METTL5Q9NRN9 209 aaKnown RBP9.89□□□□□ -0.83
SVIP-204ENST00000530199 ITSN1Q15811 1721 aa9.89□□□□□ -0.83
SVIP-204ENST00000530199 SPATA31E1Q6ZUB1 1445 aa9.89□□□□□ -0.83
SVIP-204ENST00000530199 KDM2BQ8NHM5 1336 aa9.88□□□□□ -0.83
SVIP-204ENST00000530199 IRS1P35568 1242 aa9.88□□□□□ -0.83
SVIP-204ENST00000530199 PI16Q6UXB8 463 aa9.88□□□□□ -0.83
SVIP-204ENST00000530199 CHRDQ9H2X0 955 aa9.88□□□□□ -0.83
SVIP-204ENST00000530199 ATP13A2Q9NQ11 1180 aa9.88□□□□□ -0.83
SVIP-204ENST00000530199 ABI2Q9NYB9 513 aaPredicted RBP9.88□□□□□ -0.83
SVIP-204ENST00000530199 CNTN3Q9P232 1028 aa9.88□□□□□ -0.83
SVIP-204ENST00000530199 COL18A1P39060 1754 aa9.88□□□□□ -0.83
SVIP-204ENST00000530199 GIPC1O14908 333 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 CTSHP09668 335 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 FAM157BP0CG42 384 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 EIF4BP23588 611 aaKnown RBP9.87□□□□□ -0.83
SVIP-204ENST00000530199 ERCC5P28715 1186 aaPredicted RBP9.87□□□□□ -0.83
SVIP-204ENST00000530199 CTCFP49711 727 aaPredicted RBP9.87□□□□□ -0.83
SVIP-204ENST00000530199 FANCCQ00597 558 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 FIGNL1Q6PIW4 674 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 METTL16Q86W50 562 aaKnown RBP9.87□□□□□ -0.83
SVIP-204ENST00000530199 C1orf127Q8N9H9 656 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 CRELD1Q96HD1 420 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 NLRP2Q9NX02 1062 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 KCNH4Q9UQ05 1017 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 CCDC7Q96M83 1385 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 TNRC18O15417 2968 aaPredicted RBP9.87□□□□□ -0.83
SVIP-204ENST00000530199 PIK3C2AO00443 1686 aa9.87□□□□□ -0.83
SVIP-204ENST00000530199 ATXN7O15265 892 aaPredicted RBP9.86□□□□□ -0.83
SVIP-204ENST00000530199 EFSO43281 561 aa9.86□□□□□ -0.83
SVIP-204ENST00000530199 THBS1P07996 1170 aa9.86□□□□□ -0.83
SVIP-204ENST00000530199 MSL1Q68DK7 614 aa9.86□□□□□ -0.83
SVIP-204ENST00000530199 RIPOR1Q6ZS17 1223 aa9.86□□□□□ -0.83
SVIP-204ENST00000530199 OSBPL7Q9BZF2 842 aa9.86□□□□□ -0.83
SVIP-204ENST00000530199 AAASQ9NRG9 546 aa9.86□□□□□ -0.83
SVIP-204ENST00000530199 EREGO14944 169 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 ST8SIA5O15466 376 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 POLR3DP05423 398 aaPredicted RBP9.85□□□□□ -0.83
SVIP-204ENST00000530199 ZNF76P36508 570 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 PTSQ03393 145 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 SFSWAPQ12872 951 aaKnown RBP9.85□□□□□ -0.83
SVIP-204ENST00000530199 TTC39BQ5VTQ0 682 aaPredicted RBP9.85□□□□□ -0.83
SVIP-204ENST00000530199 NT5DC4Q86YG4 428 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 GALNT12Q8IXK2 581 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 RNF34Q969K3 372 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 PMEPA1Q969W9 287 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 C12orf49Q9H741 205 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 NPHS2Q9NP85 383 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 PCDHGC4Q9Y5F7 938 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 TNRC6CQ9HCJ0 1690 aaKnown RBP9.85□□□□□ -0.83
SVIP-204ENST00000530199 LY75O60449 1722 aa9.85□□□□□ -0.83
SVIP-204ENST00000530199 ACEP12821 1306 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 SLIT3O75094 1523 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 KCPQ6ZWJ8 1503 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 SLC35F4A4IF30 521 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 SOBPA7XYQ1 873 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 RAD51AP2Q09MP3 1159 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 UBAP2LQ14157 1087 aaKnown RBP9.84□□□□□ -0.83
SVIP-204ENST00000530199 FLAD1Q8NFF5 587 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 RRAGCQ9HB90 399 aa9.84□□□□□ -0.83
SVIP-204ENST00000530199 SASH3O75995 380 aa9.83□□□□□ -0.84
SVIP-204ENST00000530199 CES1P23141 567 aa9.83□□□□□ -0.84
SVIP-204ENST00000530199 TNP2Q05952 138 aa9.83□□□□□ -0.84
SVIP-204ENST00000530199 CCINQ13939 588 aa9.83□□□□□ -0.84
SVIP-204ENST00000530199 RGL3Q3MIN7 710 aa9.83□□□□□ -0.84
SVIP-204ENST00000530199 GSX2Q9BZM3 304 aa9.83□□□□□ -0.84
SVIP-204ENST00000530199 NUCKS1Q9H1E3 243 aaKnown RBP9.83□□□□□ -0.84
SVIP-204ENST00000530199 PDE4DIPQ5VU43 2346 aa9.83□□□□□ -0.84
SVIP-204ENST00000530199 DCDC2BA2VCK2 349 aa9.82□□□□□ -0.84
SVIP-204ENST00000530199 H7C1W4 665 aa9.82□□□□□ -0.84
SVIP-204ENST00000530199 KHNYNO15037 678 aaKnown RBP9.82□□□□□ -0.84
SVIP-204ENST00000530199 VEGFBP49765 207 aa9.82□□□□□ -0.84
SVIP-204ENST00000530199 LAMC2Q13753 1193 aa9.82□□□□□ -0.84
SVIP-204ENST00000530199 DACH1Q9UI36 760 aa9.82□□□□□ -0.84
SVIP-204ENST00000530199 QRICH2Q9H0J4 1663 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 CCDC85CA6NKD9 419 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 CYP2E1P05181 493 aaPredicted RBP9.81□□□□□ -0.84
SVIP-204ENST00000530199 MAPTP10636 758 aaKnown RBP9.81□□□□□ -0.84
SVIP-204ENST00000530199 TARSP26639 723 aaKnown RBP9.81□□□□□ -0.84
SVIP-204ENST00000530199 LBX1P52954 281 aa9.81□□□□□ -0.84
SVIP-204ENST00000530199 DBN1Q16643 649 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms