RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 C7orf61Q8IZ16 206 aa13.07□□□□□ -0.32
COPB1-207ENST00000529866 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
COPB1-207ENST00000529866 GDF15Q99988 308 aa13.07□□□□□ -0.32
COPB1-207ENST00000529866 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.07□□□□□ -0.32
COPB1-207ENST00000529866 PNMA3Q9UL41 463 aa13.07□□□□□ -0.32
COPB1-207ENST00000529866 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
COPB1-207ENST00000529866 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
COPB1-207ENST00000529866 PTPRAP18433 802 aa13.06□□□□□ -0.32
COPB1-207ENST00000529866 LRIT3Q3SXY7 679 aa13.06□□□□□ -0.32
COPB1-207ENST00000529866 USP40Q9NVE5 1235 aa13.06□□□□□ -0.32
COPB1-207ENST00000529866 FAM198AQ9UFP1 575 aa13.06□□□□□ -0.32
COPB1-207ENST00000529866 LRRFIP2Q9Y608 721 aaKnown RBP13.06□□□□□ -0.32
COPB1-207ENST00000529866 UTYO14607 1347 aa13.06□□□□□ -0.32
COPB1-207ENST00000529866 HMGCRP04035 888 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 LDHBP07195 334 aaKnown RBP13.05□□□□□ -0.32
COPB1-207ENST00000529866 DIXDC1Q155Q3 683 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 FAM110CQ1W6H9 321 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 ANKRD13CQ8N6S4 541 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 DIS3LQ8TF46 1054 aaKnown RBP13.05□□□□□ -0.32
COPB1-207ENST00000529866 LPIN2Q92539 896 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 MRS2Q9HD23 443 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 GNL3LQ9NVN8 582 aaKnown RBP13.05□□□□□ -0.32
COPB1-207ENST00000529866 ZMYND8Q9ULU4 1186 aaPredicted RBP13.05□□□□□ -0.32
COPB1-207ENST00000529866 AGTPBP1Q9UPW5 1226 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 AFG3L2Q9Y4W6 797 aa13.05□□□□□ -0.32
COPB1-207ENST00000529866 ZNF316A6NFI3 1004 aaPredicted RBP13.04□□□□□ -0.32
COPB1-207ENST00000529866 TRIM75PA6NK02 468 aa13.04□□□□□ -0.32
COPB1-207ENST00000529866 PHF20L1A8MW92 1017 aa13.04□□□□□ -0.32
COPB1-207ENST00000529866 FGFR2P21802 821 aa13.04□□□□□ -0.32
COPB1-207ENST00000529866 ZSCAN29Q8IWY8 852 aaPredicted RBP13.04□□□□□ -0.32
COPB1-207ENST00000529866 TDHQ8IZJ6 230 aa13.04□□□□□ -0.32
COPB1-207ENST00000529866 ANKRD44Q8N8A2 993 aa13.04□□□□□ -0.32
COPB1-207ENST00000529866 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
COPB1-207ENST00000529866 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
COPB1-207ENST00000529866 CTNND1O60716 968 aaKnown RBP13.03□□□□□ -0.32
COPB1-207ENST00000529866 ENTPD3O75355 529 aa13.03□□□□□ -0.32
COPB1-207ENST00000529866 PRDX5P30044 214 aa13.03□□□□□ -0.32
COPB1-207ENST00000529866 Q7L0L9 218 aa13.03□□□□□ -0.32
COPB1-207ENST00000529866 IDI2Q9BXS1 227 aa13.03□□□□□ -0.32
COPB1-207ENST00000529866 C11orf49Q9H6J7 331 aa13.03□□□□□ -0.32
COPB1-207ENST00000529866 HMX1Q9NP08 348 aaPredicted RBP13.03□□□□□ -0.32
COPB1-207ENST00000529866 CACNA1FO60840 1977 aa13.02□□□□□ -0.32
COPB1-207ENST00000529866 MAGEA10P43363 369 aaPredicted RBP13.02□□□□□ -0.33
COPB1-207ENST00000529866 GCLCP48506 637 aaPredicted RBP13.02□□□□□ -0.33
COPB1-207ENST00000529866 RGS3P49796 1198 aa13.02□□□□□ -0.33
COPB1-207ENST00000529866 PABPC4Q13310 644 aaKnown RBP eCLIP13.02□□□□□ -0.33
COPB1-207ENST00000529866 ZGPATQ8N5A5 531 aaKnown RBP13.02□□□□□ -0.33
COPB1-207ENST00000529866 KLHDC4Q8TBB5 520 aa13.02□□□□□ -0.33
COPB1-207ENST00000529866 UBE2OQ9C0C9 1292 aaKnown RBP13.02□□□□□ -0.33
COPB1-207ENST00000529866 MTMR10Q9NXD2 777 aa13.02□□□□□ -0.33
COPB1-207ENST00000529866 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.33
COPB1-207ENST00000529866 RPTORQ8N122 1335 aa13.02□□□□□ -0.33
COPB1-207ENST00000529866 SALL1Q9NSC2 1324 aa13.02□□□□□ -0.33
COPB1-207ENST00000529866 EYA2O00167 538 aa13.01□□□□□ -0.33
COPB1-207ENST00000529866 SEMA3EO15041 775 aa13.01□□□□□ -0.33
COPB1-207ENST00000529866 ZFPM1Q8IX07 1006 aa13.01□□□□□ -0.33
COPB1-207ENST00000529866 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
COPB1-207ENST00000529866 PROCA1Q8NCQ7 364 aaPredicted RBP13.01□□□□□ -0.33
COPB1-207ENST00000529866 DENND2AQ9ULE3 1009 aa13.01□□□□□ -0.33
COPB1-207ENST00000529866 SYN1P17600 705 aa13□□□□□ -0.33
COPB1-207ENST00000529866 MAP3K10Q02779 954 aa13□□□□□ -0.33
COPB1-207ENST00000529866 DZIP1Q86YF9 867 aaKnown RBP13□□□□□ -0.33
COPB1-207ENST00000529866 UNC80Q8N2C7 3258 aa13□□□□□ -0.33
COPB1-207ENST00000529866 RFX7Q2KHR2 1363 aa12.99□□□□□ -0.33
COPB1-207ENST00000529866 GAKO14976 1311 aa12.99□□□□□ -0.33
COPB1-207ENST00000529866 ANP32CO43423 234 aa12.99□□□□□ -0.33
COPB1-207ENST00000529866 ATP2B3Q16720 1220 aa12.99□□□□□ -0.33
COPB1-207ENST00000529866 TREML2Q5T2D2 321 aa12.99□□□□□ -0.33
COPB1-207ENST00000529866 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.99□□□□□ -0.33
COPB1-207ENST00000529866 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
COPB1-207ENST00000529866 OGDHLQ9ULD0 1010 aa12.99□□□□□ -0.33
COPB1-207ENST00000529866 PICALMQ13492 652 aa12.98□□□□□ -0.33
COPB1-207ENST00000529866 SH3BP5LQ7L8J4 393 aa12.98□□□□□ -0.33
COPB1-207ENST00000529866 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
COPB1-207ENST00000529866 COL25A1Q9BXS0 654 aaPredicted RBP12.98□□□□□ -0.33
COPB1-207ENST00000529866 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
COPB1-207ENST00000529866 FBXO3Q9UK99 471 aa12.98□□□□□ -0.33
COPB1-207ENST00000529866 PTPRCP08575 1304 aa12.97□□□□□ -0.33
COPB1-207ENST00000529866 DDTLA6NHG4 134 aaPredicted RBP12.97□□□□□ -0.33
COPB1-207ENST00000529866 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
COPB1-207ENST00000529866 BTDP43251 543 aa12.97□□□□□ -0.33
COPB1-207ENST00000529866 TRMT44Q8IYL2 757 aaKnown RBP12.97□□□□□ -0.33
COPB1-207ENST00000529866 ZNF280CQ8ND82 737 aa12.97□□□□□ -0.33
COPB1-207ENST00000529866 OSBPL5Q9H0X9 879 aaPredicted RBP12.97□□□□□ -0.33
COPB1-207ENST00000529866 VCANP13611 3396 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 TTC28Q96AY4 2481 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 TBC1D12O60347 775 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 CIAO1O76071 339 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 HMGCS2P54868 508 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 IRX3P78415 501 aaPredicted RBP12.96□□□□□ -0.33
COPB1-207ENST00000529866 SPP2Q13103 211 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 SPTY2D1Q68D10 685 aaPredicted RBP12.96□□□□□ -0.33
COPB1-207ENST00000529866 CCDC84Q86UT8 332 aaPredicted RBP12.96□□□□□ -0.33
COPB1-207ENST00000529866 TRIB2Q92519 343 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
COPB1-207ENST00000529866 ASCC2Q9H1I8 757 aaPredicted RBP12.96□□□□□ -0.33
COPB1-207ENST00000529866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.96□□□□□ -0.33
COPB1-207ENST00000529866 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms