RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 STK24Q9Y6E0 443 aa6.38□□□□□ -1.39
PUM1-220ENST00000529846 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.38□□□□□ -1.39
PUM1-220ENST00000529846 RAD50Q92878 1312 aa6.38□□□□□ -1.39
PUM1-220ENST00000529846 COL4A5P29400 1685 aa6.38□□□□□ -1.39
PUM1-220ENST00000529846 TIAM2Q8IVF5 1701 aa6.38□□□□□ -1.39
PUM1-220ENST00000529846 UTRNP46939 3433 aa6.38□□□□□ -1.39
PUM1-220ENST00000529846 CCDC88AQ3V6T2 1871 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 COL2A1P02458 1487 aaPredicted RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 TRIM6-TRIM34B2RNG4 842 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 F8W031 263 aaPredicted RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 HLA-DOAP06340 250 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 SLC3A2P08195 630 aaKnown RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 PCP11498 1178 aaKnown RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 BTDP43251 543 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 RBM25P49756 843 aaKnown RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 HIRAP54198 1017 aaPredicted RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 MCMDC2Q4G0Z9 681 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 RBM26Q5T8P6 1007 aaKnown RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 ANGEL2Q5VTE6 544 aaKnown RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 ARMC9Q7Z3E5 817 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 MAGEB6Q8N7X4 407 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 C2orf69Q8N8R5 385 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 ZNF526Q8TF50 670 aaPredicted RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 PIH1D3Q9NQM4 214 aaKnown RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 DIAPH3Q9NSV4 1193 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 CTNNA3Q9UI47 895 aa6.37□□□□□ -1.39
PUM1-220ENST00000529846 HERC5Q9UII4 1024 aaKnown RBP6.37□□□□□ -1.39
PUM1-220ENST00000529846 PSME4Q14997 1843 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 LAMA4Q16363 1823 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 ZNF532Q9HCE3 1301 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 TCRBV5S4A2TA0A5A2 114 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 PATL2C9JE40 543 aaKnown RBP6.36□□□□□ -1.39
PUM1-220ENST00000529846 ITGBL1O95965 494 aaPredicted RBP6.36□□□□□ -1.39
PUM1-220ENST00000529846 USP5P45974 858 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 IREB2P48200 963 aaKnown RBP6.36□□□□□ -1.39
PUM1-220ENST00000529846 APLP1P51693 650 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 MAP3K10Q02779 954 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 NBPF9Q3BBW0 867 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 CDC42EP5Q6NZY7 148 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 SLC51AQ86UW1 340 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 TEX11Q8IYF3 940 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 RILPL2Q969X0 211 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 CCDC102AQ96A19 550 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 IPO9Q96P70 1041 aaKnown RBP6.36□□□□□ -1.39
PUM1-220ENST00000529846 MXD3Q9BW11 206 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 TRIM34Q9BYJ4 488 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 C22orf23Q9BZE7 217 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 EHD4Q9H223 541 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 TDRD3Q9H7E2 651 aaKnown RBP6.36□□□□□ -1.39
PUM1-220ENST00000529846 GGA3Q9NZ52 723 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 ARPP21Q9UBL0 812 aaPredicted RBP6.36□□□□□ -1.39
PUM1-220ENST00000529846 PCDHB8Q9UN66 801 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 PCDHB13Q9Y5F0 798 aa6.36□□□□□ -1.39
PUM1-220ENST00000529846 MYO5AQ9Y4I1 1855 aaKnown RBP6.36□□□□□ -1.39
PUM1-220ENST00000529846 ATRNL1Q5VV63 1379 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 PASKQ96RG2 1323 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 TMEM88BA6NKF7 163 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 GTPBP6O43824 516 aaPredicted RBP6.35□□□□□ -1.39
PUM1-220ENST00000529846 MCCP23508 829 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 ECE1P42892 770 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 INHBEP58166 350 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 RHBDL3P58872 404 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 RASA3Q14644 834 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 DIXDC1Q155Q3 683 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 ALX1Q15699 326 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 MAP3K11Q16584 847 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 SBK1Q52WX2 424 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 ZMYM1Q5SVZ6 1142 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 TSHZ3Q63HK5 1081 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 PI16Q6UXB8 463 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 ZNF467Q7Z7K2 595 aaPredicted RBP6.35□□□□□ -1.39
PUM1-220ENST00000529846 METTL16Q86W50 562 aaKnown RBP6.35□□□□□ -1.39
PUM1-220ENST00000529846 TRPM4Q8TD43 1214 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 STRBPQ96SI9 672 aaKnown RBP6.35□□□□□ -1.39
PUM1-220ENST00000529846 RIOK1Q9BRS2 568 aaKnown RBP6.35□□□□□ -1.39
PUM1-220ENST00000529846 ESYT1Q9BSJ8 1104 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 BCL11AQ9H165 835 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 ANTXR1Q9H6X2 564 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 VEZTQ9HBM0 779 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 AATFQ9NY61 560 aaKnown RBP eCLIP6.35□□□□□ -1.391e-8■■■□□ 18.2
PUM1-220ENST00000529846 SWAP70Q9UH65 585 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 JAG2Q9Y219 1238 aa6.35□□□□□ -1.39
PUM1-220ENST00000529846 ZMYM6O95789 1325 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 CTNND1O60716 968 aaKnown RBP6.34□□□□□ -1.39
PUM1-220ENST00000529846 WDHD1O75717 1129 aaPredicted RBP6.34□□□□□ -1.39
PUM1-220ENST00000529846 SEC24BO95487 1268 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 CHMLP26374 656 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 C1QTNF8P60827 252 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 BECN1Q14457 450 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 CCDC178Q5BJE1 867 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 MAP1SQ66K74 1059 aaPredicted RBP6.34□□□□□ -1.39
PUM1-220ENST00000529846 USP48Q86UV5 1035 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 ZSCAN29Q8IWY8 852 aaPredicted RBP6.34□□□□□ -1.39
PUM1-220ENST00000529846 ANKRD13AQ8IZ07 590 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 CDCA5Q96FF9 252 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 CCDC17Q96LX7 622 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 ZNF341Q9BYN7 854 aa6.34□□□□□ -1.39
PUM1-220ENST00000529846 OSBPL5Q9H0X9 879 aaPredicted RBP6.34□□□□□ -1.39
PUM1-220ENST00000529846 RNF41Q9H4P4 317 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms