RNA–Protein interactions for RNA: ENST00000529201.1

SNRNP35-205, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-205ENST00000529201 PPIL2Q13356 520 aa16.54■□□□□ 0.24
SNRNP35-205ENST00000529201 SNAPC2Q13487 334 aa16.54■□□□□ 0.24
SNRNP35-205ENST00000529201 MIGA2Q7L4E1 593 aa16.54■□□□□ 0.24
SNRNP35-205ENST00000529201 PANK1Q8TE04 598 aa16.54■□□□□ 0.24
SNRNP35-205ENST00000529201 ZKSCAN4Q969J2 545 aaPredicted RBP16.54■□□□□ 0.24
SNRNP35-205ENST00000529201 NSUN4Q96CB9 384 aaKnown RBP16.54■□□□□ 0.24
SNRNP35-205ENST00000529201 PTPN18Q99952 460 aa16.54■□□□□ 0.24
SNRNP35-205ENST00000529201 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
SNRNP35-205ENST00000529201 RFX7Q2KHR2 1363 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 CCL15-CCL14A0A0B4J2E2 113 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 RGS3P49796 1198 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 CCL15Q16663 113 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 NOL9Q5SY16 702 aaKnown RBP16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 RPAP2Q8IXW5 612 aaPredicted RBP16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 R3HDMLQ9H3Y0 253 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 RAI14Q9P0K7 980 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 DOCK2Q92608 1830 aa16.53■□□□□ 0.24
SNRNP35-205ENST00000529201 CRHR2Q13324 411 aa16.52■□□□□ 0.24
SNRNP35-205ENST00000529201 BRI3BPQ8WY22 251 aa16.52■□□□□ 0.24
SNRNP35-205ENST00000529201 ERO1AQ96HE7 468 aa16.52■□□□□ 0.24
SNRNP35-205ENST00000529201 DBNDD2Q9BQY9 259 aa16.52■□□□□ 0.24
SNRNP35-205ENST00000529201 NOL10Q9BSC4 688 aaKnown RBP16.52■□□□□ 0.24
SNRNP35-205ENST00000529201 ZFYVE28Q9HCC9 887 aa16.52■□□□□ 0.24
SNRNP35-205ENST00000529201 IRF6O14896 467 aa16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 HMMRO75330 724 aa16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 BAG3O95817 575 aa16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 RHBDL3P58872 404 aa16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 ARHGEF6Q15052 776 aa16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 FBXO46Q6PJ61 603 aaPredicted RBP16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 TMED8Q6PL24 325 aaPredicted RBP16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 PI16Q6UXB8 463 aa16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 TBC1D9Q6ZT07 1266 aa16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 ZNF384Q8TF68 577 aa16.51■□□□□ 0.23
SNRNP35-205ENST00000529201 COL2A1P02458 1487 aaPredicted RBP16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 TBC1D12O60347 775 aa16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 PLCG2P16885 1265 aa16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 INPP5BP32019 993 aa16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 SP3Q02447 781 aa16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 TAF1CQ15572 869 aaPredicted RBP16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 DBNLQ9UJU6 430 aaKnown RBP16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 KCNH4Q9UQ05 1017 aa16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 MAST2Q6P0Q8 1798 aa16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 ATRNL1Q5VV63 1379 aa16.5■□□□□ 0.23
SNRNP35-205ENST00000529201 PHF20L1A8MW92 1017 aa16.49■□□□□ 0.23
SNRNP35-205ENST00000529201 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
SNRNP35-205ENST00000529201 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
SNRNP35-205ENST00000529201 EAF2Q96CJ1 260 aaPredicted RBP16.49■□□□□ 0.23
SNRNP35-205ENST00000529201 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
SNRNP35-205ENST00000529201 HPS5Q9UPZ3 1129 aa16.49■□□□□ 0.23
SNRNP35-205ENST00000529201 DDTLA6NHG4 134 aaPredicted RBP16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 CXCL11O14625 94 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 CTNND1O60716 968 aaKnown RBP16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 CYP2E1P05181 493 aaPredicted RBP16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 PPP4CP60510 307 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 PICALMQ13492 652 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 SCYL3Q8IZE3 742 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 DDX4Q9NQI0 724 aaKnown RBP16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 PICK1Q9NRD5 415 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 SNRKQ9NRH2 765 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 COG6Q9Y2V7 657 aa16.48■□□□□ 0.23
SNRNP35-205ENST00000529201 TLR2O60603 784 aa16.47■□□□□ 0.23
SNRNP35-205ENST00000529201 MLLT1Q03111 559 aaPredicted RBP16.47■□□□□ 0.23
SNRNP35-205ENST00000529201 ANKRD23Q86SG2 305 aa16.47■□□□□ 0.23
SNRNP35-205ENST00000529201 CCDC8Q9H0W5 538 aaPredicted RBP16.47■□□□□ 0.23
SNRNP35-205ENST00000529201 DHX36Q9H2U1 1008 aaKnown RBP16.47■□□□□ 0.23
SNRNP35-205ENST00000529201 EXOC6BQ9Y2D4 811 aa16.47■□□□□ 0.23
SNRNP35-205ENST00000529201 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
SNRNP35-205ENST00000529201 BTBD19C9JJ37 291 aa16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 RAB11FIP3O75154 756 aa16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 ZAP70P43403 619 aa16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 OTOP1Q7RTM1 612 aa16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 TEX11Q8IYF3 940 aa16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 RHPN1Q8TCX5 695 aa16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 KIF1BPQ96EK5 621 aa16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 OSBPL5Q9H0X9 879 aaPredicted RBP16.46■□□□□ 0.23
SNRNP35-205ENST00000529201 PTPRAP18433 802 aa16.45■□□□□ 0.22
SNRNP35-205ENST00000529201 FASTKD5Q7L8L6 764 aaKnown RBP16.45■□□□□ 0.22
SNRNP35-205ENST00000529201 AACSQ86V21 672 aa16.45■□□□□ 0.22
SNRNP35-205ENST00000529201 TBC1D2Q9BYX2 928 aa16.45■□□□□ 0.22
SNRNP35-205ENST00000529201 EFCC1Q9HA90 598 aa16.45■□□□□ 0.22
SNRNP35-205ENST00000529201 TLR7Q9NYK1 1049 aaKnown RBP16.45■□□□□ 0.22
SNRNP35-205ENST00000529201 HERC5Q9UII4 1024 aaKnown RBP16.45■□□□□ 0.22
SNRNP35-205ENST00000529201 DOCK1Q14185 1865 aa16.44■□□□□ 0.22
SNRNP35-205ENST00000529201 GNRH1P01148 92 aa16.44■□□□□ 0.22
SNRNP35-205ENST00000529201 KIF22Q14807 665 aa16.44■□□□□ 0.22
SNRNP35-205ENST00000529201 TTF1Q15361 905 aaPredicted RBP16.44■□□□□ 0.22
SNRNP35-205ENST00000529201 CD99L2Q8TCZ2 262 aa16.44■□□□□ 0.22
SNRNP35-205ENST00000529201 SH3RF3Q8TEJ3 882 aaPredicted RBP16.44■□□□□ 0.22
SNRNP35-205ENST00000529201 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.22
SNRNP35-205ENST00000529201 AATFQ9NY61 560 aaKnown RBP eCLIP16.44■□□□□ 0.22
SNRNP35-205ENST00000529201 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms