RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 FAM43AQ8N2R8 423 aa7.62□□□□□ -1.19
NUP98-215ENST00000529063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.62□□□□□ -1.19
NUP98-215ENST00000529063 GCC1Q96CN9 775 aa7.62□□□□□ -1.19
NUP98-215ENST00000529063 FAM84BQ96KN1 310 aaPredicted RBP7.62□□□□□ -1.19
NUP98-215ENST00000529063 SERPINA10Q9UK55 444 aa7.62□□□□□ -1.19
NUP98-215ENST00000529063 TTF2Q9UNY4 1162 aaKnown RBP7.62□□□□□ -1.19
NUP98-215ENST00000529063 PTCH2Q9Y6C5 1203 aa7.62□□□□□ -1.19
NUP98-215ENST00000529063 CCL15-CCL14A0A0B4J2E2 113 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 TCP10L2B9ZVM9 353 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 CRKP46108 304 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 RBM5P52756 815 aaKnown RBP eCLIP7.61□□□□□ -1.19
NUP98-215ENST00000529063 CACNB3P54284 484 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 CCL15Q16663 113 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 LDHAL6AQ6ZMR3 332 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 NLRP7Q8WX94 980 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 POM121Q96HA1 1249 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 SUCLG2Q96I99 432 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 ARHGAP39Q9C0H5 1083 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 CNNM1Q9NRU3 951 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 IQSEC3Q9UPP2 1182 aaPredicted RBP7.61□□□□□ -1.19
NUP98-215ENST00000529063 SNCAIPQ9Y6H5 919 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 MGAMO43451 1857 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 DOCK2Q92608 1830 aa7.61□□□□□ -1.19
NUP98-215ENST00000529063 RANBP2P49792 3224 aaKnown RBP7.61□□□□□ -1.19
NUP98-215ENST00000529063 PTPRFP10586 1907 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 CTGFP29279 349 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 HIBADHP31937 336 aaKnown RBP7.6□□□□□ -1.19
NUP98-215ENST00000529063 TNFAIP1Q13829 316 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 UBE4AQ14139 1066 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 TAF1CQ15572 869 aaPredicted RBP7.6□□□□□ -1.19
NUP98-215ENST00000529063 CCDC57Q2TAC2 916 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 MYSM1Q5VVJ2 828 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 OTUD7BQ6GQQ9 843 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 VGLL2Q8N8G2 317 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 SHISA4Q96DD7 197 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 OTUD5Q96G74 571 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 RIPOR2Q9Y4F9 1068 aa7.6□□□□□ -1.19
NUP98-215ENST00000529063 RPAP1Q9BWH6 1393 aaPredicted RBP7.59□□□□□ -1.19
NUP98-215ENST00000529063 PHIPQ8WWQ0 1821 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 UTYO14607 1347 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 ADGRA2Q96PE1 1338 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 BTBD19C9JJ37 291 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 NBPF7P0C2Y1 421 aaPredicted RBP7.59□□□□□ -1.19
NUP98-215ENST00000529063 GTF2A2P52657 109 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 RABL6Q3YEC7 729 aaPredicted RBP7.59□□□□□ -1.19
NUP98-215ENST00000529063 SLC9C1Q4G0N8 1177 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 LRRC24Q50LG9 513 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 TAF7LQ5H9L4 462 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 PADI6Q6TGC4 694 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 FBXO33Q7Z6M2 555 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 WDR63Q8IWG1 891 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 ANKRD44Q8N8A2 993 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 SH3TC2Q8TF17 1288 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 SLC39A7Q92504 469 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 ZKSCAN4Q969J2 545 aaPredicted RBP7.59□□□□□ -1.19
NUP98-215ENST00000529063 CCDC97Q96F63 343 aaPredicted RBP7.59□□□□□ -1.19
NUP98-215ENST00000529063 SALL2Q9Y467 1007 aaPredicted RBP7.59□□□□□ -1.19
NUP98-215ENST00000529063 CEP290O15078 2479 aa7.59□□□□□ -1.19
NUP98-215ENST00000529063 ALPK3Q96L96 1907 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 TRIOBPQ9H2D6 2365 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 TLR2O60603 784 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 ALDH1L1O75891 902 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 CLK2P49760 499 aaKnown RBP7.58□□□□□ -1.2
NUP98-215ENST00000529063 LACTBP83111 547 aaPredicted RBP7.58□□□□□ -1.2
NUP98-215ENST00000529063 CHAF1AQ13111 956 aaPredicted RBP7.58□□□□□ -1.2
NUP98-215ENST00000529063 MOGSQ13724 837 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 APOBEC3HQ6NTF7 200 aaKnown RBP7.58□□□□□ -1.2
NUP98-215ENST00000529063 KLHDC4Q8TBB5 520 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 PXYLP1Q8TE99 480 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 DCBLD2Q96PD2 775 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 WRNIP1Q96S55 665 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.58□□□□□ -1.2
NUP98-215ENST00000529063 SRCIN1Q9C0H9 1055 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 BICC1Q9H694 974 aaKnown RBP7.58□□□□□ -1.2
NUP98-215ENST00000529063 ZFYVE28Q9HCC9 887 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 PCDHGA4Q9Y5G9 962 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 CSADQ9Y600 493 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 ADGRG1Q9Y653 693 aa7.58□□□□□ -1.2
NUP98-215ENST00000529063 MROH5Q6ZUA9 1318 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 AK9Q5TCS8 1911 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 MYCP01106 439 aaPredicted RBP7.57□□□□□ -1.2
NUP98-215ENST00000529063 FGFR2P21802 821 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 TNNI2P48788 182 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 HDLBPQ00341 1268 aaKnown RBP7.57□□□□□ -1.2
NUP98-215ENST00000529063 PPIL2Q13356 520 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 MTFR1Q15390 333 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 SLC4A10Q6U841 1118 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 C17orf99Q6UX52 265 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 FAM83AQ86UY5 434 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 ERO1BQ86YB8 467 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 TEKT1Q969V4 418 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 ZDHHC15Q96MV8 337 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 ZCCHC17Q9NP64 241 aaKnown RBP7.57□□□□□ -1.2
NUP98-215ENST00000529063 C9orf78Q9NZ63 289 aaPredicted RBP7.57□□□□□ -1.2
NUP98-215ENST00000529063 DOCK1Q14185 1865 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 RFX7Q2KHR2 1363 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 ATRNL1Q5VV63 1379 aa7.57□□□□□ -1.2
NUP98-215ENST00000529063 MYH2Q9UKX2 1941 aa7.56□□□□□ -1.2
NUP98-215ENST00000529063 H0YGN5 161 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms