RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TOP2AP11388 1531 aaKnown RBP7.96□□□□□ -1.14
CSDE1-212ENST00000529046 BTBD11A6QL63 1104 aa7.95□□□□□ -1.14
CSDE1-212ENST00000529046 WDR64B1ANS9 1081 aa7.95□□□□□ -1.14
CSDE1-212ENST00000529046 GSTP1P09211 210 aaKnown RBP7.95□□□□□ -1.14
CSDE1-212ENST00000529046 RAB6AP20340 208 aa7.95□□□□□ -1.14
CSDE1-212ENST00000529046 ST13P50502 369 aaKnown RBP7.95□□□□□ -1.14
CSDE1-212ENST00000529046 FBXL6Q8N531 539 aa7.95□□□□□ -1.14
CSDE1-212ENST00000529046 ZNF428Q96B54 188 aa7.95□□□□□ -1.14
CSDE1-212ENST00000529046 CRELD1Q96HD1 420 aa7.95□□□□□ -1.14
CSDE1-212ENST00000529046 CCDC86Q9H6F5 360 aaKnown RBP7.95□□□□□ -1.14
CSDE1-212ENST00000529046 FAM105AQ9NUU6 356 aa7.95□□□□□ -1.14
CSDE1-212ENST00000529046 USP31Q70CQ4 1352 aa7.95□□□□□ -1.14
CSDE1-212ENST00000529046 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.94□□□□□ -1.14
CSDE1-212ENST00000529046 PRR19A6NJB7 356 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 RECKO95980 971 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 USP17L7P0C7H9 530 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 LIG1P18858 919 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 ASPAP45381 313 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 MAP7Q14244 749 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 INTS5Q6P9B9 1019 aaKnown RBP7.94□□□□□ -1.14
CSDE1-212ENST00000529046 MRRFQ96E11 262 aaKnown RBP7.94□□□□□ -1.14
CSDE1-212ENST00000529046 ATG3Q9NT62 314 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 SYNGAP1Q96PV0 1343 aa7.94□□□□□ -1.14
CSDE1-212ENST00000529046 SULF2Q8IWU5 870 aa7.93□□□□□ -1.14
CSDE1-212ENST00000529046 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-212ENST00000529046 ACSS3Q9H6R3 686 aa7.93□□□□□ -1.14
CSDE1-212ENST00000529046 KRT82Q9NSB4 513 aa7.93□□□□□ -1.14
CSDE1-212ENST00000529046 IGSF5Q9NSI5 407 aa7.93□□□□□ -1.14
CSDE1-212ENST00000529046 KIAA1324LA8MWY0 1029 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-212ENST00000529046 F13BP05160 661 aa7.92□□□□□ -1.14
CSDE1-212ENST00000529046 NFICP08651 508 aa7.92□□□□□ -1.14
CSDE1-212ENST00000529046 KCNB2Q92953 911 aa7.92□□□□□ -1.14
CSDE1-212ENST00000529046 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-212ENST00000529046 TBC1D32Q96NH3 1257 aa7.92□□□□□ -1.14
CSDE1-212ENST00000529046 OSBPL1AQ9BXW6 950 aa7.92□□□□□ -1.14
CSDE1-212ENST00000529046 SEMA6CQ9H3T2 930 aa7.92□□□□□ -1.14
CSDE1-212ENST00000529046 PRKAG2Q9UGJ0 569 aa7.92□□□□□ -1.14
CSDE1-212ENST00000529046 PPP1R9AQ9ULJ8 1098 aa7.92□□□□□ -1.14
CSDE1-212ENST00000529046 TMPRSS2O15393 492 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 ZNF862O60290 1169 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 MED26O95402 600 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 SLFN14P0C7P3 912 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 NME2P22392 152 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 ID3Q02535 119 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 CPSF6Q16630 551 aaKnown RBP eCLIP7.91□□□□□ -1.143e-7■□□□□ 8.6
CSDE1-212ENST00000529046 KIF4BQ2VIQ3 1234 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 TPTE2Q6XPS3 522 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 PDZD3Q86UT5 571 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 EMILIN2Q9BXX0 1053 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 MRS2Q9HD23 443 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 PIM2Q9P1W9 311 aa7.91□□□□□ -1.14
CSDE1-212ENST00000529046 ARNTP27540 789 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 ZAR1Q86SH2 424 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 STK35Q8TDR2 534 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 NECAB3Q96P71 396 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-212ENST00000529046 METTL22Q9BUU2 404 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-212ENST00000529046 BACH2Q9BYV9 841 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 CEP44Q9C0F1 390 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 BCL11AQ9H165 835 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 ATXN3LQ9H3M9 355 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 CRIM1Q9NZV1 1036 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 LEMD3Q9Y2U8 911 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 DAGLAQ9Y4D2 1042 aa7.9□□□□□ -1.14
CSDE1-212ENST00000529046 SPINK2P20155 84 aa7.89□□□□□ -1.15
CSDE1-212ENST00000529046 ADMP35318 185 aa7.89□□□□□ -1.15
CSDE1-212ENST00000529046 TAF1CQ15572 869 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-212ENST00000529046 MAP1SQ66K74 1059 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-212ENST00000529046 SHISA5Q8N114 240 aa7.89□□□□□ -1.15
CSDE1-212ENST00000529046 FANCD2OSQ96PS1 177 aa7.89□□□□□ -1.15
CSDE1-212ENST00000529046 NOC4LQ9BVI4 516 aaKnown RBP7.89□□□□□ -1.15
CSDE1-212ENST00000529046 PIDD1Q9HB75 910 aa7.89□□□□□ -1.15
CSDE1-212ENST00000529046 CBX8Q9HC52 389 aa7.89□□□□□ -1.15
CSDE1-212ENST00000529046 VTI1BQ9UEU0 232 aa7.89□□□□□ -1.15
CSDE1-212ENST00000529046 SAMM50Q9Y512 469 aa7.89□□□□□ -1.15
CSDE1-212ENST00000529046 URB2Q14146 1524 aaKnown RBP7.88□□□□□ -1.15
CSDE1-212ENST00000529046 ENC1O14682 589 aa7.88□□□□□ -1.15
CSDE1-212ENST00000529046 MEI1Q5TIA1 1274 aa7.88□□□□□ -1.15
CSDE1-212ENST00000529046 SV2BQ7L1I2 683 aa7.88□□□□□ -1.15
CSDE1-212ENST00000529046 METTL5Q9NRN9 209 aaKnown RBP7.88□□□□□ -1.15
CSDE1-212ENST00000529046 PCDHGC5Q9Y5F6 944 aa7.88□□□□□ -1.15
CSDE1-212ENST00000529046 CCDC88BA6NC98 1476 aa7.87□□□□□ -1.15
CSDE1-212ENST00000529046 FBXO24O75426 580 aa7.87□□□□□ -1.15
CSDE1-212ENST00000529046 HOXA10P31260 410 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-212ENST00000529046 DTX1Q86Y01 620 aa7.87□□□□□ -1.15
CSDE1-212ENST00000529046 GATA6Q92908 595 aa7.87□□□□□ -1.15
CSDE1-212ENST00000529046 ABCC8Q09428 1581 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 FAM170BA6NMN3 283 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 DYNC1LI2O43237 492 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-212ENST00000529046 FOSL1P15407 271 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 RBM25P49756 843 aaKnown RBP7.86□□□□□ -1.15
CSDE1-212ENST00000529046 CYP27A1Q02318 531 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 ZNF252P-AS1Q0IIN9 211 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 SEZ6L2Q6UXD5 910 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 ACSBG1Q96GR2 724 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 LGR6Q9HBX8 967 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 CACNA2D2Q9NY47 1150 aa7.86□□□□□ -1.15
CSDE1-212ENST00000529046 PAGE1O75459 146 aa7.85□□□□□ -1.15
CSDE1-212ENST00000529046 FANCCQ00597 558 aa7.85□□□□□ -1.15
CSDE1-212ENST00000529046 TTLL4Q14679 1199 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms