RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.4■■□□□ 1.18
LTBP3-211ENST00000528966 ZHX2Q9Y6X8 837 aa22.4■■□□□ 1.18
LTBP3-211ENST00000528966 PHF20L1A8MW92 1017 aa22.39■■□□□ 1.17
LTBP3-211ENST00000528966 ALDH1L1O75891 902 aa22.39■■□□□ 1.17
LTBP3-211ENST00000528966 DIXDC1Q155Q3 683 aa22.39■■□□□ 1.17
LTBP3-211ENST00000528966 GADL1Q6ZQY3 521 aa22.39■■□□□ 1.17
LTBP3-211ENST00000528966 ZFPM1Q8IX07 1006 aa22.39■■□□□ 1.17
LTBP3-211ENST00000528966 TAOK2Q9UL54 1235 aa22.39■■□□□ 1.17
LTBP3-211ENST00000528966 SLC45A1Q9Y2W3 748 aa22.39■■□□□ 1.17
LTBP3-211ENST00000528966 AFG3L2Q9Y4W6 797 aa22.39■■□□□ 1.17
LTBP3-211ENST00000528966 DDX60LQ5H9U9 1706 aaKnown RBP22.39■■□□□ 1.17
LTBP3-211ENST00000528966 NBPF7P0C2Y1 421 aaPredicted RBP22.38■■□□□ 1.17
LTBP3-211ENST00000528966 SYN1P17600 705 aa22.38■■□□□ 1.17
LTBP3-211ENST00000528966 PTPRAP18433 802 aa22.38■■□□□ 1.17
LTBP3-211ENST00000528966 MAGEA10P43363 369 aaPredicted RBP22.38■■□□□ 1.17
LTBP3-211ENST00000528966 EXOSC9Q06265 439 aaKnown RBP22.38■■□□□ 1.17
LTBP3-211ENST00000528966 SCYL3Q8IZE3 742 aa22.38■■□□□ 1.17
LTBP3-211ENST00000528966 BICC1Q9H694 974 aaKnown RBP22.38■■□□□ 1.17
LTBP3-211ENST00000528966 EYSQ5T1H1 3165 aa22.38■■□□□ 1.17
LTBP3-211ENST00000528966 KIF16BQ96L93 1317 aa22.37■■□□□ 1.17
LTBP3-211ENST00000528966 DOCK1Q14185 1865 aa22.37■■□□□ 1.17
LTBP3-211ENST00000528966 RABL6Q3YEC7 729 aaPredicted RBP22.37■■□□□ 1.17
LTBP3-211ENST00000528966 TDHQ8IZJ6 230 aa22.37■■□□□ 1.17
LTBP3-211ENST00000528966 ANKLE1Q8NAG6 615 aa22.37■■□□□ 1.17
LTBP3-211ENST00000528966 SMCR8Q8TEV9 937 aaPredicted RBP22.37■■□□□ 1.17
LTBP3-211ENST00000528966 FGFR2P21802 821 aa22.36■■□□□ 1.17
LTBP3-211ENST00000528966 SLC4A10Q6U841 1118 aa22.36■■□□□ 1.17
LTBP3-211ENST00000528966 SRCIN1Q9C0H9 1055 aa22.36■■□□□ 1.17
LTBP3-211ENST00000528966 PICK1Q9NRD5 415 aa22.36■■□□□ 1.17
LTBP3-211ENST00000528966 UTYO14607 1347 aa22.35■■□□□ 1.17
LTBP3-211ENST00000528966 PRDX5P30044 214 aa22.35■■□□□ 1.17
LTBP3-211ENST00000528966 ANKRD13CQ8N6S4 541 aa22.35■■□□□ 1.17
LTBP3-211ENST00000528966 ANKRD44Q8N8A2 993 aa22.35■■□□□ 1.17
LTBP3-211ENST00000528966 KLHDC4Q8TBB5 520 aa22.35■■□□□ 1.17
LTBP3-211ENST00000528966 WDR66Q8TBY9 1149 aa22.35■■□□□ 1.17
LTBP3-211ENST00000528966 COA7Q96BR5 231 aa22.35■■□□□ 1.17
LTBP3-211ENST00000528966 SPTBN5Q9NRC6 3674 aaKnown RBP22.34■■□□□ 1.17
LTBP3-211ENST00000528966 PUM3Q15397 648 aaKnown RBP22.34■■□□□ 1.17
LTBP3-211ENST00000528966 NBPF3Q9H094 633 aa22.34■■□□□ 1.17
LTBP3-211ENST00000528966 SPINK5Q9NQ38 1064 aaPredicted RBP22.34■■□□□ 1.17
LTBP3-211ENST00000528966 USP40Q9NVE5 1235 aa22.34■■□□□ 1.17
LTBP3-211ENST00000528966 DNAH12Q6ZR08 3092 aa22.33■■□□□ 1.17
LTBP3-211ENST00000528966 IFIT1P09914 478 aaKnown RBP22.33■■□□□ 1.17
LTBP3-211ENST00000528966 SLURP2P0DP57 97 aa22.33■■□□□ 1.17
LTBP3-211ENST00000528966 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.33■■□□□ 1.17
LTBP3-211ENST00000528966 PLXNB2O15031 1838 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 MYH2Q9UKX2 1941 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 HMGCRP04035 888 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 TRIM32Q13049 653 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 FAM110CQ1W6H9 321 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 CCDC184Q52MB2 194 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 SH3BP5LQ7L8J4 393 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 AGTPBP1Q9UPW5 1226 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 PRUNE2Q8WUY3 3088 aa22.32■■□□□ 1.16
LTBP3-211ENST00000528966 TRIM75PA6NK02 468 aa22.31■■□□□ 1.16
LTBP3-211ENST00000528966 MAP3K10Q02779 954 aa22.31■■□□□ 1.16
LTBP3-211ENST00000528966 TREML2Q5T2D2 321 aa22.31■■□□□ 1.16
LTBP3-211ENST00000528966 CCDC84Q86UT8 332 aaPredicted RBP22.31■■□□□ 1.16
LTBP3-211ENST00000528966 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.31■■□□□ 1.16
LTBP3-211ENST00000528966 UBE2OQ9C0C9 1292 aaKnown RBP22.31■■□□□ 1.16
LTBP3-211ENST00000528966 C11orf49Q9H6J7 331 aa22.31■■□□□ 1.16
LTBP3-211ENST00000528966 RPTORQ8N122 1335 aa22.31■■□□□ 1.16
LTBP3-211ENST00000528966 RFX7Q2KHR2 1363 aa22.3■■□□□ 1.16
LTBP3-211ENST00000528966 ZEB1P37275 1124 aaPredicted RBP22.3■■□□□ 1.16
LTBP3-211ENST00000528966 RGS3P49796 1198 aa22.3■■□□□ 1.16
LTBP3-211ENST00000528966 HMX1Q9NP08 348 aaPredicted RBP22.3■■□□□ 1.16
LTBP3-211ENST00000528966 GJD2Q9UKL4 321 aa22.3■■□□□ 1.16
LTBP3-211ENST00000528966 LOC285556D6RIA3 1793 aa22.3■■□□□ 1.16
LTBP3-211ENST00000528966 NCBP3Q53F19 620 aaKnown RBP22.29■■□□□ 1.16
LTBP3-211ENST00000528966 IDI2Q9BXS1 227 aa22.29■■□□□ 1.16
LTBP3-211ENST00000528966 OGDHLQ9ULD0 1010 aa22.29■■□□□ 1.16
LTBP3-211ENST00000528966 PFASO15067 1338 aa22.29■■□□□ 1.16
LTBP3-211ENST00000528966 CTNND1O60716 968 aaKnown RBP22.28■■□□□ 1.16
LTBP3-211ENST00000528966 ENTPD3O75355 529 aa22.28■■□□□ 1.16
LTBP3-211ENST00000528966 LDHBP07195 334 aaKnown RBP22.28■■□□□ 1.16
LTBP3-211ENST00000528966 LRRFIP2Q9Y608 721 aaKnown RBP22.28■■□□□ 1.16
LTBP3-211ENST00000528966 DDTLA6NHG4 134 aaPredicted RBP22.27■■□□□ 1.16
LTBP3-211ENST00000528966 SLC5A1P13866 664 aa22.27■■□□□ 1.16
LTBP3-211ENST00000528966 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
LTBP3-211ENST00000528966 LPIN2Q92539 896 aa22.27■■□□□ 1.16
LTBP3-211ENST00000528966 TTC28Q96AY4 2481 aa22.27■■□□□ 1.16
LTBP3-211ENST00000528966 ZSCAN29Q8IWY8 852 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-211ENST00000528966 TRIB2Q92519 343 aa22.26■■□□□ 1.15
LTBP3-211ENST00000528966 GUCD1Q96NT3 240 aa22.26■■□□□ 1.15
LTBP3-211ENST00000528966 PNMA3Q9UL41 463 aa22.26■■□□□ 1.15
LTBP3-211ENST00000528966 DDX4Q9NQI0 724 aaKnown RBP22.25■■□□□ 1.15
LTBP3-211ENST00000528966 COL2A1P02458 1487 aaPredicted RBP22.25■■□□□ 1.15
LTBP3-211ENST00000528966 SALL1Q9NSC2 1324 aa22.25■■□□□ 1.15
LTBP3-211ENST00000528966 POTEB2H3BUK9 544 aa22.24■■□□□ 1.15
LTBP3-211ENST00000528966 MAP3K21Q5TCX8 1036 aa22.24■■□□□ 1.15
LTBP3-211ENST00000528966 PROCA1Q8NCQ7 364 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-211ENST00000528966 SALL2Q9Y467 1007 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-211ENST00000528966 GAKO14976 1311 aa22.24■■□□□ 1.15
LTBP3-211ENST00000528966 ATAD5Q96QE3 1844 aa22.24■■□□□ 1.15
LTBP3-211ENST00000528966 EYA2O00167 538 aa22.23■■□□□ 1.15
LTBP3-211ENST00000528966 COL6A1P12109 1028 aa22.23■■□□□ 1.15
LTBP3-211ENST00000528966 RFX5P48382 616 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-211ENST00000528966 GCLCP48506 637 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-211ENST00000528966 MDM2Q00987 491 aaPredicted RBP22.22■■□□□ 1.15
LTBP3-211ENST00000528966 FAM109BQ6ICB4 259 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms