RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PRRG2O14669 202 aa5.64□□□□□ -1.51
CLNS1A-209ENST00000527299 SF3B2Q13435 895 aaKnown RBP5.64□□□□□ -1.51
CLNS1A-209ENST00000527299 TTLL4Q14679 1199 aa5.64□□□□□ -1.51
CLNS1A-209ENST00000527299 USPL1Q5W0Q7 1092 aa5.64□□□□□ -1.51
CLNS1A-209ENST00000527299 LRRC56Q8IYG6 542 aaPredicted RBP5.64□□□□□ -1.51
CLNS1A-209ENST00000527299 PCOLCE2Q9UKZ9 415 aa5.64□□□□□ -1.51
CLNS1A-209ENST00000527299 RNGTTO60942 597 aaKnown RBP5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 ITIH2P19823 946 aa5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 FKBP4Q02790 459 aaKnown RBP eCLIP5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 RPS26P11Q5JNZ5 115 aaPredicted RBP5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 FAM214BQ7L5A3 538 aa5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 ANKLE2Q86XL3 938 aa5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 ASB11Q8WXH4 323 aa5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 LIN37Q96GY3 246 aaPredicted RBP5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 HEXIM2Q96MH2 286 aaKnown RBP5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 ZC3H12CQ9C0D7 883 aaKnown RBP5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 EHD4Q9H223 541 aa5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 KRT82Q9NSB4 513 aa5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 CTNND2Q9UQB3 1225 aa5.63□□□□□ -1.51
CLNS1A-209ENST00000527299 KRT1P04264 644 aa5.62□□□□□ -1.51
CLNS1A-209ENST00000527299 ZSCAN22P10073 491 aaPredicted RBP5.62□□□□□ -1.51
CLNS1A-209ENST00000527299 HCLS1P14317 486 aaPredicted RBP5.62□□□□□ -1.51
CLNS1A-209ENST00000527299 ZP2Q05996 745 aa5.62□□□□□ -1.51
CLNS1A-209ENST00000527299 FYB2Q5VWT5 728 aa5.62□□□□□ -1.51
CLNS1A-209ENST00000527299 TTLL10Q6ZVT0 673 aa5.62□□□□□ -1.51
CLNS1A-209ENST00000527299 ABCB6Q9NP58 842 aa5.62□□□□□ -1.51
CLNS1A-209ENST00000527299 RAPGEFL1Q9UHV5 662 aa5.62□□□□□ -1.51
CLNS1A-209ENST00000527299 B8ZZF3 427 aa5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 NEFMP07197 916 aa5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 GSTP1P09211 210 aaKnown RBP5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 AFMP43652 599 aa5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 FAAP100Q0VG06 881 aa5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 PRPF40BQ6NWY9 871 aaKnown RBP5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 SYDE1Q6ZW31 735 aaPredicted RBP5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 TOP6BLQ8N6T0 577 aa5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 ANP32EQ9BTT0 268 aa5.61□□□□□ -1.51
CLNS1A-209ENST00000527299 TMEM88BA6NKF7 163 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 IGF2BP3O00425 579 aaKnown RBP eCLIP5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 GLI1P08151 1106 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 ZNF157P51786 506 aaPredicted RBP5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 HNRNPUQ00839 825 aaKnown RBP eCLIP5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 IKZF1Q13422 519 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 ECM1Q16610 540 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 PRR23BQ6ZRT6 265 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 SPACA3Q8IXA5 215 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 ISL2Q96A47 359 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 NPHS2Q9NP85 383 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 LMCD1Q9NZU5 365 aa5.6□□□□□ -1.51
CLNS1A-209ENST00000527299 TMEM238LA0A1B0GVL6 79 aa5.59□□□□□ -1.51
CLNS1A-209ENST00000527299 NEFLP07196 543 aa5.59□□□□□ -1.51
CLNS1A-209ENST00000527299 C1QTNF9P0C862 333 aa5.59□□□□□ -1.51
CLNS1A-209ENST00000527299 NKPD1Q17RQ9 610 aa5.59□□□□□ -1.51
CLNS1A-209ENST00000527299 AMIGO3Q86WK7 504 aa5.59□□□□□ -1.51
CLNS1A-209ENST00000527299 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.59□□□□□ -1.51
CLNS1A-209ENST00000527299 BUD31P41223 144 aaPredicted RBP5.58□□□□□ -1.52
CLNS1A-209ENST00000527299 ZC3H12AQ5D1E8 599 aaKnown RBP5.58□□□□□ -1.52
CLNS1A-209ENST00000527299 PDZD3Q86UT5 571 aa5.58□□□□□ -1.52
CLNS1A-209ENST00000527299 RNF214Q8ND24 703 aa5.58□□□□□ -1.52
CLNS1A-209ENST00000527299 UBE2Q2Q8WVN8 375 aa5.58□□□□□ -1.52
CLNS1A-209ENST00000527299 GTF2IRD1Q9UHL9 959 aa5.58□□□□□ -1.52
CLNS1A-209ENST00000527299 MTMR7Q9Y216 660 aa5.58□□□□□ -1.52
CLNS1A-209ENST00000527299 PITPNM2Q9BZ72 1349 aa5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 CPNE3O75131 537 aaKnown RBP5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 ERVK-24P63145 666 aa5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 ORC1Q13415 861 aa5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 PHLDB3Q6NSJ2 640 aa5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 MPZL3Q6UWV2 235 aa5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 KIRREL1Q96J84 757 aa5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 KRTAP17-1Q9BYP8 105 aa5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 SSU72Q9NP77 194 aaKnown RBP5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 ANO2Q9NQ90 1003 aa5.57□□□□□ -1.52
CLNS1A-209ENST00000527299 NFIBO00712 420 aa5.56□□□□□ -1.52
CLNS1A-209ENST00000527299 CLCN7P51798 805 aa5.56□□□□□ -1.52
CLNS1A-209ENST00000527299 ZNF211Q13398 564 aaPredicted RBP5.56□□□□□ -1.52
CLNS1A-209ENST00000527299 TMEM67Q5HYA8 995 aa5.56□□□□□ -1.52
CLNS1A-209ENST00000527299 CYFIP1Q7L576 1253 aa5.56□□□□□ -1.52
CLNS1A-209ENST00000527299 FBXO15Q8NCQ5 510 aaPredicted RBP5.56□□□□□ -1.52
CLNS1A-209ENST00000527299 KCNB2Q92953 911 aa5.56□□□□□ -1.52
CLNS1A-209ENST00000527299 C19orf73Q9NVV2 129 aa5.56□□□□□ -1.52
CLNS1A-209ENST00000527299 ABL1P00519 1130 aa5.55□□□□□ -1.52
CLNS1A-209ENST00000527299 CCDC74AQ96AQ1 378 aa5.55□□□□□ -1.52
CLNS1A-209ENST00000527299 CCDC97Q96F63 343 aaPredicted RBP5.55□□□□□ -1.52
CLNS1A-209ENST00000527299 PRDM10Q9NQV6 1147 aa5.55□□□□□ -1.52
CLNS1A-209ENST00000527299 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
CLNS1A-209ENST00000527299 SERPINA10Q9UK55 444 aa5.55□□□□□ -1.52
CLNS1A-209ENST00000527299 TRAK1Q9UPV9 953 aa5.55□□□□□ -1.52
CLNS1A-209ENST00000527299 ZEB1P37275 1124 aaPredicted RBP5.54□□□□□ -1.52
CLNS1A-209ENST00000527299 PPP2R3AQ06190 1150 aa5.54□□□□□ -1.52
CLNS1A-209ENST00000527299 STK35Q8TDR2 534 aa5.54□□□□□ -1.52
CLNS1A-209ENST00000527299 BRPF3Q9ULD4 1205 aa5.54□□□□□ -1.52
CLNS1A-209ENST00000527299 NPIPB6E9PJ23 425 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 ICMTO60725 284 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 EOMESO95936 686 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 NTF4P34130 210 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 GDNFP39905 211 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 GRM2Q14416 872 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 FAM129BQ96TA1 746 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 DNAJC25Q9H1X3 360 aa5.53□□□□□ -1.52
CLNS1A-209ENST00000527299 CARS2Q9HA77 564 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms