RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
CLNS1A-207ENST00000527133 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
CLNS1A-207ENST00000527133 CUL9Q8IWT3 2517 aa16.28■□□□□ 0.2
CLNS1A-207ENST00000527133 PHF20L1A8MW92 1017 aa16.28■□□□□ 0.2
CLNS1A-207ENST00000527133 LDHBP07195 334 aaKnown RBP16.28■□□□□ 0.2
CLNS1A-207ENST00000527133 SMCR8Q8TEV9 937 aaPredicted RBP16.28■□□□□ 0.2
CLNS1A-207ENST00000527133 LPIN2Q92539 896 aa16.28■□□□□ 0.2
CLNS1A-207ENST00000527133 ATRNL1Q5VV63 1379 aa16.27■□□□□ 0.2
CLNS1A-207ENST00000527133 EYA2O00167 538 aa16.27■□□□□ 0.2
CLNS1A-207ENST00000527133 PTPRAP18433 802 aa16.27■□□□□ 0.2
CLNS1A-207ENST00000527133 IRF5Q13568 498 aa16.27■□□□□ 0.2
CLNS1A-207ENST00000527133 PXYLP1Q8TE99 480 aa16.27■□□□□ 0.2
CLNS1A-207ENST00000527133 AFG3L2Q9Y4W6 797 aa16.27■□□□□ 0.2
CLNS1A-207ENST00000527133 RGS3P49796 1198 aa16.26■□□□□ 0.19
CLNS1A-207ENST00000527133 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
CLNS1A-207ENST00000527133 PAWRQ96IZ0 340 aaKnown RBP16.26■□□□□ 0.19
CLNS1A-207ENST00000527133 PAK6Q9NQU5 681 aaPredicted RBP16.26■□□□□ 0.19
CLNS1A-207ENST00000527133 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
CLNS1A-207ENST00000527133 DOCK2Q92608 1830 aa16.26■□□□□ 0.19
CLNS1A-207ENST00000527133 UNC80Q8N2C7 3258 aa16.25■□□□□ 0.19
CLNS1A-207ENST00000527133 TRIM75PA6NK02 468 aa16.25■□□□□ 0.19
CLNS1A-207ENST00000527133 RFX5P48382 616 aaPredicted RBP16.25■□□□□ 0.19
CLNS1A-207ENST00000527133 DIS3LQ8TF46 1054 aaKnown RBP16.25■□□□□ 0.19
CLNS1A-207ENST00000527133 CRISPLD2Q9H0B8 497 aa16.25■□□□□ 0.19
CLNS1A-207ENST00000527133 USP44Q9H0E7 712 aa16.25■□□□□ 0.19
CLNS1A-207ENST00000527133 LRRFIP2Q9Y608 721 aaKnown RBP16.25■□□□□ 0.19
CLNS1A-207ENST00000527133 ENTPD3O75355 529 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 SLURP2P0DP57 97 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 CAPN2P17655 700 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 ATP2B3Q16720 1220 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 SH3BP5LQ7L8J4 393 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 ATG9AQ7Z3C6 839 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 NECAB2Q7Z6G3 386 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 MRPL50Q8N5N7 158 aaKnown RBP16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 ANKRD13CQ8N6S4 541 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 COA7Q96BR5 231 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 IDI2Q9BXS1 227 aa16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 GNL3LQ9NVN8 582 aaKnown RBP16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.24■□□□□ 0.19
CLNS1A-207ENST00000527133 SALL1Q9NSC2 1324 aa16.23■□□□□ 0.19
CLNS1A-207ENST00000527133 CCDC84Q86UT8 332 aaPredicted RBP16.23■□□□□ 0.19
CLNS1A-207ENST00000527133 C7orf61Q8IZ16 206 aa16.23■□□□□ 0.19
CLNS1A-207ENST00000527133 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLNS1A-207ENST00000527133 SIL1Q9H173 461 aa16.23■□□□□ 0.19
CLNS1A-207ENST00000527133 AGTPBP1Q9UPW5 1226 aa16.23■□□□□ 0.19
CLNS1A-207ENST00000527133 PTPRCP08575 1304 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 PTPRFP10586 1907 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 ALPK3Q96L96 1907 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 DDTLA6NHG4 134 aaPredicted RBP16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 PHKA1P46020 1223 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 PICALMQ13492 652 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 TREML2Q5T2D2 321 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 DENND2AQ9ULE3 1009 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 ZMYND8Q9ULU4 1186 aaPredicted RBP16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 DOCK1Q14185 1865 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 RFX7Q2KHR2 1363 aa16.22■□□□□ 0.19
CLNS1A-207ENST00000527133 CTNND1O60716 968 aaKnown RBP16.21■□□□□ 0.19
CLNS1A-207ENST00000527133 MAP3K10Q02779 954 aa16.21■□□□□ 0.19
CLNS1A-207ENST00000527133 DZIP1Q86YF9 867 aaKnown RBP16.21■□□□□ 0.19
CLNS1A-207ENST00000527133 GDF15Q99988 308 aa16.21■□□□□ 0.19
CLNS1A-207ENST00000527133 DDX4Q9NQI0 724 aaKnown RBP16.21■□□□□ 0.19
CLNS1A-207ENST00000527133 CEP126Q9P2H0 1117 aa16.21■□□□□ 0.19
CLNS1A-207ENST00000527133 LAMA2P24043 3122 aaKnown RBP16.21■□□□□ 0.19
CLNS1A-207ENST00000527133 DOCK3Q8IZD9 2030 aa16.21■□□□□ 0.18
CLNS1A-207ENST00000527133 GAKO14976 1311 aa16.2■□□□□ 0.18
CLNS1A-207ENST00000527133 PHIPQ8WWQ0 1821 aa16.2■□□□□ 0.18
CLNS1A-207ENST00000527133 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
CLNS1A-207ENST00000527133 SEMA3EO15041 775 aa16.2■□□□□ 0.18
CLNS1A-207ENST00000527133 BMP8BP34820 402 aa16.2■□□□□ 0.18
CLNS1A-207ENST00000527133 FAM110CQ1W6H9 321 aa16.2■□□□□ 0.18
CLNS1A-207ENST00000527133 DEFB123Q8N688 67 aa16.2■□□□□ 0.18
CLNS1A-207ENST00000527133 PNMA3Q9UL41 463 aa16.2■□□□□ 0.18
CLNS1A-207ENST00000527133 CIAO1O76071 339 aa16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 HMGCRP04035 888 aa16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 ADORA1P30542 326 aa16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 BTDP43251 543 aa16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 MNX1P50219 401 aaPredicted RBP16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 Q7L0L9 218 aa16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 ZGPATQ8N5A5 531 aaKnown RBP16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 ANKLE1Q8NAG6 615 aa16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 ABCF2Q9UG63 623 aa16.19■□□□□ 0.18
CLNS1A-207ENST00000527133 FAM196BA6NMK8 535 aa16.18■□□□□ 0.18
CLNS1A-207ENST00000527133 SYN1P17600 705 aa16.18■□□□□ 0.18
CLNS1A-207ENST00000527133 TRIM32Q13049 653 aa16.18■□□□□ 0.18
CLNS1A-207ENST00000527133 SSH1Q8WYL5 1049 aa16.18■□□□□ 0.18
CLNS1A-207ENST00000527133 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
CLNS1A-207ENST00000527133 SPP2Q13103 211 aa16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 RASGRF1Q13972 1273 aa16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 GPR153Q6NV75 609 aa16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 SLF2Q8IX21 1173 aa16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 PROCA1Q8NCQ7 364 aaPredicted RBP16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 HMX1Q9NP08 348 aaPredicted RBP16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 RPTORQ8N122 1335 aa16.17■□□□□ 0.18
CLNS1A-207ENST00000527133 DNAH12Q6ZR08 3092 aa16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 MAGEA10P43363 369 aaPredicted RBP16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 GCLCP48506 637 aaPredicted RBP16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 HMGCS2P54868 508 aa16.16■□□□□ 0.18
CLNS1A-207ENST00000527133 FAM9BQ8IZU0 186 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms